AT5G63420 : embryo defective 2746
Query Information
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AGICode AT5G63420
Description RNA-metabolising metallo-beta-lactamase family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G63420 RNA-metabolising metallo-beta-lactamase family protein embryo defective 2746 1 0.3 -0.32
2 AT5G63420 RNA-metabolising metallo-beta-lactamase family protein embryo defective 2746 0.92 0.3 -0.33
3 AT2G04270 RNAse E/G-like RNAse E/G-like 0.91 0.33 -0.32
4 AT4G17740 Peptidase S41 family protein 0.9 0.29 -0.31
5 AT1G71720 Nucleic acid-binding proteins superfamily PIGMENT DEFECTIVE 338 0.9 0.32 -0.31
6 AT4G29060 elongation factor Ts family protein embryo defective 2726 0.89 0.32 -0.31
7 AT5G42480 Chaperone DnaJ-domain superfamily protein ACCUMULATION AND REPLICATION OF
CHLOROPLASTS 6		 0.89 0.29 -0.32
8 AT3G18110 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 1270 0.89 0.31 -0.3
9 AT5G49030 tRNA synthetase class I (I, L, M and V) family protein ovule abortion 2 0.89 0.3 -0.32
10 AT3G03710 polyribonucleotide nucleotidyltransferase, putative PIGMENT DEFECTIVE 326,
POLYNUCLEOTIDE PHOSPHORYLASE,
resistant to inhibition with FSM
10		 0.88 0.32 -0.31
11 AT4G26370 antitermination NusB domain-containing protein 0.88 0.29 -0.3
12 AT4G30720 FAD/NAD(P)-binding oxidoreductase family protein PIGMENT DEFECTIVE 327 0.88 0.3 -0.31
13 AT3G48110 glycine-tRNA ligases EDD, EMBRYO-DEFECTIVE-DEVELOPMENT
1		 0.88 0.32 -0.31
14 AT3G57180 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 BRASSINAZOLE(BRZ) INSENSITIVE PALE
GREEN 2		 0.87 0.31 -0.29
15 AT3G59040 Tetratricopeptide repeat (TPR)-like superfamily protein 0.87 0.32 -0.3
16 AT5G64580 AAA-type ATPase family protein EMBRYO DEFECTIVE 3144 0.87 0.32 -0.32
17 AT5G22640 MORN (Membrane Occupation and Recognition Nexus)
repeat-containing protein		 embryo defective 1211 0.87 0.34 -0.3
18 AT4G31850 proton gradient regulation 3 proton gradient regulation 3 0.87 0.3 -0.32
19 AT3G04260 plastid transcriptionally active 3 PIGMENT DEFECTIVE 324, plastid
transcriptionally active 3		 0.87 0.31 -0.3
20 AT1G62750 Translation elongation factor EFG/EF2 protein SNOWY COTYLEDON 1, ATSCO1/CPEF-G,
SNOWY COTYLEDON 1		 0.86 0.34 -0.31
21 AT2G36990 RNApolymerase sigma-subunit F SIGMA FACTOR 6, SIGMA FACTOR 6,
RNApolymerase sigma-subunit F,
SOLDAT8		 0.86 0.33 -0.32
22 AT1G09900 Pentatricopeptide repeat (PPR-like) superfamily protein 0.86 0.3 -0.33
23 AT1G12800 Nucleic acid-binding, OB-fold-like protein 0.86 0.31 -0.31
24 AT2G34640 plastid transcriptionally active 12 HEMERA, plastid transcriptionally
active 12		 0.85 0.3 -0.31
25 AT5G63050 embryo defective 2759 embryo defective 2759 0.85 0.3 -0.3
26 AT2G13440 glucose-inhibited division family A protein 0.85 0.31 -0.32
27 AT2G14880 SWIB/MDM2 domain superfamily protein 0.85 0.32 -0.33
28 AT1G10510 RNI-like superfamily protein embryo defective 2004 0.85 0.31 -0.31
29 AT3G06980 DEA(D/H)-box RNA helicase family protein 0.85 0.33 -0.31
30 AT3G04340 FtsH extracellular protease family embryo defective 2458 0.84 0.33 -0.32
31 AT4G39960 Molecular chaperone Hsp40/DnaJ family protein 0.84 0.3 -0.32
32 AT5G10470 kinesin like protein for actin based chloroplast movement 1 kinesin like protein for actin
based chloroplast movement 1,
KINESIN CDKA;1 ASSOCIATED 1		 0.84 0.32 -0.3
33 AT3G12080 GTP-binding family protein embryo defective 2738 0.84 0.34 -0.3
34 AT1G42550 plastid movement impaired1 PLASTID MOVEMENT IMPAIRED1 0.84 0.33 -0.32
35 AT5G48830 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.84 0.32 -0.3
