ATCG00300 : YCF9
Query Information
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AGICode ATCG00300
Description YCF9
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 ATCG00300 YCF9 YCF9 1 0.29 -0.29
2 ATCG00280 photosystem II reaction center protein C photosystem II reaction center
protein C		 0.81 0.29 -0.3
3 ATCG00820 ribosomal protein S19 ribosomal protein S19 0.81 0.31 -0.32
4 ATCG00050 ribosomal protein S16 ribosomal protein S16 0.8 0.3 -0.31
5 ATCG00670 plastid-encoded CLP P CASEINOLYTIC PROTEASE P 1,
plastid-encoded CLP P		 0.8 0.32 -0.33
6 ATCG00040 maturase K maturase K 0.8 0.3 -0.33
7 ATCG01120 chloroplast ribosomal protein S15 chloroplast ribosomal protein S15 0.79 0.29 -0.33
8 ATCG00180 DNA-directed RNA polymerase family protein RPOC1 0.78 0.32 -0.32
9 ATCG00160 ribosomal protein S2 ribosomal protein S2 0.78 0.35 -0.32
10 ATCG01090 NADPH dehydrogenases NDHI 0.77 0.33 -0.32
11 ATCG01100 NADH dehydrogenase family protein NDHA 0.76 0.33 -0.33
12 AT2G22480 phosphofructokinase 5 phosphofructokinase 5 -0.76 0.32 -0.32
13 ATCG00650 ribosomal protein S18 ribosomal protein S18 0.75 0.32 -0.3
14 AT2G38700 mevalonate diphosphate decarboxylase 1 ATMVD1, mevalonate diphosphate
decarboxylase 1		 -0.75 0.32 -0.31
15 ATCG01040 Cytochrome C assembly protein YCF5 0.75 0.31 -0.32
16 ATCG00340 Photosystem I, PsaA/PsaB protein PSAB 0.75 0.3 -0.33
17 ATCG00510 photsystem I subunit I photsystem I subunit I 0.75 0.3 -0.32
18 AT1G70690 Receptor-like protein kinase-related family protein HOPW1-1-INDUCED GENE1,
PLASMODESMATA-LOCATED PROTEIN 5		 -0.74 0.31 -0.29
19 ATCG00270 photosystem II reaction center protein D photosystem II reaction center
protein D		 0.74 0.31 -0.32
20 AT2G35800 mitochondrial substrate carrier family protein S-adenosyl methionine
transporter-like		 0.74 0.31 -0.34
21 AT1G09100 26S proteasome AAA-ATPase subunit RPT5B 26S proteasome AAA-ATPase subunit
RPT5B		 -0.73 0.32 -0.32
22 ATCG00540 photosynthetic electron transfer A photosynthetic electron transfer A 0.73 0.32 -0.31
23 AT3G25500 formin homology 1 formin homology 1, AHF1,
ARABIDOPSIS THALIANA FORMIN
HOMOLOGY 1, FORMIN HOMOLOGY 1		 0.73 0.32 -0.31
24 ATCG00120 ATP synthase subunit alpha ATP synthase subunit alpha 0.73 0.32 -0.31
25 AT2G24200 Cytosol aminopeptidase family protein -0.73 0.3 -0.32
26 AT1G63850 BTB/POZ domain-containing protein 0.72 0.33 -0.32
27 ATCG00800 structural constituent of ribosome 0.72 0.32 -0.32
28 AT5G03630 Pyridine nucleotide-disulphide oxidoreductase family
protein		 ATMDAR2 -0.71 0.3 -0.33
29 AT1G09740 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.71 0.31 -0.29
30 AT2G14750 APS kinase APS KINASE 1, APS kinase,
ADENOSINE-5'-PHOSPHOSULFATE (APS)
KINASE 1, ATAKN1		 -0.71 0.33 -0.32
31 AT3G54840 Ras-related small GTP-binding family protein ARA-6, ARA6, ATRAB5C, ATRABF1,
RABF1		 -0.71 0.31 -0.31
32 AT3G30775 Methylenetetrahydrofolate reductase family protein AT-POX, ATPDH, ARABIDOPSIS
THALIANA PROLINE OXIDASE, EARLY
RESPONSIVE TO DEHYDRATION 5,
proline dehydrogenase 1, PRO1,
PROLINE DEHYDROGENASE		 -0.7 0.31 -0.34
33 AT5G13000 glucan synthase-like 12 glucan synthase-like 12, callose
synthase 3, gsl12, glucan
synthase-like 12		 0.7 0.32 -0.32
34 AT2G01650 plant UBX domain-containing protein 2 plant UBX domain-containing
protein 2		 -0.7 0.32 -0.35
35 AT5G56860 GATA type zinc finger transcription factor family protein GATA TRANSCRIPTION FACTOR 21,
GATA, nitrate-inducible, carbon
metabolism-involved		 0.7 0.31 -0.32
36 AT3G59760 O-acetylserine (thiol) lyase isoform C ARABIDOPSIS THALIANA
CYSTEINSYNTHASE-C, O-acetylserine
(thiol) lyase isoform C		 -0.7 0.33 -0.33
37 AT2G25280 CONTAINS InterPro DOMAIN/s: UPF0103/Mediator of
ErbB2-driven cell motility (Memo), related
