AT5G17490 : AtRGL3
Query Information
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AGICode AT5G17490
Description RGA-like protein 3
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G17490 RGA-like protein 3 AtRGL3, RGA-like protein 3 1 0.32 -0.32
2 AT3G01400 ARM repeat superfamily protein 0.84 0.3 -0.34
3 AT3G17860 jasmonate-zim-domain protein 3 JASMONATE-INSENSITIVE 3,
jasmonate-zim-domain protein 3,
TIFY6B		 0.78 0.3 -0.33
4 AT2G17570 Undecaprenyl pyrophosphate synthetase family protein 0.78 0.31 -0.3
5 AT4G34830 Pentatricopeptide repeat (PPR) superfamily protein MATURATION OF RBCL 1, PIGMENT
DEFECTIVE 346		 -0.77 0.32 -0.31
6 AT1G53840 pectin methylesterase 1 pectin methylesterase 1, pectin
methylesterase 1		 0.77 0.3 -0.3
7 AT4G00370 Major facilitator superfamily protein ANTR2, anion transporter 2 -0.77 0.32 -0.31
8 AT2G41940 zinc finger protein 8 zinc finger protein 8 -0.77 0.34 -0.31
9 AT2G23970 Class I glutamine amidotransferase-like superfamily protein 0.77 0.32 -0.32
10 AT1G17220 Translation initiation factor 2, small GTP-binding protein fu-gaeri1 -0.76 0.31 -0.32
11 AT2G35155 Trypsin family protein -0.76 0.31 -0.32
12 AT1G49010 Duplicated homeodomain-like superfamily protein -0.75 0.33 -0.31
13 AT4G29750 CRS1 / YhbY (CRM) domain-containing protein -0.75 0.32 -0.32
14 AT1G29330 ER lumen protein retaining receptor family protein ARABIDOPSIS ENDOPLASMIC RETICULUM
RETENTION DEFECTIVE 2, ARABIDOPSIS
THALIANA ENDOPLASMIC RETICULUM
RETENTION DEFECTIVE 2, ENDOPLASMIC
RETICULUM RETENTION DEFECTIVE 2		 0.75 0.29 -0.3
15 AT2G23390 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF482 (InterPro:IPR007434), Acyl-CoA N-acyltransferase
(InterPro:IPR016181); Has 2165 Blast hits to 2163 proteins
in 543 species: Archae - 0; Bacteria - 1044; Metazoa - 0;
Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes -
1088 (source: NCBI BLink).		 -0.74 0.31 -0.31
16 AT4G18375 RNA-binding KH domain-containing protein -0.74 0.32 -0.33
17 AT3G52820 purple acid phosphatase 22 PURPLE ACID PHOSPHATASE 22, purple
acid phosphatase 22		 0.74 0.31 -0.33
18 AT4G24810 Protein kinase superfamily protein -0.73 0.33 -0.32
19 AT3G10160 DHFS-FPGS homolog C A. THALIANA DHFS-FPGS HOMOLOG C,
DHFS-FPGS homolog C,
folylpolyglutamate synthetase 2		 -0.73 0.3 -0.33
20 AT1G17744 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: stem; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.73 0.32 -0.33
21 AT3G46130 myb domain protein 48 myb domain protein 48, ATMYB48-1,
ATMYB48-2, ATMYB48-3, myb domain
protein 48		 -0.73 0.29 -0.33
22 AT4G31560 high chlorophyll fluorescence 153 high chlorophyll fluorescence 153 -0.73 0.32 -0.32
23 AT3G10800 Basic-leucine zipper (bZIP) transcription factor family
protein		 BZIP28 0.73 0.31 -0.33
24 AT3G14070 cation exchanger 9 CATION CALCIUM EXCHANGER 3, cation
exchanger 9, CATION CALCIUM
EXCHANGER 3		 0.73 0.33 -0.33
25 AT3G53170 Tetratricopeptide repeat (TPR)-like superfamily protein -0.73 0.31 -0.29
26 AT1G10522 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 24 Blast hits to 24 proteins
in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.72 0.32 -0.31
27 AT5G04620 biotin F biotin F, biotin 4, biotin F -0.72 0.32 -0.33
28 AT3G25690 Hydroxyproline-rich glycoprotein family protein Arabidopsis thaliana CHLOROPLAST
UNUSUAL POSITIONING 1, CHLOROPLAST
UNUSUAL POSITIONING 1		 -0.72 0.32 -0.3
29 AT4G00850 GRF1-interacting factor 3 GRF1-interacting factor 3 -0.72 0.3 -0.31
30 AT4G32450 Pentatricopeptide repeat (PPR) superfamily protein -0.72 0.33 -0.31
31 AT3G63220 Galactose oxidase/kelch repeat superfamily protein 0.72 0.31 -0.3
32 AT3G52780 Purple acid phosphatases superfamily protein ATPAP20, PAP20 0.71 0.31 -0.31
