AT4G17720 : -
Query Information
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AGICode AT4G17720
Description RNA-binding (RRM/RBD/RNP motifs) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G17720 RNA-binding (RRM/RBD/RNP motifs) family protein 1 0.32 -0.33
2 AT3G59360 UDP-galactose transporter 6 UDP-GALACTOSE TRANSPORTER 6,
UDP-galactose transporter 6		 0.79 0.33 -0.32
3 AT5G40420 oleosin 2 OLEOSIN 2, oleosin 2 -0.78 0.34 -0.31
4 AT1G21920 Histone H3 K4-specific methyltransferase SET7/9 family
protein		 -0.77 0.32 -0.35
5 AT1G54870 NAD(P)-binding Rossmann-fold superfamily protein -0.77 0.31 -0.34
6 AT4G14800 20S proteasome beta subunit D2 20S proteasome beta subunit D2 0.77 0.31 -0.33
7 AT1G30630 Coatomer epsilon subunit 0.75 0.3 -0.33
8 AT1G14000 VH1-interacting kinase VH1-interacting kinase 0.75 0.32 -0.31
9 AT2G31980 PHYTOCYSTATIN 2 PHYTOCYSTATIN 2, PHYTOCYSTATIN 2 -0.75 0.32 -0.32
10 AT2G28490 RmlC-like cupins superfamily protein -0.75 0.35 -0.32
11 AT3G47600 myb domain protein 94 myb domain protein 94, ATMYBCP70,
myb domain protein 94		 -0.74 0.3 -0.32
12 AT5G46230 Protein of unknown function, DUF538 0.74 0.3 -0.32
13 AT1G63000 nucleotide-rhamnose synthase/epimerase-reductase nucleotide-rhamnose
synthase/epimerase-reductase,
UDP-4-KETO-6-DEOXY-D-GLUCOSE-3,5-E
PIMERASE-4-REDUCTASE 1		 0.73 0.32 -0.32
14 AT1G09210 calreticulin 1b AtCRT1b, calreticulin 1b 0.73 0.32 -0.34
15 AT5G62360 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.73 0.34 -0.32
16 AT5G37600 glutamine synthase clone R1 ARABIDOPSIS GLUTAMINE SYNTHASE
1;1, ARABIDOPSIS THALIANA
GLUTAMINE SYNTHASE CLONE R1,
GLUTAMINE SYNTHASE 1;1, glutamine
synthase clone R1		 0.73 0.31 -0.31
17 AT4G00330 calmodulin-binding receptor-like cytoplasmic kinase 2 calmodulin-binding receptor-like
cytoplasmic kinase 2		 0.73 0.3 -0.32
18 AT3G10740 alpha-L-arabinofuranosidase 1 ALPHA-L-ARABINOFURANOSIDASE,
ALPHA-L-ARABINOFURANOSIDASE 1,
alpha-L-arabinofuranosidase 1,
ARABIDOPSIS THALIANA
ALPHA-L-ARABINOFURANOSIDASE 1		 -0.72 0.3 -0.32
19 AT1G60160 Potassium transporter family protein -0.72 0.32 -0.32
20 AT2G32970 unknown protein; Has 158 Blast hits to 154 proteins in 73
species: Archae - 0; Bacteria - 61; Metazoa - 0; Fungi - 0;
Plants - 55; Viruses - 28; Other Eukaryotes - 14 (source:
NCBI BLink).		 -0.72 0.34 -0.33
21 AT2G46690 SAUR-like auxin-responsive protein family -0.72 0.33 -0.32
22 AT1G44760 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.71 0.32 -0.32
23 AT4G16160 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 ATOEP16-2, ATOEP16-S -0.71 0.31 -0.32
24 AT3G56410 Protein of unknown function (DUF3133) 0.71 0.32 -0.3
25 AT2G32580 Protein of unknown function (DUF1068) 0.71 0.31 -0.31
26 AT3G19100 Protein kinase superfamily protein -0.7 0.33 -0.3
27 AT1G02360 Chitinase family protein 0.7 0.3 -0.32
28 AT4G37790 Homeobox-leucine zipper protein family HAT22 -0.7 0.29 -0.32
29 AT1G21080 DNAJ heat shock N-terminal domain-containing protein 0.7 0.31 -0.31
30 AT2G30500 Kinase interacting (KIP1-like) family protein -0.7 0.28 -0.3
31 AT5G56100 glycine-rich protein / oleosin -0.69 0.3 -0.32
32 AT4G34030 3-methylcrotonyl-CoA carboxylase 3-methylcrotonyl-CoA carboxylase -0.69 0.34 -0.3