(InterPro:IPR002737); Has 1074 Blast hits to 1072 proteins
in 474 species: Archae - 213; Bacteria - 366; Metazoa -
159; Fungi - 135; Plants - 54; Viruses - 0; Other
Eukaryotes - 147 (source: NCBI BLink).		 -0.7 0.32 -0.3
38 ATCG00740 RNA polymerase subunit alpha RNA polymerase subunit alpha 0.69 0.31 -0.3
39 AT5G16050 general regulatory factor 5 GF14 UPSILON, general regulatory
factor 5		 -0.69 0.32 -0.32
40 ATCG01050 NADH-Ubiquinone/plastoquinone (complex I) protein NDHD 0.69 0.35 -0.3
41 AT4G30530 Class I glutamine amidotransferase-like superfamily protein gamma-glutamyl peptidase 1 -0.69 0.32 -0.33
42 AT4G02980 endoplasmic reticulum auxin binding protein 1 ABP, endoplasmic reticulum auxin
binding protein 1		 -0.69 0.32 -0.3
43 ATCG00710 photosystem II reaction center protein H photosystem II reaction center
protein H		 0.69 0.32 -0.31
44 AT1G16670 Protein kinase superfamily protein -0.69 0.31 -0.31
45 AT5G35080 INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Mannose-6-phosphate receptor, binding
(InterPro:IPR009011), Glucosidase II beta subunit-like
(InterPro:IPR012913); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.68 0.31 -0.32
46 ATCG00720 photosynthetic electron transfer B photosynthetic electron transfer B 0.68 0.31 -0.33
47 AT5G27380 glutathione synthetase 2 glutathione synthetase 2, GSHB -0.68 0.3 -0.31
48 AT5G47240 nudix hydrolase homolog 8 nudix hydrolase homolog 8, nudix
hydrolase homolog 8		 -0.68 0.3 -0.3
49 AT1G03950 vacuolar protein sorting-associated protein 2.3 vacuolar protein
sorting-associated protein 2.3		 -0.68 0.33 -0.32
50 AT5G48000 cytochrome P450, family 708, subfamily A, polypeptide 2 CYTOCHROME P450, FAMILY 708,
SUBFAMILY A, POLYPEPTIDE 2,
cytochrome P450, family 708,
subfamily A, polypeptide 2,
THALIANOL HYDROXYLASE, THALIANOL
HYDROXYLASE 1		 -0.67 0.3 -0.32
51 AT1G10700 phosphoribosyl pyrophosphate (PRPP) synthase 3 phosphoribosyl pyrophosphate
(PRPP) synthase 3		 -0.67 0.33 -0.34
52 AT1G28680 HXXXD-type acyl-transferase family protein -0.67 0.3 -0.33
53 ATCG00530 CemA-like proton extrusion protein-related YCF10 0.67 0.31 -0.32
54 AT3G10260 Reticulon family protein -0.67 0.32 -0.31
55 AT1G15400 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast
hits to 82 proteins in 16 species: Archae - 0; Bacteria -
4; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other
Eukaryotes - 3 (source: NCBI BLink).		 -0.67 0.33 -0.31
56 AT5G11500 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF814 (InterPro:IPR008532); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.67 0.31 -0.3
57 AT1G55540 Nuclear pore complex protein 0.67 0.32 -0.29
58 AT4G16340 guanyl-nucleotide exchange factors;GTPase binding;GTP
binding		 SPIKE1 0.66 0.31 -0.31
59 ATCG00600 PETG PETG 0.66 0.31 -0.31
60 ATCG00630 PSAJ PSAJ 0.66 0.32 -0.33
61 AT5G23830 MD-2-related lipid recognition domain-containing protein -0.66 0.3 -0.31
62 AT5G54390 HAL2-like HAL2-like, ATAHL, HAL2-like -0.66 0.32 -0.31
63 ATCG00070 photosystem II reaction center protein K precursor photosystem II reaction center
protein K precursor		 0.66 0.32 -0.3
64 AT1G71860 protein tyrosine phosphatase 1 ATPTP1, protein tyrosine
phosphatase 1		 -0.66 0.32 -0.31
65 AT2G19570 cytidine deaminase 1 AT-CDA1, cytidine deaminase 1,
DESZ		 -0.66 0.33 -0.33
66 ATCG00750 ribosomal protein S11 ribosomal protein S11 0.66 0.34 -0.32
67 AT2G36120 Glycine-rich protein family DEFECTIVELY ORGANIZED TRIBUTARIES
1		 -0.66 0.3 -0.31
68 ATCG00360 Tetratricopeptide repeat (TPR)-like superfamily protein YCF3 0.66 0.3 -0.31
69 AT2G24540 Galactose oxidase/kelch repeat superfamily protein ATTENUATED FAR-RED RESPONSE 0.66 0.32 -0.31
70 AT1G62200 Major facilitator superfamily protein AtPTR6, peptide transporter 6 -0.66 0.32 -0.32