33 AT2G24120 DNA/RNA polymerases superfamily protein PIGMENT DEFECTIVE 319, SCABRA 3 -0.71 0.31 -0.31
34 AT1G52140 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G16330.1); Has 114 Blast hits
to 114 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.71 0.32 -0.32
35 AT3G19910 RING/U-box superfamily protein 0.71 0.31 -0.32
36 AT2G29960 cyclophilin 5 ARABIDOPSIS THALIANA CYCLOPHILIN
5, CYCLOPHILIN 19-4, cyclophilin 5		 0.71 0.31 -0.34
37 AT5G58310 methyl esterase 18 ARABIDOPSIS THALIANA METHYL
ESTERASE 18, methyl esterase 18		 -0.71 0.31 -0.3
38 AT2G18750 Calmodulin-binding protein 0.71 0.32 -0.29
39 AT1G77120 alcohol dehydrogenase 1 ALCOHOL DEHYDROGENASE, alcohol
dehydrogenase 1, ARABIDOPSIS
THALIANA ALCOHOL DEHYDROGENASE,
ATADH1		 0.71 0.32 -0.32
40 AT5G48730 Pentatricopeptide repeat (PPR) superfamily protein -0.71 0.32 -0.31
41 AT5G65450 ubiquitin-specific protease 17 ubiquitin-specific protease 17 -0.7 0.32 -0.31
42 AT1G35750 pumilio 10 pumilio 10, pumilio 10 -0.7 0.32 -0.32
43 AT4G19985 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.7 0.31 -0.32
44 AT5G10470 kinesin like protein for actin based chloroplast movement 1 kinesin like protein for actin
based chloroplast movement 1,
KINESIN CDKA;1 ASSOCIATED 1		 -0.7 0.33 -0.31
45 AT2G42920 Pentatricopeptide repeat (PPR-like) superfamily protein -0.7 0.3 -0.32
46 AT5G56850 unknown protein; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to
34131 proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses -
0; Other Eukaryotes - 9610 (source: NCBI BLink).		 -0.7 0.33 -0.33
47 AT5G53170 FTSH protease 11 FTSH protease 11 -0.7 0.31 -0.34
48 AT5G06710 homeobox from Arabidopsis thaliana homeobox from Arabidopsis thaliana -0.7 0.33 -0.32
49 AT3G20340 Expression of the gene is downregulated in the presence of
paraquat, an inducer of photoxidative stress.		 0.69 0.31 -0.31
50 AT1G23180 ARM repeat superfamily protein -0.69 0.32 -0.3
51 AT2G45800 GATA type zinc finger transcription factor family protein PLIM2a -0.69 0.31 -0.32
52 AT3G23070 CRM family member 3A ATCFM3A, CRM family member 3A -0.69 0.33 -0.32
53 AT1G15230 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; Has 26
Blast hits to 26 proteins in 12 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.69 0.31 -0.32
54 AT3G56490 HIS triad family protein 3 HISTIDINE TRIAD NUCLEOTIDE-BINDING
1, HIS triad family protein 3		 0.68 0.31 -0.33
55 AT4G32980 homeobox gene 1 homeobox gene 1 -0.68 0.34 -0.31
56 AT2G33820 Mitochondrial substrate carrier family protein ATMBAC1, MBAC1 -0.68 0.31 -0.34
57 AT2G41720 Tetratricopeptide repeat (TPR)-like superfamily protein EMBRYO DEFECTIVE 2654 -0.68 0.29 -0.32
58 AT4G24090 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 144 Blast hits to 142
proteins in 73 species: Archae - 3; Bacteria - 62; Metazoa
- 7; Fungi - 13; Plants - 44; Viruses - 0; Other Eukaryotes
- 15 (source: NCBI BLink).		 -0.68 0.32 -0.31
59 AT2G06230 transposable element gene -0.68 0.31 -0.32
60 AT5G17510 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G03460.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.68 0.31 -0.31
61 AT2G13440 glucose-inhibited division family A protein -0.68 0.31 -0.31
62 AT2G40100 light harvesting complex photosystem II light harvesting complex
photosystem II		 -0.68 0.33 -0.32
63 AT1G50450 Saccharopine dehydrogenase -0.68 0.3 -0.32
64 AT2G48120 pale cress protein (PAC) PALE CRESS -0.68 0.3 -0.31
65 AT2G38330 MATE efflux family protein -0.67 0.31 -0.31
66 AT2G38920 SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc
finger (C3HC4-type RING finger) protein-related		 0.67 0.32 -0.33