33 AT3G17420 glyoxysomal protein kinase 1 glyoxysomal protein kinase 1 0.69 0.32 -0.32
34 AT3G07090 PPPDE putative thiol peptidase family protein 0.69 0.32 -0.31
35 AT5G54740 seed storage albumin 5 seed storage albumin 5 -0.69 0.28 -0.33
36 AT2G25270 unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN:
18 plant structures; EXPRESSED DURING: 13 growth stages;
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G12400.1); Has 35333 Blast hits to 34131 proteins
in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink).		 -0.69 0.33 -0.33
37 AT5G45550 Mob1/phocein family protein MOB1-like 0.69 0.32 -0.3
38 AT2G03510 SPFH/Band 7/PHB domain-containing membrane-associated
protein family		 0.69 0.29 -0.33
39 AT4G04210 plant UBX domain containing protein 4 plant UBX domain containing
protein 4		 0.69 0.33 -0.3
40 AT3G24503 aldehyde dehydrogenase 2C4 aldehyde dehydrogenase 1A,
aldehyde dehydrogenase 2C4,
REDUCED EPIDERMAL FLUORESCENCE1		 0.69 0.33 -0.34
41 AT5G05550 sequence-specific DNA binding transcription factors -0.69 0.31 -0.31
42 AT1G73190 Aquaporin-like superfamily protein ALPHA-TONOPLAST INTRINSIC PROTEIN,
TIP3;1		 -0.69 0.32 -0.31
43 AT2G21820 unknown protein; Has 45 Blast hits to 45 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.69 0.34 -0.32
44 AT1G53850 20S proteasome alpha subunit E1 ARABIDOPSIS 20S PROTEASOME ALPHA
SUBUNIT E1, 20S proteasome alpha
subunit E1		 0.68 0.35 -0.32
45 AT4G29740 cytokinin oxidase 4 ATCKX4, cytokinin oxidase 4 0.68 0.31 -0.33
46 AT5G54980 Uncharacterised protein family (UPF0497) -0.68 0.31 -0.3
47 AT5G03230 Protein of unknown function, DUF584 -0.68 0.31 -0.31
48 AT1G28680 HXXXD-type acyl-transferase family protein 0.68 0.31 -0.31
49 AT5G07710 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.68 0.32 -0.33
50 AT5G13980 Glycosyl hydrolase family 38 protein -0.68 0.32 -0.33
51 AT3G51810 Stress induced protein AT3, ARABIDOPSIS THALIANA LATE
EMBRYOGENESIS ABUNDANT 1, LATE
EMBRYOGENESIS ABUNDANT 1, GUANINE
NUCLEOTIDE EXCHANGE FACTOR FOR ADP
RIBOSYLATION FACTORS 1		 -0.68 0.32 -0.33
52 AT1G60860 ARF-GAP domain 2 ARF-GAP domain 2 -0.68 0.3 -0.32
53 AT4G11850 phospholipase D gamma 1 maternal effect embryo arrest 54,
phospholipase D gamma 1		 0.68 0.3 -0.31
54 AT2G45620 Nucleotidyltransferase family protein -0.68 0.34 -0.32
55 AT5G45510 Leucine-rich repeat (LRR) family protein 0.67 0.33 -0.29
56 AT1G80910 Protein of unknown function (DUF1712) 0.67 0.31 -0.32
57 AT3G56110 prenylated RAB acceptor 1.B1 prenylated RAB acceptor 1.B1 0.67 0.32 -0.32
58 AT1G15330 Cystathionine beta-synthase (CBS) protein -0.67 0.3 -0.3
59 AT1G28330 dormancy-associated protein-like 1 DORMANCY-ASSOCIATED PROTEIN 1,
dormancy-associated protein-like 1		 -0.67 0.34 -0.31
60 AT5G59960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.67 0.3 -0.28
61 AT1G03520 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.67 0.29 -0.31
62 AT3G43920 dicer-like 3 DICER-LIKE 3, dicer-like 3 -0.67 0.32 -0.3
63 AT1G03090 methylcrotonyl-CoA carboxylase alpha chain, mitochondrial /
3-methylcrotonyl-CoA carboxylase 1 (MCCA)		 MCCA -0.67 0.33 -0.3
