AT5G61000 : ATRPA70D
Query Information
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AGICode AT5G61000
Description Replication factor-A protein 1-related
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G61000 Replication factor-A protein 1-related ATRPA70D, RPA70D 1 0.31 -0.32
2 AT1G02970 WEE1 kinase homolog ATWEE1, WEE1 kinase homolog 0.87 0.33 -0.31
3 AT3G54750 unknown protein; Has 145 Blast hits to 145 proteins in 60
species: Archae - 0; Bacteria - 0; Metazoa - 99; Fungi - 0;
Plants - 40; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 0.87 0.32 -0.31
4 AT1G72610 germin-like protein 1 A. THALIANA GERMIN-LIKE PROTEIN 1,
germin-like protein 1, GERMIN-LIKE
PROTEIN 1		 0.86 0.3 -0.33
5 AT5G56710 Ribosomal protein L31e family protein 0.86 0.32 -0.35
6 AT1G07370 proliferating cellular nuclear antigen 1 PROLIFERATING CELLULAR NUCLEAR
ANTIGEN 1, proliferating cellular
nuclear antigen 1		 0.86 0.3 -0.32
7 AT1G09200 Histone superfamily protein 0.85 0.31 -0.32
8 AT3G60245 Zinc-binding ribosomal protein family protein 0.85 0.31 -0.32
9 AT5G09240 ssDNA-binding transcriptional regulator 0.85 0.35 -0.33
10 AT1G21450 SCARECROW-like 1 SCARECROW-like 1 -0.85 0.32 -0.28
11 AT5G45820 CBL-interacting protein kinase 20 CBL-interacting protein kinase 20,
PROTEIN KINASE 18, SNF1-RELATED
PROTEIN KINASE 3.6		 0.84 0.31 -0.32
12 AT3G55430 O-Glycosyl hydrolases family 17 protein -0.84 0.32 -0.32
13 AT2G32150 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.84 0.3 -0.31
14 AT4G28310 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G52270.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.84 0.28 -0.33
15 AT3G53430 Ribosomal protein L11 family protein 0.84 0.3 -0.3
16 AT2G42890 MEI2-like 2 MEI2-like 2, MEI2-like 2 -0.84 0.32 -0.31
17 AT5G64250 Aldolase-type TIM barrel family protein -0.84 0.31 -0.31
18 AT3G48520 cytochrome P450, family 94, subfamily B, polypeptide 3 cytochrome P450, family 94,
subfamily B, polypeptide 3		 -0.84 0.34 -0.32
19 AT1G52080 actin binding protein family AR791 -0.84 0.32 -0.32
20 AT4G23290 cysteine-rich RLK (RECEPTOR-like protein kinase) 21 cysteine-rich RLK (RECEPTOR-like
protein kinase) 21		 0.84 0.33 -0.32
21 AT3G13470 TCP-1/cpn60 chaperonin family protein chaperonin-60beta2 0.84 0.29 -0.31
22 AT2G27830 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G22758.1); Has 131 Blast hits
to 131 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 131; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.84 0.32 -0.3
23 AT2G22170 Lipase/lipooxygenase, PLAT/LH2 family protein 0.84 0.3 -0.32
24 AT3G42660 transducin family protein / WD-40 repeat family protein 0.83 0.33 -0.3
25 AT5G19750 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 0.83 0.3 -0.3
26 AT2G18480 Major facilitator superfamily protein -0.83 0.3 -0.33
27 AT1G60950 2Fe-2S ferredoxin-like superfamily protein FERREDOXIN 2, FED A 0.83 0.33 -0.31
28 AT2G26300 G protein alpha subunit 1 ARABIDOPSIS THALIANA G PROTEIN
ALPHA SUBUNIT 1, G protein alpha
subunit 1, G PROTEIN ALPHA SUBUNIT
1		 -0.83 0.31 -0.34
29 AT2G23670 homolog of Synechocystis YCF37 homolog of Synechocystis YCF37 0.83 0.33 -0.3
30 AT5G05000 translocon at the outer envelope membrane of chloroplasts
34		 ARABIDOPSIS THALIANA TRANSLOCON AT
THE OUTER ENVELOPE MEMBRANE OF
CHLOROPLASTS 34, OEP34, translocon
at the outer envelope membrane of
chloroplasts 34		 0.83 0.32 -0.29
31 AT1G58030 cationic amino acid transporter 2 cationic amino acid transporter 2 -0.82 0.32 -0.31
32 AT1G70480 Domain of unknown function (DUF220) -0.82 0.32 -0.3
