AT4G36710 : Arabidopsis thaliana HAIRY MERISTEM 4
Query Information
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AGICode AT4G36710
Description GRAS family transcription factor
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G36710 GRAS family transcription factor Arabidopsis thaliana HAIRY
MERISTEM 4, HAM4		 1 0.3 -0.34
2 AT5G10510 AINTEGUMENTA-like 6 AINTEGUMENTA-like 6, PLETHORA 3 -0.72 0.28 -0.3
3 AT4G36180 Leucine-rich receptor-like protein kinase family protein -0.72 0.32 -0.32
4 AT4G37650 GRAS family transcription factor SHOOT GRAVITROPISM 7, SHORT ROOT -0.71 0.32 -0.31
5 AT1G50660 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G20350.1); Has 21445 Blast hits to 15134 proteins
in 1325 species: Archae - 461; Bacteria - 2309; Metazoa -
11052; Fungi - 1737; Plants - 1035; Viruses - 42; Other
Eukaryotes - 4809 (source: NCBI BLink).		 -0.71 0.32 -0.29
6 AT5G60210 ROP interactive partner 5 ROP interactive partner 5 -0.68 0.31 -0.33
7 AT2G45830 downstream target of AGL15 2 downstream target of AGL15 2 -0.68 0.3 -0.3
8 AT4G08150 KNOTTED-like from Arabidopsis thaliana BREVIPEDICELLUS, BREVIPEDICELLUS
1, KNOTTED-like from Arabidopsis
thaliana		 -0.67 0.28 -0.33
9 AT3G55920 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 0.67 0.33 -0.3
10 AT3G48410 alpha/beta-Hydrolases superfamily protein -0.67 0.32 -0.3
11 AT4G00200 AT hook motif DNA-binding family protein -0.67 0.31 -0.28
12 AT4G15210 beta-amylase 5 AT-BETA-AMY, ARABIDOPSIS THALIANA
BETA-AMYLASE, beta-amylase 5,
BMY1, REDUCED BETA AMYLASE 1		 0.66 0.31 -0.33
13 AT5G54510 Auxin-responsive GH3 family protein DWARF IN LIGHT 1, GH3.6 -0.66 0.31 -0.3
14 AT1G75520 SHI-related sequence 5 SHI-related sequence 5 -0.66 0.3 -0.33
15 AT1G34110 Leucine-rich receptor-like protein kinase family protein -0.65 0.3 -0.3
16 AT1G19850 Transcriptional factor B3 family protein / auxin-responsive
factor AUX/IAA-related		 AUXIN RESPONSE FACTOR 5,
indole-3-acetic acid inducible 24,
MONOPTEROS		 -0.65 0.31 -0.33
17 AT4G34970 actin depolymerizing factor 9 actin depolymerizing factor 9 -0.65 0.31 -0.31
18 AT2G42430 lateral organ boundaries-domain 16 ASYMMETRIC LEAVES2-LIKE 18,
lateral organ boundaries-domain 16		 -0.65 0.29 -0.31
19 AT1G56020 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G12970.1); Has 3011 Blast hits
to 958 proteins in 192 species: Archae - 0; Bacteria - 193;
Metazoa - 479; Fungi - 286; Plants - 158; Viruses - 8;
Other Eukaryotes - 1887 (source: NCBI BLink).		 -0.64 0.34 -0.31
20 AT5G60800 Heavy metal transport/detoxification superfamily protein 0.64 0.31 -0.3
21 AT3G03090 vacuolar glucose transporter 1 vacuolar glucose transporter 1,
vacuolar glucose transporter 1		 0.64 0.31 -0.34
22 AT2G39370 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G37380.1); Has 184 Blast hits
to 178 proteins in 53 species: Archae - 0; Bacteria - 58;
Metazoa - 9; Fungi - 0; Plants - 103; Viruses - 0; Other
Eukaryotes - 14 (source: NCBI BLink).		 MEMBRANE-ASSOCIATED KINASE
REGULATOR 4		 -0.64 0.31 -0.34
23 AT4G27260 Auxin-responsive GH3 family protein GH3.5, WES1 -0.64 0.33 -0.32
24 AT2G33310 auxin-induced protein 13 auxin-induced protein 13 -0.63 0.3 -0.3
25 AT2G38370 Plant protein of unknown function (DUF827) -0.63 0.32 -0.34