67 AT5G06300 Putative lysine decarboxylase family protein LONELY GUY 7 0.67 0.33 -0.31
68 AT5G15570 Bromodomain transcription factor -0.67 0.31 -0.32
69 AT5G02830 Tetratricopeptide repeat (TPR)-like superfamily protein -0.67 0.31 -0.3
70 AT3G13620 Amino acid permease family protein 0.67 0.31 -0.31
71 AT3G02140 AFP2 (ABI five-binding protein 2) family protein ABI FIVE BINDING PROTEIN 4, TWO OR
MORE ABRES-CONTAINING GENE 2		 0.67 0.33 -0.33
72 AT4G37870 phosphoenolpyruvate carboxykinase 1 phosphoenolpyruvate carboxykinase
1, PHOSPHOENOLPYRUVATE
CARBOXYKINASE		 0.67 0.33 -0.31
73 AT3G59840 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 72
Blast hits to 72 proteins in 12 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.67 0.32 -0.33
74 AT4G22780 ACT domain repeat 7 ACT domain repeat 7 0.67 0.32 -0.32
75 AT2G33610 switch subunit 3 switch subunit 3, CHROMATIN
REMODELING COMPLEX SUBUNIT B,
switch subunit 3		 0.66 0.34 -0.3
76 AT1G13280 allene oxide cyclase 4 allene oxide cyclase 4 0.66 0.31 -0.34
77 AT1G76410 RING/U-box superfamily protein ATL8 0.66 0.32 -0.32
78 AT3G51760 Protein of unknown function (DUF688) 0.66 0.3 -0.32
79 AT2G22960 alpha/beta-Hydrolases superfamily protein 0.66 0.32 -0.34
80 AT1G62990 KNOTTED-like homeobox of Arabidopsis thaliana 7 IXR11, KNOTTED-like homeobox of
Arabidopsis thaliana 7		 0.65 0.29 -0.3
81 AT3G53600 C2H2-type zinc finger family protein 0.65 0.3 -0.32
82 AT5G07010 sulfotransferase 2A ARABIDOPSIS THALIANA
SULFOTRANSFERASE 2A,
sulfotransferase 2A		 0.65 0.31 -0.31
83 AT2G30400 ovate family protein 2 ARABIDOPSIS THALIANA OVATE FAMILY
PROTEIN 2, ovate family protein 2		 0.65 0.29 -0.31
84 AT5G50230 Transducin/WD40 repeat-like superfamily protein 0.65 0.32 -0.32
85 AT2G18210 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G36500.1); Has 50 Blast hits
to 50 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.65 0.3 -0.33
86 AT4G33070 Thiamine pyrophosphate dependent pyruvate decarboxylase
family protein		 0.64 0.31 -0.33
87 AT5G66700 homeobox 53 ARABIDOPSIS THALIANA HOMEOBOX 53,
HOMEOBOX-8, homeobox 53		 0.64 0.3 -0.3
88 AT3G30380 alpha/beta-Hydrolases superfamily protein 0.64 0.3 -0.34
89 AT5G54800 glucose 6-phosphate/phosphate translocator 1 ARABIDOPSIS GLUCOSE
6-PHOSPHATE/PHOSPHATE TRANSLOCATOR
1, glucose 6-phosphate/phosphate
translocator 1		 0.64 0.32 -0.3
90 AT2G43060 ILI1 binding bHLH 1 ILI1 binding bHLH 1 0.64 0.31 -0.33
91 AT2G30130 Lateral organ boundaries (LOB) domain family protein ASL5, LBD12, PEACOCK 1 0.64 0.31 -0.31
92 AT5G66930 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1649 (InterPro:IPR012445); Has 236
Blast hits to 236 proteins in 105 species: Archae - 0;
Bacteria - 0; Metazoa - 93; Fungi - 70; Plants - 56;
Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).		 0.64 0.32 -0.31
93 AT1G73150 global transcription factor group E3 global transcription factor group
E3		 0.64 0.33 -0.31
94 AT1G64930 cytochrome P450, family 87, subfamily A, polypeptide 7 cytochrome P450, family 87,
subfamily A, polypeptide 7		 0.64 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
95 C0241 Stigmasterol 3-O-β-D-glucoside - Stigmasterol 3-O-β-D-glucoside - 0.76 0.5 -0.53 C0241
96 C0192 Oxalic acid - Oxalate ascorbate degradation -0.72 0.45 -0.45 C0192
97 C0119 Indole-3-ylmethyl-glucosinolate - indol-3-ylmethyl glucosinolate indole glucosinolate breakdown (active in intact plant cell),
indole glucosinolate breakdown (insect chewing induced),
glucosinolate biosynthesis from tryptophan 		0.7 0.45 -0.44 C0119
98 C0025 2-Hydroxy-3-butenylglucosinolate (R),(S)-2-Hydroxy-3-butenylglucosinolate 2-hydroxy-3-butenylglucosinolate glucosinolate biosynthesis from dihomomethionine 0.67 0.45 -0.47 C0025