33 AT2G25460 CONTAINS InterPro DOMAIN/s: C2 calcium-dependent membrane
targeting (InterPro:IPR000008); BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT5G04860.1); Has
108 Blast hits to 69 proteins in 11 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 108; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.82 0.3 -0.3
34 AT2G15480 UDP-glucosyl transferase 73B5 UDP-glucosyl transferase 73B5 -0.82 0.31 -0.3
35 AT1G12090 extensin-like protein extensin-like protein 0.82 0.32 -0.32
36 AT4G34740 GLN phosphoribosyl pyrophosphate amidotransferase 2 GLN phosphoribosyl pyrophosphate
amidotransferase 2, GLN
phosphoribosyl pyrophosphate
amidotransferase 2, ATPURF2,
CHLOROPLAST IMPORT APPARATUS 1		 0.82 0.33 -0.31
37 AT4G34950 Major facilitator superfamily protein 0.82 0.32 -0.3
38 AT3G49590 Autophagy-related protein 13 autophagy-related 13 -0.82 0.33 -0.3
39 AT5G11160 adenine phosphoribosyltransferase 5 adenine phosphoribosyltransferase
5		 0.82 0.32 -0.31
40 AT4G22670 HSP70-interacting protein 1 HSP70-interacting protein 1,
HSP70-interacting protein 1,
tetratricopeptide repeat 11		 0.82 0.32 -0.31
41 AT3G58100 plasmodesmata callose-binding protein 5 plasmodesmata callose-binding
protein 5		 0.82 0.32 -0.31
42 AT1G24360 NAD(P)-binding Rossmann-fold superfamily protein 0.81 0.32 -0.3
43 AT5G08020 RPA70-kDa subunit B ARABIDOPSIS THALIANA RPA70-KDA
SUBUNIT B, RPA70-kDa subunit B		 0.81 0.31 -0.32
44 AT3G16180 Major facilitator superfamily protein 0.81 0.32 -0.31
45 AT1G50575 Putative lysine decarboxylase family protein 0.8 0.32 -0.31
46 AT3G07560 peroxin 13 ABERRANT PEROXISOME MORPHOLOGY 2,
peroxin 13		 -0.8 0.31 -0.3
47 AT4G33220 pectin methylesterase 44 A. THALIANA PECTIN METHYLESTERASE
44, pectin methylesterase 44		 0.8 0.32 -0.31
48 AT2G06850 xyloglucan endotransglucosylase/hydrolase 4 endoxyloglucan transferase A1,
ENDOXYLOGLUCAN TRANSFERASE,
xyloglucan
endotransglucosylase/hydrolase 4		 0.8 0.3 -0.28
49 AT2G31260 autophagy 9 (APG9) autophagy 9, ATAPG9 -0.8 0.33 -0.3
50 AT5G10390 Histone superfamily protein 0.8 0.31 -0.33
51 AT5G24800 basic leucine zipper 9 ARABIDOPSIS THALIANA BASIC LEUCINE
ZIPPER 9, basic leucine zipper 9,
BASIC LEUCINE ZIPPER O2 HOMOLOG 2		 -0.8 0.31 -0.3
52 AT5G52650 RNA binding Plectin/S10 domain-containing protein 0.8 0.32 -0.32
53 AT3G20240 Mitochondrial substrate carrier family protein 0.8 0.3 -0.32
54 AT1G19800 trigalactosyldiacylglycerol 1 ATP-binding cassette I14,
trigalactosyldiacylglycerol 1		 0.8 0.31 -0.31
55 AT5G03120 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; Has 14 Blast hits to 14
proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.8 0.32 -0.3
56 AT2G37860 Protein of unknown function (DUF3411) LOWER CELL DENSITY 1 0.79 0.34 -0.32
57 AT5G08415 Radical SAM superfamily protein 0.79 0.33 -0.3
58 AT3G49490 unknown protein; Has 722 Blast hits to 186 proteins in 64
species: Archae - 0; Bacteria - 30; Metazoa - 72; Fungi -
48; Plants - 38; Viruses - 0; Other Eukaryotes - 534
(source: NCBI BLink).		 -0.79 0.34 -0.32
59 AT1G13195 RING/U-box superfamily protein -0.79 0.32 -0.33
60 AT5G66650 Protein of unknown function (DUF607) -0.79 0.32 -0.32
61 AT2G01490 phytanoyl-CoA dioxygenase (PhyH) family protein -0.79 0.33 -0.32
62 AT1G05840 Eukaryotic aspartyl protease family protein -0.79 0.33 -0.36
63 AT1G09830 Glycinamide ribonucleotide (GAR) synthetase 0.79 0.3 -0.3
64 AT2G44310 Calcium-binding EF-hand family protein 0.79 0.32 -0.34
65 AT4G30000 Dihydropterin pyrophosphokinase / Dihydropteroate synthase 0.79 0.32 -0.31
66 AT3G56330 N2,N2-dimethylguanosine tRNA methyltransferase 0.79 0.32 -0.3