26 AT3G24660 transmembrane kinase-like 1 transmembrane kinase-like 1 -0.63 0.3 -0.34
27 AT4G14965 membrane-associated progesterone binding protein 4 membrane-associated progesterone
binding protein 4,
membrane-associated progesterone
binding protein 4		 0.63 0.31 -0.3
28 AT5G61520 Major facilitator superfamily protein 0.63 0.31 -0.33
29 AT2G23680 Cold acclimation protein WCOR413 family 0.62 0.32 -0.29
30 AT1G78100 F-box family protein auxin up-regulated f-box protein 1 -0.62 0.31 -0.33
31 AT3G15240 Serine/threonine-protein kinase WNK (With No
Lysine)-related		 -0.62 0.33 -0.29
32 AT2G47260 WRKY DNA-binding protein 23 WRKY DNA-BINDING PROTEIN 23, WRKY
DNA-binding protein 23		 -0.62 0.31 -0.29
33 AT5G43690 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.62 0.32 -0.31
34 AT1G04710 peroxisomal 3-ketoacyl-CoA thiolase 4 3-KETO-ACYL-COA THIOLASE 1,
peroxisomal 3-ketoacyl-CoA
thiolase 4		 0.62 0.32 -0.33
35 AT5G01870 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.61 0.31 -0.32
36 AT4G36260 Lateral root primordium (LRP) protein-related SHI RELATED SEQUENCE 2, STYLISH 2 -0.61 0.32 -0.34
37 AT3G17160 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 54259
Blast hits to 25265 proteins in 1209 species: Archae - 350;
Bacteria - 10795; Metazoa - 16137; Fungi - 8620; Plants -
3305; Viruses - 957; Other Eukaryotes - 14095 (source: NCBI
BLink).		 -0.61 0.33 -0.31
38 AT2G19580 tetraspanin2 tetraspanin2 -0.6 0.32 -0.31
39 AT4G17350 Plant protein of unknown function (DUF828) with plant
pleckstrin homology-like region		 -0.6 0.34 -0.3
40 AT3G24450 Heavy metal transport/detoxification superfamily protein -0.6 0.3 -0.31
41 AT3G62100 indole-3-acetic acid inducible 30 indole-3-acetic acid inducible 30 -0.6 0.32 -0.29
42 AT1G73590 Auxin efflux carrier family protein ARABIDOPSIS THALIANA PIN-FORMED 1,
PIN-FORMED 1		 -0.6 0.34 -0.29
43 AT3G14560 unknown protein; Has 6 Blast hits to 6 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.6 0.31 -0.32
44 AT5G48650 Nuclear transport factor 2 (NTF2) family protein with RNA
binding (RRM-RBD-RNP motifs) domain		 -0.6 0.33 -0.3
45 AT2G23030 SNF1-related protein kinase 2.9 SUCROSE NONFERMENTING 1-RELATED
PROTEIN KINASE 2-9, SNF1-related
protein kinase 2.9		 -0.6 0.32 -0.33
46 AT3G08570 Phototropic-responsive NPH3 family protein -0.6 0.31 -0.32
47 AT1G22990 Heavy metal transport/detoxification superfamily protein heavy metal associated
isoprenylated plant protein 22		 -0.59 0.31 -0.32
48 AT5G42630 Homeodomain-like superfamily protein ABERRANT TESTA SHAPE, KANADI 4 -0.59 0.32 -0.34
49 AT5G51590 AT hook motif DNA-binding family protein -0.59 0.3 -0.31
50 AT5G13910 Integrase-type DNA-binding superfamily protein LEAFY PETIOLE -0.59 0.32 -0.34
51 AT5G10100 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 trehalose-6-phosphate phosphatase
I		 -0.59 0.34 -0.31
52 AT5G50790 Nodulin MtN3 family protein AtSWEET10, SWEET10 0.59 0.31 -0.31
53 AT5G18560 Integrase-type DNA-binding superfamily protein PUCHI -0.59 0.34 -0.3
54 AT2G28790 Pathogenesis-related thaumatin superfamily protein -0.58 0.29 -0.33
55 AT5G23430 Transducin/WD40 repeat-like superfamily protein -0.58 0.32 -0.3
56 AT5G61570 Protein kinase superfamily protein 0.58 0.32 -0.3