36 AT3G53460 chloroplast RNA-binding protein 29 chloroplast RNA-binding protein 29 0.84 0.33 -0.31
37 AT1G69200 fructokinase-like 2 fructokinase-like 2 0.84 0.31 -0.32
38 AT1G48460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast envelope; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G63040.1); Has 60 Blast hits to 60 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.84 0.3 -0.3
39 AT5G19210 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.84 0.31 -0.34
40 AT5G08610 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 PIGMENT DEFECTIVE 340 0.83 0.3 -0.31
41 AT5G20130 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.83 0.31 -0.33
42 AT4G18580 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.83 0.29 -0.32
43 AT3G57430 Tetratricopeptide repeat (TPR)-like superfamily protein ORGANELLE TRANSCRIPT PROCESSING 84 0.83 0.33 -0.32
44 AT2G18940 Tetratricopeptide repeat (TPR)-like superfamily protein 0.82 0.32 -0.34
45 AT1G73090 unknown protein; Has 28 Blast hits to 28 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.82 0.33 -0.32
46 AT3G10840 alpha/beta-Hydrolases superfamily protein 0.82 0.29 -0.29
47 AT3G26744 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 A. THALIANA INDUCER OF CBP
EXPRESSION 1, INDUCER OF CBF
EXPRESSION 1, SCREAM		 0.82 0.29 -0.33
48 AT4G02510 translocon at the outer envelope membrane of chloroplasts
159		 ATTOC159, PLASTID PROTEIN IMPORT
2, translocon at the outer
envelope membrane of chloroplasts
159, TRANSLOCON AT THE OUTER
ENVELOPE MEMBRANE OF CHLOROPLASTS
160, TRANSLOCON AT THE OUTER
ENVELOPE MEMBRANE OF CHLOROPLASTS
86		 0.82 0.31 -0.32
49 AT5G18570 GTP1/OBG family protein ATOBGC, OBG-like protein,
chloroplastic SAR1, EMBRYO
DEFECTIVE 269, EMBRYO DEFECTIVE
3138		 0.82 0.31 -0.31
50 AT5G16715 ATP binding;valine-tRNA ligases;aminoacyl-tRNA
ligases;nucleotide binding;ATP binding;aminoacyl-tRNA
ligases		 embryo defective 2247 0.82 0.27 -0.32
51 AT1G50450 Saccharopine dehydrogenase 0.82 0.32 -0.31
52 AT3G46740 translocon at the outer envelope membrane of chloroplasts
75-III		 MODIFIER OF ARG1 1, translocon at
the outer envelope membrane of
chloroplasts 75-III		 0.82 0.32 -0.3
53 AT3G43610 Spc97 / Spc98 family of spindle pole body (SBP) component 0.82 0.32 -0.33
54 AT1G63680 acid-amino acid ligases;ligases;ATP binding;ATP
binding;ligases		 ALBINO OR PALE-GREEN 13, ATMURE,
MURE, PIGMENT DEFECTIVE EMBRYO 316		 0.82 0.3 -0.3
55 AT4G04890 protodermal factor 2 protodermal factor 2 0.81 0.32 -0.32
56 AT4G18750 Pentatricopeptide repeat (PPR) superfamily protein DEFECTIVELY ORGANIZED TRIBUTARIES
4		 0.81 0.33 -0.33
57 AT2G45850 AT hook motif DNA-binding family protein 0.81 0.32 -0.34
58 AT4G00370 Major facilitator superfamily protein ANTR2, anion transporter 2 0.81 0.32 -0.32
59 AT5G49330 myb domain protein 111 ARABIDOPSIS MYB DOMAIN PROTEIN
111, myb domain protein 111,
PRODUCTION OF FLAVONOL GLYCOSIDES
3		 0.81 0.33 -0.32
60 AT2G24120 DNA/RNA polymerases superfamily protein PIGMENT DEFECTIVE 319, SCABRA 3 0.8 0.3 -0.3
61 AT4G26670 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 0.8 0.3 -0.32
62 AT3G02250 O-fucosyltransferase family protein 0.8 0.28 -0.34
63 AT4G18240 starch synthase 4 ARABIDOPSIS THALIANA STARCH
SYNTHASE 4, starch synthase 4,
STARCH SYNTHASE 4		 0.8 0.33 -0.33
64 AT3G25290 Auxin-responsive family protein -0.8 0.33 -0.31
65 AT1G18090 5'-3' exonuclease family protein 0.8 0.31 -0.29
66 AT4G07390 Mannose-P-dolichol utilization defect 1 protein -0.79 0.31 -0.33
67 AT1G77370 Glutaredoxin family protein -0.77 0.34 -0.3
68 AT1G52140 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G16330.1); Has 114 Blast hits