64 AT5G64813 Ras-related small GTP-binding family protein Light Insensitive Period1 0.67 0.31 -0.3
65 AT5G43310 COP1-interacting protein-related -0.67 0.32 -0.32
66 AT1G43640 tubby like protein 5 tubby like protein 5, tubby like
protein 5		 0.66 0.3 -0.31
67 AT4G24800 MA3 domain-containing protein EIN2 C-terminus Interacting
Protein 1		 -0.66 0.32 -0.3
68 AT1G22690 Gibberellin-regulated family protein 0.66 0.31 -0.32
69 AT1G22430 GroES-like zinc-binding dehydrogenase family protein -0.66 0.3 -0.31
70 AT2G29300 NAD(P)-binding Rossmann-fold superfamily protein -0.66 0.31 -0.3
71 AT1G62290 Saposin-like aspartyl protease family protein -0.66 0.33 -0.3
72 AT3G19920 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G64230.1); Has 217 Blast hits
to 217 proteins in 16 species: Archae - 0; Bacteria - 2;
Metazoa - 0; Fungi - 0; Plants - 215; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.66 0.34 -0.3
73 AT4G25140 oleosin 1 OLEOSIN 1, oleosin 1 -0.66 0.29 -0.31
74 AT5G15900 TRICHOME BIREFRINGENCE-LIKE 19 TRICHOME BIREFRINGENCE-LIKE 19 0.65 0.31 -0.31
75 AT4G10120 Sucrose-phosphate synthase family protein ATSPS4F 0.65 0.32 -0.33
76 AT4G18590 Nucleic acid-binding, OB-fold-like protein -0.65 0.34 -0.3
77 AT1G04800 glycine-rich protein 0.65 0.32 -0.32
78 AT1G28100 unknown protein; Has 64 Blast hits to 64 proteins in 27
species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 6;
Plants - 42; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.65 0.33 -0.33
79 AT5G55240 ARABIDOPSIS THALIANA PEROXYGENASE 2 ARABIDOPSIS THALIANA PEROXYGENASE
2		 -0.65 0.33 -0.33
80 AT3G62090 phytochrome interacting factor 3-like 2 PHYTOCHROME-INTERACTING FACTOR 6,
phytochrome interacting factor
3-like 2		 -0.65 0.3 -0.32
81 AT1G02700 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT4G02140.1); Has 49 Blast hits to 49
proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa -
10; Fungi - 6; Plants - 29; Viruses - 0; Other Eukaryotes -
4 (source: NCBI BLink).		 -0.64 0.32 -0.32
82 AT3G48090 alpha/beta-Hydrolases superfamily protein ATEDS1, enhanced disease
susceptibility 1		 0.64 0.31 -0.33
83 AT2G43160 ENTH/VHS family protein 0.64 0.3 -0.33
84 AT4G28520 cruciferin 3 CRUCIFERIN C, cruciferin 3 -0.64 0.33 -0.33
85 AT3G45330 Concanavalin A-like lectin protein kinase family protein 0.64 0.32 -0.34
86 AT1G05530 UDP-glucosyl transferase 75B2 UDP-GLUCOSYL TRANSFERASE 2,
UDP-glucosyl transferase 75B2		 0.64 0.29 -0.33
87 AT4G30140 GDSL-like Lipase/Acylhydrolase superfamily protein CUTICLE DESTRUCTING FACTOR 1 0.64 0.33 -0.32
88 AT1G72190 D-isomer specific 2-hydroxyacid dehydrogenase family
protein		 -0.64 0.31 -0.3
89 AT2G43600 Chitinase family protein 0.63 0.33 -0.3
90 AT2G39890 proline transporter 1 PROLINE TRANSPORTER 1, proline
transporter 1		 0.63 0.29 -0.31
91 AT2G11140 transposable element gene 0.63 0.31 -0.3
92 AT3G48190 ataxia-telangiectasia mutated ARABIDOPSIS THALIANA
ATAXIA-TELANGIECTASIA MUTATED,
ataxia-telangiectasia mutated, pcd
in male gametogenesis 1		 -0.63 0.32 -0.31
93 AT3G21090 ABC-2 type transporter family protein ATP-binding cassette G15 -0.63 0.32 -0.31
94 AT1G29240 Protein of unknown function (DUF688) -0.63 0.31 -0.31