57 AT1G79580 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 Arabidopsis NAC domain containing
protein 33, SOMBRERO		 -0.58 0.3 -0.31
58 AT1G15940 Tudor/PWWP/MBT superfamily protein -0.58 0.3 -0.32
59 AT1G09280 CONTAINS InterPro DOMAIN/s: Rhodanese-like
(InterPro:IPR001763), Serine hydrolase
(InterPro:IPR005645); BEST Arabidopsis thaliana protein
match is: Rhodanese/Cell cycle control phosphatase
superfamily protein (TAIR:AT2G40760.1); Has 5925 Blast hits
to 5912 proteins in 1592 species: Archae - 0; Bacteria -
2946; Metazoa - 156; Fungi - 408; Plants - 229; Viruses -
0; Other Eukaryotes - 2186 (source: NCBI BLink).		 -0.58 0.33 -0.34
60 AT4G32910 CONTAINS InterPro DOMAIN/s: Nuclear pore complex protein,
Nucleoporin Nup85-like (InterPro:IPR011502); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.58 0.31 -0.31
61 AT3G30350 Encodes a root meristem growth factor (RGF). Belongs to a
family of functionally redundant homologous peptides that
are secreted, tyrosine-sulfated, and expressed mainly in
the stem cell area and the innermost layer of central
columella cells. RGFs are required for maintenance of the
root stem cell niche and transit amplifying cell
proliferation. Members of this family include: At5g60810
(RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350
(RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240
(RGF7), At2g03830 (RGF8) and At5g64770 (RGF9).		 root meristem growth factor 4 -0.58 0.32 -0.33
62 AT4G39190 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G21560.1); Has 5536 Blast hits
to 3562 proteins in 401 species: Archae - 12; Bacteria -
497; Metazoa - 1363; Fungi - 374; Plants - 149; Viruses -
22; Other Eukaryotes - 3119 (source: NCBI BLink).		 0.58 0.31 -0.32
63 AT4G00820 IQ-domain 17 IQ-domain 17 -0.58 0.33 -0.32
64 AT5G67350 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.58 0.33 -0.31
65 AT4G12910 serine carboxypeptidase-like 20 serine carboxypeptidase-like 20 -0.58 0.32 -0.32
66 AT4G22753 sterol 4-alpha methyl oxidase 1-3 ATSMO1-3, sterol 4-alpha methyl
oxidase 1-3		 0.57 0.31 -0.33
67 AT5G26720 unknown protein; Has 15 Blast hits to 15 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.57 0.34 -0.31
68 AT1G56210 Heavy metal transport/detoxification superfamily protein -0.57 0.33 -0.31
69 AT4G13195 CLAVATA3/ESR-RELATED 44 CLAVATA3/ESR-RELATED 44 -0.57 0.32 -0.32
70 AT5G50260 Cysteine proteinases superfamily protein cysteine endopeptidase 1 -0.57 0.32 -0.32
71 AT2G22420 Peroxidase superfamily protein -0.56 0.33 -0.31
72 AT2G46050 Pentatricopeptide repeat (PPR-like) superfamily protein 0.56 0.3 -0.32
73 AT2G33480 NAC domain containing protein 41 NAC domain containing protein 41,
NAC domain containing protein 41		 0.56 0.32 -0.33
74 AT3G51410 Arabidopsis protein of unknown function (DUF241) -0.56 0.32 -0.31
75 AT2G42440 Lateral organ boundaries (LOB) domain family protein -0.56 0.33 -0.31
76 AT5G60200 TARGET OF MONOPTEROS 6 TARGET OF MONOPTEROS 6 -0.56 0.32 -0.31
77 AT2G46990 indole-3-acetic acid inducible 20 indole-3-acetic acid inducible 20 -0.56 0.33 -0.29
78 AT5G28640 SSXT family protein ANGUSTIFOLIA 3, ARABIDOPSIS
GRF1-INTERACTING FACTOR 1,
GRF1-INTERACTING FACTOR,
GRF1-INTERACTING FACTOR 1		 -0.56 0.29 -0.32
