AT5G53550 : YELLOW STRIPE LIKE 3
Query Information
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AGICode AT5G53550
Description YELLOW STRIPE like 3
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G53550 YELLOW STRIPE like 3 YELLOW STRIPE LIKE 3, YELLOW
STRIPE like 3		 1 0.32 -0.3
2 AT1G31820 Amino acid permease family protein 0.8 0.33 -0.32
3 AT3G26210 cytochrome P450, family 71, subfamily B, polypeptide 23 cytochrome P450, family 71,
subfamily B, polypeptide 23		 0.79 0.33 -0.33
4 AT1G15790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G15780.1); Has 170 Blast hits
to 94 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.77 0.3 -0.32
5 AT3G26220 cytochrome P450, family 71, subfamily B, polypeptide 3 cytochrome P450, family 71,
subfamily B, polypeptide 3		 0.77 0.32 -0.31
6 AT2G17560 high mobility group B4 high mobility group B4, NFD04,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR D4		 -0.75 0.29 -0.32
7 AT4G20110 VACUOLAR SORTING RECEPTOR 7 binding protein of 80 kDa 3;1,
VACUOLAR SORTING RECEPTOR 3;1,
VACUOLAR SORTING RECEPTOR 7		 0.72 0.32 -0.32
8 AT5G44290 Protein kinase superfamily protein 0.71 0.31 -0.31
9 AT5G55480 SHV3-like 1 Glycerophosphodiester
phosphodiesterase (GDPD) like 4,
glycerophosphodiesterase-like 1,
SHV3-like 1		 -0.71 0.33 -0.31
10 AT5G53030 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF688 (InterPro:IPR007789); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G27810.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.7 0.3 -0.33
11 AT4G31140 O-Glycosyl hydrolases family 17 protein -0.7 0.32 -0.33
12 AT3G04720 pathogenesis-related 4 HEVEIN-LIKE, PR-4,
pathogenesis-related 4		 0.69 0.33 -0.29
13 AT5G63950 chromatin remodeling 24 chromatin remodeling 24 -0.69 0.31 -0.33
14 AT2G14610 pathogenesis-related gene 1 PATHOGENESIS-RELATED GENE 1,
PATHOGENESIS-RELATED GENE 1,
pathogenesis-related gene 1		 0.69 0.32 -0.33
15 AT3G17330 evolutionarily conserved C-terminal region 6 evolutionarily conserved
C-terminal region 6		 -0.68 0.31 -0.33
16 AT1G07630 pol-like 5 pol-like 5 0.68 0.32 -0.3
17 AT1G07390 receptor like protein 1 receptor like protein 1, receptor
like protein 1		 0.68 0.31 -0.33
18 AT2G46610 RNA-binding (RRM/RBD/RNP motifs) family protein arginine/serine-rich splicing
factor 31a, arginine/serine-rich
splicing factor 31a		 0.68 0.31 -0.32
19 AT2G32520 alpha/beta-Hydrolases superfamily protein 0.67 0.32 -0.32
20 AT5G03455 Rhodanese/Cell cycle control phosphatase superfamily
protein		 ARSENATE REDUCTASE 2, ARATH;CDC25,
CDC25		 0.67 0.32 -0.32
21 AT5G45380 solute:sodium symporters;urea transmembrane transporters ATDUR3, DEGRADATION OF UREA 3 0.67 0.3 -0.35
22 AT3G28540 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.67 0.32 -0.32
23 AT4G18930 RNA ligase/cyclic nucleotide phosphodiesterase family
protein		 0.66 0.31 -0.33
24 AT2G39210 Major facilitator superfamily protein 0.66 0.3 -0.29
25 AT1G43910 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.66 0.33 -0.31
26 AT1G80370 Cyclin A2;4 Cyclin A2;4 -0.65 0.33 -0.3
27 AT1G70140 formin 8 formin 8, formin 8 0.65 0.3 -0.31
28 AT3G06650 ATP-citrate lyase B-1 ATP-citrate lyase B-1 -0.65 0.33 -0.33
29 AT3G16030 lectin protein kinase family protein CALLUS EXPRESSION OF RBCS 101 0.65 0.31 -0.31
30 AT4G04840 methionine sulfoxide reductase B6 methionine sulfoxide reductase B6,
methionine sulfoxide reductase B6		 -0.65 0.31 -0.32
31 AT5G38780 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.65 0.31 -0.3
32 AT3G61260 Remorin family protein -0.64 0.33 -0.32
33 AT4G35220 Cyclase family protein 0.64 0.31 -0.31
34 AT5G07830 glucuronidase 2 glucuronidase 2, glucuronidase 2 0.64 0.31 -0.33
35 AT4G12010 Disease resistance protein (TIR-NBS-LRR class) family 0.64 0.32 -0.35
36 AT1G01510 NAD(P)-binding Rossmann-fold superfamily protein ANGUSTIFOLIA -0.64 0.31 -0.3
37 AT3G28940 AIG2-like (avirulence induced gene) family protein 0.64 0.31 -0.32
38 AT2G19130 S-locus lectin protein kinase family protein 0.64 0.29 -0.3
39 AT3G11490 rac GTPase activating protein -0.64 0.32 -0.33
40 AT3G26230 cytochrome P450, family 71, subfamily B, polypeptide 24 cytochrome P450, family 71,
subfamily B, polypeptide 24		 0.64 0.29 -0.31
41 AT2G04063 glycine-rich protein -0.64 0.31 -0.3
42 AT2G28890 poltergeist like 4 poltergeist like 4 0.64 0.31 -0.31
43 AT3G47480 Calcium-binding EF-hand family protein 0.64 0.32 -0.33