67 AT1G16390 organic cation/carnitine transporter 3 organic cation/carnitine
transporter 3, organic
cation/carnitine transporter 3		 0.78 0.33 -0.3
68 AT5G23580 calmodulin-like domain protein kinase 9 ARABIDOPSIS THALIANA
CALMODULIN-LIKE DOMAIN PROTEIN
KINASE 9, ATCPK12, calmodulin-like
domain protein kinase 9,
CALCIUM-DEPENDENT PROTEIN KINASE
12		 -0.78 0.3 -0.34
69 AT5G54080 homogentisate 1,2-dioxygenase homogentisate 1,2-dioxygenase -0.78 0.31 -0.32
70 AT4G02060 Minichromosome maintenance (MCM2/3/5) family protein MCM7, PROLIFERA 0.78 0.32 -0.31
71 AT4G32250 Protein kinase superfamily protein -0.78 0.34 -0.31
72 AT2G31945 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 8 plant structures;
EXPRESSED DURING: 4 anthesis, petal differentiation and
expansion stage; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G05575.1); Has 61 Blast hits
to 61 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.78 0.32 -0.32
73 AT1G61580 R-protein L3 B ARABIDOPSIS RIBOSOMAL PROTEIN 2,
R-protein L3 B		 0.78 0.3 -0.3
74 AT2G37560 origin recognition complex second largest subunit 2 ORIGIN RECOGNITION COMPLEX SECOND
LARGEST SUBUNIT 2, origin
recognition complex second largest
subunit 2		 0.78 0.31 -0.3
75 AT2G38170 cation exchanger 1 ATCAX1, cation exchanger 1, RARE
COLD INDUCIBLE 4		 0.78 0.32 -0.29
76 AT1G65430 IBR domain-containing protein ARIADNE 8, ARABIDOPSIS ARIADNE 8 -0.78 0.31 -0.31
77 AT1G68620 alpha/beta-Hydrolases superfamily protein -0.78 0.3 -0.29
78 AT5G20850 RAS associated with diabetes protein 51 RAS associated with diabetes
protein 51, RAS associated with
diabetes protein 51		 0.78 0.31 -0.32
79 AT4G24520 P450 reductase 1 ARABIDOPSIS CYTOCHROME REDUCTASE,
P450 reductase 1		 -0.78 0.3 -0.31
80 AT2G01180 phosphatidic acid phosphatase 1 ATLPP1, phosphatidic acid
phosphatase 1, LIPID PHOSPHATE
PHOSPHATASE 1, phosphatidic acid
phosphatase 1		 -0.78 0.3 -0.32
81 AT2G23450 Protein kinase superfamily protein -0.77 0.33 -0.31
82 AT1G01720 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 Arabidopsis NAC domain containing
protein 2, ATAF1		 -0.77 0.31 -0.31
83 AT1G68140 Protein of unknown function (DUF1644) -0.77 0.3 -0.33
84 AT1G29760 Putative adipose-regulatory protein (Seipin) -0.77 0.33 -0.32
85 AT1G20880 RNA-binding (RRM/RBD/RNP motifs) family protein -0.77 0.31 -0.31
86 AT2G47950 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: root, flower; EXPRESSED
DURING: petal differentiation and expansion stage; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G62990.1); Has 22 Blast hits to 22 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.77 0.28 -0.3
87 AT1G08920 ERD (early response to dehydration) six-like 1 ERD (early response to
dehydration) six-like 1		 -0.77 0.31 -0.3
88 AT2G03240 EXS (ERD1/XPR1/SYG1) family protein -0.77 0.34 -0.3
89 AT3G25620 ABC-2 type transporter family protein ATP-binding cassette G21 -0.77 0.33 -0.31
90 AT4G16110 response regulator 2 response regulator 2, response
regulator 2		 -0.77 0.32 -0.33
91 AT1G55110 indeterminate(ID)-domain 7 indeterminate(ID)-domain 7,
indeterminate(ID)-domain 7		 -0.76 0.31 -0.31
92 AT1G12360 Sec1/munc18-like (SM) proteins superfamily keule -0.76 0.31 -0.34
93 AT2G22300 signal responsive 1 CALMODULIN-BINDING TRANSCRIPTION
ACTIVATOR 3, signal responsive 1		 -0.76 0.31 -0.32
94 AT1G05560 UDP-glucosyltransferase 75B1 UDP-GLUCOSE TRANSFERASE 1,
UDP-glucosyltransferase 75B1		 -0.76 0.32 -0.29
95 AT3G62770 Transducin/WD40 repeat-like superfamily protein autophagy 18a, autophagy 18a -0.76 0.34 -0.29