79 AT4G14560 indole-3-acetic acid inducible AUXIN RESISTANT 5, indole-3-acetic
acid inducible		 -0.55 0.31 -0.3
80 AT1G77180 chromatin protein family SKIP -0.55 0.3 -0.33
81 AT1G23380 KNOTTED1-like homeobox gene 6 KNOTTED1-like homeobox gene 6,
KNAT6L, KNAT6S		 -0.55 0.32 -0.31
82 AT1G51190 Integrase-type DNA-binding superfamily protein PLETHORA 2 -0.55 0.29 -0.31
83 AT5G23530 carboxyesterase 18 carboxyesterase 18,
carboxyesterase 18		 -0.55 0.31 -0.32
84 AT1G10180 BEST Arabidopsis thaliana protein match is: exocyst complex
component 84B (TAIR:AT5G49830.1); Has 132 Blast hits to 132
proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa -
7; Fungi - 0; Plants - 117; Viruses - 0; Other Eukaryotes -
8 (source: NCBI BLink).		 -0.55 0.31 -0.31
85 AT1G47990 gibberellin 2-oxidase 4 Arabidopsis thaliana gibberellin
2-oxidase 4, gibberellin 2-oxidase
4		 -0.55 0.33 -0.31
86 AT3G26760 NAD(P)-binding Rossmann-fold superfamily protein -0.54 0.31 -0.32
87 AT4G33640 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.54 0.34 -0.32
88 AT4G26950 Protein of unknown function, DUF584 0.54 0.29 -0.31
89 AT5G10850 transposable element gene -0.54 0.32 -0.33
90 AT5G25475 AP2/B3-like transcriptional factor family protein -0.54 0.32 -0.31
91 AT5G66300 NAC domain containing protein 105 Arabidopsis NAC domain containing
protein 105, NAC domain containing
protein 105, VASCULAR-RELATED
NAC-DOMAIN 3		 -0.54 0.3 -0.32
92 AT2G45680 TCP family transcription factor 0.53 0.29 -0.32
93 AT3G62380 CONTAINS InterPro DOMAIN/s: F-box associated interaction
domain (InterPro:IPR017451); BEST Arabidopsis thaliana
protein match is: F-box family protein (TAIR:AT1G71320.1);
Has 422 Blast hits to 419 proteins in 26 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 420;
Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).		 0.53 0.33 -0.32
94 AT1G19380 Protein of unknown function (DUF1195) 0.53 0.33 -0.32
95 AT3G23410 fatty alcohol oxidase 3 ARABIDOPSIS FATTY ALCOHOL OXIDASE
3, fatty alcohol oxidase 3		 0.52 0.31 -0.33
96 AT2G34490 cytochrome P450, family 710, subfamily A, polypeptide 2 cytochrome P450, family 710,
subfamily A, polypeptide 2		 0.52 0.33 -0.31
97 AT5G36160 Tyrosine transaminase family protein 0.52 0.31 -0.31
98 AT5G57730 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.51 0.33 -0.33
99 AT3G16680 DNA binding;DNA-directed RNA polymerases 0.51 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
100 C0133 Kaempferol-3,7-O-α-dirhamnopyranoside Kaempferol-3,7-O-α-L-dirhamnopyranoside Kaempferol-3-rhamnoside-7-rhamnoside kaempferol glucoside biosynthesis (Arabidopsis) 0.87 0.5 -0.44 C0133
101 C0248 Sulfoquinovosyldiacylglycerol-36:3 - Sulfoquinovosyldiacylglycerol sulfolipid biosynthesis -0.85 0.52 -0.53 C0248
102 C0251 Sulfoquinovosyldiacylglycerol-36:6 - Sulfoquinovosyldiacylglycerol sulfolipid biosynthesis -0.67 0.51 -0.51 C0251
103 C0089 Fortunellin - - - -0.65 0.43 -0.46
104 C0019 1-O-β-Glucopyranosylsinapic acid 1-O-β-D-Glucopyranosylsinapic acid - phenylpropanoid pathwayl,
lignin biosynthesis 		-0.65 0.43 -0.44
105 C0024 2-(Anilinomethyl)pyrrolidine (S)-(+)-2-(anilinomethyl)pyrrolidine - - -0.62 0.44 -0.44
106 C0229 Robinin - - flavone biosynthesis -0.61 0.41 -0.44