to 114 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.76 0.3 -0.31
69 AT1G72470 exocyst subunit exo70 family protein D1 exocyst subunit exo70 family
protein D1, exocyst subunit exo70
family protein D1		 -0.75 0.3 -0.29
70 AT2G25280 CONTAINS InterPro DOMAIN/s: UPF0103/Mediator of
ErbB2-driven cell motility (Memo), related
(InterPro:IPR002737); Has 1074 Blast hits to 1072 proteins
in 474 species: Archae - 213; Bacteria - 366; Metazoa -
159; Fungi - 135; Plants - 54; Viruses - 0; Other
Eukaryotes - 147 (source: NCBI BLink).		 -0.74 0.32 -0.34
71 AT3G28850 Glutaredoxin family protein -0.74 0.31 -0.34
72 AT4G05590 CONTAINS InterPro DOMAIN/s: Uncharacterised protein family
UPF0041 (InterPro:IPR005336); BEST Arabidopsis thaliana
protein match is: Uncharacterised protein family (UPF0041)
(TAIR:AT4G22310.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.73 0.3 -0.32
73 AT1G55920 serine acetyltransferase 2;1 serine acetyltransferase 2;1,
SERINE ACETYLTRANSFERASE 1, SERINE
ACETYLTRANSFERASE 5, serine
acetyltransferase 2;1		 -0.73 0.31 -0.31
74 AT5G17650 glycine/proline-rich protein -0.73 0.33 -0.31
75 AT5G59140 BTB/POZ domain-containing protein -0.72 0.33 -0.32
76 AT2G47520 Integrase-type DNA-binding superfamily protein Arabidopsis thaliana ethylene
response factor 71, ethylene
response factor 71, HYPOXIA
RESPONSIVE ERF (ETHYLENE RESPONSE
FACTOR) 2		 -0.72 0.3 -0.33
77 AT2G27450 nitrilase-like protein 1 ATNLP1, CPA, nitrilase-like
protein 1		 -0.72 0.31 -0.31
78 AT5G45410 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G25030.2); Has 124 Blast hits
to 124 proteins in 34 species: Archae - 2; Bacteria - 31;
Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.72 0.31 -0.3
79 AT1G13280 allene oxide cyclase 4 allene oxide cyclase 4 -0.72 0.35 -0.33
80 AT5G11970 Protein of unknown function (DUF3511) -0.72 0.31 -0.32
81 AT3G28950 AIG2-like (avirulence induced gene) family protein -0.72 0.31 -0.31
82 AT5G16050 general regulatory factor 5 GF14 UPSILON, general regulatory
factor 5		 -0.71 0.31 -0.31
83 AT3G11100 sequence-specific DNA binding transcription factors -0.71 0.32 -0.32
84 AT2G47130 NAD(P)-binding Rossmann-fold superfamily protein AtSDR3, short-chain
dehydrogenase/reductase 2		 -0.7 0.32 -0.32
85 AT1G09740 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.7 0.33 -0.33
86 AT3G59760 O-acetylserine (thiol) lyase isoform C ARABIDOPSIS THALIANA
CYSTEINSYNTHASE-C, O-acetylserine
(thiol) lyase isoform C		 -0.7 0.31 -0.33
87 AT5G10830 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.7 0.3 -0.32
88 AT1G17080 Ribosomal protein L18ae family -0.7 0.32 -0.33
89 AT1G69510 cAMP-regulated phosphoprotein 19-related protein -0.69 0.33 -0.31
90 AT3G01740 Mitochondrial ribosomal protein L37 -0.69 0.33 -0.33
91 AT1G62660 Glycosyl hydrolases family 32 protein -0.69 0.32 -0.32
92 AT3G50900 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G66490.1); Has 45 Blast hits
to 45 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.68 0.32 -0.3
93 AT4G25900 Galactose mutarotase-like superfamily protein -0.68 0.3 -0.33
94 AT1G70690 Receptor-like protein kinase-related family protein HOPW1-1-INDUCED GENE1,
PLASMODESMATA-LOCATED PROTEIN 5		 -0.68 0.31 -0.31
95 AT2G43060 ILI1 binding bHLH 1 ILI1 binding bHLH 1 -0.68 0.31 -0.31
96 AT2G38700 mevalonate diphosphate decarboxylase 1 ATMVD1, mevalonate diphosphate
decarboxylase 1		 -0.68 0.31 -0.31
97 AT1G26550 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 -0.68 0.32 -0.3
98 AT5G37740 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.68 0.31 -0.31
99 AT2G24200 Cytosol aminopeptidase family protein -0.68 0.31 -0.31