96 AT2G02370 SNARE associated Golgi protein family -0.76 0.33 -0.32
97 AT1G19680 RING/U-box superfamily protein -0.76 0.33 -0.31
98 AT4G33940 RING/U-box superfamily protein -0.75 0.32 -0.34
99 AT2G40110 Yippee family putative zinc-binding protein -0.75 0.34 -0.33
100 AT5G04040 Patatin-like phospholipase family protein SUGAR-DEPENDENT1 -0.75 0.31 -0.3
101 AT4G37290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to karrikin; LOCATED IN: endomembrane
system; EXPRESSED IN: cotyledon, hypocotyl, leaf; EXPRESSED
DURING: LP.04 four leaves visible; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G23270.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.75 0.32 -0.3
102 AT2G44130 Galactose oxidase/kelch repeat superfamily protein -0.75 0.32 -0.33
103 AT5G64260 EXORDIUM like 2 EXORDIUM like 2 -0.75 0.3 -0.33
104 AT3G47340 glutamine-dependent asparagine synthase 1 glutamine-dependent asparagine
synthase 1, ARABIDOPSIS THALIANA
GLUTAMINE-DEPENDENT ASPARAGINE
SYNTHASE 1, DARK INDUCIBLE 6		 -0.74 0.31 -0.31
105 AT3G54200 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.74 0.29 -0.3
106 AT5G57550 xyloglucan endotransglucosylase/hydrolase 25 xyloglucan
endotransglucosylase/hydrolase 25,
xyloglucan endotransglycosylase 3		 -0.74 0.31 -0.31
107 AT1G60610 SBP (S-ribonuclease binding protein) family protein -0.74 0.31 -0.31
108 AT2G25490 EIN3-binding F box protein 1 EIN3-binding F box protein 1, FBL6 -0.74 0.3 -0.32
109 AT1G73080 PEP1 receptor 1 PEP1 RECEPTOR 1, PEP1 receptor 1 -0.74 0.33 -0.32
110 AT5G47050 SBP (S-ribonuclease binding protein) family protein -0.74 0.31 -0.32
111 AT4G30390 unknown protein; Has 22 Blast hits to 22 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.74 0.31 -0.32
112 AT4G21790 tobamovirus multiplication 1 ATTOM1, tobamovirus multiplication
1		 -0.74 0.31 -0.33
113 AT3G51130 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0183
(InterPro:IPR005373); Has 269 Blast hits to 265 proteins in
123 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi
- 82; Plants - 37; Viruses - 0; Other Eukaryotes - 19
(source: NCBI BLink).		 -0.74 0.32 -0.3
114 AT2G23320 WRKY DNA-binding protein 15 WRKY DNA-binding protein 15 -0.74 0.31 -0.32
115 AT1G70530 cysteine-rich RLK (RECEPTOR-like protein kinase) 3 cysteine-rich RLK (RECEPTOR-like
protein kinase) 3		 -0.74 0.33 -0.31
116 AT2G40270 Protein kinase family protein -0.74 0.31 -0.31
117 AT1G54710 homolog of yeast autophagy 18 (ATG18) H homolog of yeast autophagy 18
(ATG18) H, homolog of yeast
autophagy 18 (ATG18) H		 -0.73 0.28 -0.33
118 AT1G62422 unknown protein; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G12020.1); Has 87 Blast hits to 86 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.73 0.33 -0.33
119 AT5G40690 CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site
(InterPro:IPR018247); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G41730.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.73 0.33 -0.31
120 AT3G52800 A20/AN1-like zinc finger family protein -0.73 0.31 -0.32
121 AT5G17650 glycine/proline-rich protein -0.73 0.3 -0.3
122 AT3G62010 unknown protein; LOCATED IN: cellular_component unknown;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15
growth stages; Has 553 Blast hits to 216 proteins in 93
species: Archae - 0; Bacteria - 124; Metazoa - 193; Fungi -
58; Plants - 108; Viruses - 0; Other Eukaryotes - 70
(source: NCBI BLink).		 -0.73 0.3 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
123 C0190 O-acetyl-L-Serine - O-acetyl-L-Serine cysteine biosynthesis I,
seleno-amino acid biosynthesis 		-0.87 0.46 -0.44 C0190