95 AT5G54140 IAA-leucine-resistant (ILR1)-like 3 IAA-leucine-resistant (ILR1)-like
3		 0.63 0.31 -0.32
96 AT4G00750 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.63 0.33 -0.33
97 AT5G40960 Protein of unknown function (DUF 3339) -0.63 0.31 -0.32
98 AT1G71070 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 0.62 0.32 -0.33
99 AT2G36490 demeter-like 1 demeter-like 1, REPRESSOR OF
SILENCING1		 -0.62 0.32 -0.31
100 AT5G48500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G10930.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.62 0.33 -0.29
101 AT5G45240 Disease resistance protein (TIR-NBS-LRR class) 0.62 0.34 -0.32
102 AT5G66110 Heavy metal transport/detoxification superfamily protein heavy metal associated
isoprenylated plant protein 27		 -0.62 0.31 -0.27
103 AT5G13710 sterol methyltransferase 1 CEPHALOPOD, sterol
methyltransferase 1		 0.61 0.29 -0.33
104 AT3G24070 Zinc knuckle (CCHC-type) family protein -0.61 0.33 -0.31
105 AT5G20680 TRICHOME BIREFRINGENCE-LIKE 16 TRICHOME BIREFRINGENCE-LIKE 16 0.61 0.3 -0.31
106 AT2G02800 protein kinase 2B protein kinase 2B, kinase 2 0.61 0.32 -0.34
107 AT1G73970 unknown protein; Has 34 Blast hits to 33 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.61 0.33 -0.3
108 AT4G37445 BEST Arabidopsis thaliana protein match is: Calcium-binding
EF hand family protein (TAIR:AT1G64850.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.61 0.36 -0.32
109 AT4G19010 AMP-dependent synthetase and ligase family protein 0.61 0.31 -0.29
110 AT1G66140 zinc finger protein 4 zinc finger protein 4 -0.61 0.31 -0.32
111 AT1G65680 expansin B2 expansin B2, ATHEXP BETA 1.4,
expansin B2		 0.61 0.3 -0.32
112 AT5G17060 ADP-ribosylation factor B1B ADP-ribosylation factor B1B,
ADP-ribosylation factor B1B		 0.61 0.32 -0.31
113 AT1G48130 1-cysteine peroxiredoxin 1 1-cysteine peroxiredoxin 1,
1-cysteine peroxiredoxin 1		 -0.6 0.29 -0.33
114 AT3G53040 late embryogenesis abundant protein, putative / LEA
protein, putative		 -0.6 0.32 -0.3
115 AT1G09010 glycoside hydrolase family 2 protein -0.6 0.3 -0.32
116 AT2G38530 lipid transfer protein 2 cell growth defect factor-3, LP2,
lipid transfer protein 2		 -0.59 0.34 -0.29
117 AT1G68490 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G13390.2); Has 125 Blast
hits to 125 proteins in 18 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.36 -0.32
118 AT4G17080 Histone H3 K4-specific methyltransferase SET7/9 family
protein		 -0.58 0.34 -0.34
119 AT1G54740 Protein of unknown function (DUF3049) -0.58 0.29 -0.33
120 AT1G25410 isopentenyltransferase 6 ARABIDOPSIS THALIANA
ISOPENTENYLTRANSFERASE 6,
isopentenyltransferase 6		 -0.58 0.31 -0.32
121 ATCG00550 photosystem II reaction center protein J photosystem II reaction center
protein J		 -0.58 0.34 -0.32
122 AT5G65550 UDP-Glycosyltransferase superfamily protein -0.58 0.32 -0.31
123 AT1G27461 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.58 0.3 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
124 C0180 MST_2539.9 - - - -0.68 0.43 -0.46
125 C0226 Raffinose pentahydrate D-(+)-Raffinose pentahydrate - galactolipid biosynthesis suppression,
polysaccharide biosynthesis 		0.62 0.3 -0.32