71 ATCG00810 ribosomal protein L22 ribosomal protein L22 0.66 0.32 -0.31
72 AT3G55480 protein affected trafficking 2 beta-subunit of adaptor protein
complex 3, protein affected
trafficking 2		 0.66 0.3 -0.31
73 ATCG00170 DNA-directed RNA polymerase family protein RPOC2 0.65 0.3 -0.29
74 ATCG00590 electron carriers ORF31 0.65 0.33 -0.31
75 ATCG00660 ribosomal protein L20 ribosomal protein L20 0.65 0.3 -0.31
76 AT5G47040 lon protease 2 lon protease 2 0.65 0.31 -0.33
77 AT1G62660 Glycosyl hydrolases family 32 protein -0.65 0.31 -0.3
78 AT1G12140 flavin-monooxygenase glucosinolate S-oxygenase 5 flavin-monooxygenase glucosinolate
S-oxygenase 5		 -0.65 0.29 -0.3
79 ATCG00080 photosystem II reaction center protein I photosystem II reaction center
protein I		 0.65 0.31 -0.32
80 AT4G26310 elongation factor P (EF-P) family protein -0.65 0.33 -0.32
81 ATCG00780 ribosomal protein L14 ribosomal protein L14 0.65 0.29 -0.31
82 ATCG00790 ribosomal protein L16 ribosomal protein L16 0.64 0.32 -0.32
83 AT3G17420 glyoxysomal protein kinase 1 glyoxysomal protein kinase 1 -0.64 0.31 -0.3
84 AT1G53210 sodium/calcium exchanger family protein / calcium-binding
EF hand family protein		 0.64 0.31 -0.3
85 AT4G04320 malonyl-CoA decarboxylase family protein -0.64 0.31 -0.34
86 ATCG00700 photosystem II reaction center protein N photosystem II reaction center
protein N		 0.64 0.31 -0.33
87 AT1G01820 peroxin 11c peroxin 11c -0.64 0.34 -0.34
88 AT3G27890 NADPH:quinone oxidoreductase NADPH:quinone oxidoreductase -0.64 0.29 -0.32
89 AT1G53090 SPA1-related 4 SPA1-related 4 0.64 0.32 -0.3
90 AT5G64240 metacaspase 3 metacaspase 3, metacaspase 1a,
metacaspase 3, metacaspase 1a		 -0.64 0.29 -0.31
91 AT3G55690 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G39870.1); Has 76 Blast hits
to 69 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 4; Fungi - 3; Plants - 69; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.63 0.31 -0.3
92 AT4G24350 Phosphorylase superfamily protein -0.63 0.34 -0.32
93 AT5G01500 thylakoid ATP/ADP carrier thylakoid ATP/ADP carrier -0.63 0.33 -0.31
94 AT3G09490 Tetratricopeptide repeat (TPR)-like superfamily protein -0.63 0.32 -0.34
95 AT4G31300 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
superfamily protein		 PBA1 -0.63 0.32 -0.31
96 AT3G51490 tonoplast monosaccharide transporter3 tonoplast monosaccharide
transporter3		 0.63 0.31 -0.31
97 AT5G37070 Protein of unknown function, DUF538 -0.63 0.29 -0.31
98 AT4G14110 COP9 signalosome, subunit CSN8 CONSTITUTIVE PHOTOMORPHOGENIC 9,
COP9 SIGNALOSOME SUBUNIT 8, EMBRYO
DEFECTIVE 143, FUSCA 7		 -0.63 0.3 -0.3
99 AT5G40070 MADS-box family protein 0.63 0.32 -0.32
100 AT5G03450 Transducin/WD40 repeat-like superfamily protein 0.63 0.3 -0.31
101 AT1G06740 transposable element gene 0.63 0.32 -0.29
102 AT4G39940 APS-kinase 2 APS-kinase 2,
ADENOSINE-5'-PHOSPHOSULFATE (APS)
KINASE 2		 -0.63 0.32 -0.31
103 ATCG01110 NAD(P)H dehydrogenase subunit H NAD(P)H dehydrogenase subunit H 0.63 0.31 -0.31
104 AT3G63080 glutathione peroxidase 5 glutathione peroxidase 5,
glutathione peroxidase 5, maternal
effect embryo arrest 42		 -0.62 0.3 -0.33
105 AT2G03800 D-aminoacyl-tRNA deacylases GEKO1 -0.62 0.33 -0.32
106 AT1G66800 NAD(P)-binding Rossmann-fold superfamily protein -0.62 0.3 -0.32
107 AT2G05260 alpha/beta-Hydrolases superfamily protein -0.62 0.3 -0.32
108 AT5G45010 DSS1 homolog on chromosome V DSS1 homolog on chromosome V, DSS1
homolog on chromosome V		 -0.62 0.33 -0.29
109 AT5G22950 SNF7 family protein VPS24.1 -0.62 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
110 C0135 Kaempferol-hexosyl-dirhamnoside - - - -0.79 0.42 -0.44
111 C0136 Lactic acid D,L-Lactic acid Lactate pyruvate fermentation to lactate -0.76 0.45 -0.47 C0136