44 AT4G32650 potassium channel in Arabidopsis thaliana 3 ARABIDOPSIS THALIANA K+ RECTIFYING
CHANNEL 1, A. thaliana
low-K+-tolerant 1, potassium
channel in Arabidopsis thaliana 3,
KC1		 0.63 0.33 -0.32
45 AT4G16515 Encodes a root meristem growth factor (RGF). Belongs to a
family of functionally redundant homologous peptides that
are secreted, tyrosine-sulfated, and expressed mainly in
the stem cell area and the innermost layer of central
columella cells. RGFs are required for maintenance of the
root stem cell niche and transit amplifying cell
proliferation. Members of this family include: At5g60810
(RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350
(RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240
(RGF7), At2g03830 (RGF8) and At5g64770 (RGF9).		 root meristem growth factor 6 -0.63 0.32 -0.32
46 AT5G44820 Nucleotide-diphospho-sugar transferase family protein 0.63 0.33 -0.32
47 AT5G60460 Preprotein translocase Sec, Sec61-beta subunit protein 0.63 0.31 -0.31
48 AT2G25000 WRKY DNA-binding protein 60 ATWRKY60, WRKY DNA-binding protein
60		 0.62 0.31 -0.3
49 AT2G20810 galacturonosyltransferase 10 galacturonosyltransferase 10, LGT4 -0.62 0.31 -0.31
50 AT3G54250 GHMP kinase family protein -0.62 0.3 -0.3
51 AT3G06450 HCO3- transporter family 0.62 0.3 -0.3
52 AT5G61520 Major facilitator superfamily protein 0.62 0.29 -0.32
53 AT1G19250 flavin-dependent monooxygenase 1 flavin-dependent monooxygenase 1 0.62 0.31 -0.31
54 AT3G17160 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 54259
Blast hits to 25265 proteins in 1209 species: Archae - 350;
Bacteria - 10795; Metazoa - 16137; Fungi - 8620; Plants -
3305; Viruses - 957; Other Eukaryotes - 14095 (source: NCBI
BLink).		 -0.62 0.31 -0.33
55 AT3G46280 protein kinase-related 0.61 0.32 -0.31
56 AT3G27200 Cupredoxin superfamily protein -0.61 0.32 -0.33
57 AT1G51890 Leucine-rich repeat protein kinase family protein 0.61 0.33 -0.31
58 AT2G01680 Ankyrin repeat family protein 0.61 0.32 -0.3
59 AT1G69160 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G13980.1); Has 173 Blast hits
to 172 proteins in 54 species: Archae - 0; Bacteria - 0;
Metazoa - 25; Fungi - 33; Plants - 84; Viruses - 2; Other
Eukaryotes - 29 (source: NCBI BLink).		 -0.61 0.3 -0.33
60 AT5G07100 WRKY DNA-binding protein 26 WRKY DNA-binding protein 26 0.61 0.31 -0.3
61 AT5G18840 Major facilitator superfamily protein 0.61 0.3 -0.32
62 AT3G04110 glutamate receptor 1.1 ATGLR1.1, GLUTAMATE RECEPTOR 1,
glutamate receptor 1.1		 0.61 0.32 -0.3
63 AT1G65500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 14 plant structures;
EXPRESSED DURING: 9 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G65486.1); Has 23 Blast hits to 23 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.61 0.33 -0.31
64 AT4G17660 Protein kinase superfamily protein 0.6 0.33 -0.31
65 AT1G70250 receptor serine/threonine kinase, putative 0.6 0.32 -0.33
66 AT5G19810 Proline-rich extensin-like family protein -0.6 0.32 -0.33
67 AT2G33480 NAC domain containing protein 41 NAC domain containing protein 41,
NAC domain containing protein 41		 0.6 0.31 -0.33
68 AT1G03370 C2 calcium/lipid-binding and GRAM domain containing protein 0.6 0.32 -0.33
69 AT2G38080 Laccase/Diphenol oxidase family protein ARABIDOPSIS LACCASE-LIKE
MULTICOPPER OXIDASE 4, IRREGULAR
XYLEM 12, LACCASE 4, LACCASE-LIKE
MULTICOPPER OXIDASE 4		 -0.6 0.32 -0.31
70 AT5G39020 Malectin/receptor-like protein kinase family protein 0.6 0.33 -0.33
71 AT1G30440 Phototropic-responsive NPH3 family protein -0.6 0.33 -0.32
72 AT4G39860 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G22270.1); Has 152 Blast hits
to 146 proteins in 19 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 2; Plants - 146; Viruses - 0; Other
Eukaryotes - 4 (source: NCBI BLink).		 -0.6 0.31 -0.33
73 AT5G60900 receptor-like protein kinase 1 receptor-like protein kinase 1 0.6 0.33 -0.31
74 AT1G12400 Nucleotide excision repair, TFIIH, subunit TTDA 0.59 0.32 -0.31
75 AT1G06520 glycerol-3-phosphate acyltransferase 1 ATGPAT1, glycerol-3-phosphate
acyltransferase 1		 0.59 0.32 -0.33
76 AT2G25360 RING/U-box superfamily protein 0.59 0.32 -0.31
77 AT4G02050 sugar transporter protein 7 sugar transporter protein 7 0.59 0.31 -0.32
78 AT5G63580 flavonol synthase 2 ATFLS2, flavonol synthase 2 0.59 0.31 -0.3
79 AT4G27480 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 0.59 0.31 -0.31
80 AT1G13750 Purple acid phosphatases superfamily protein 0.59 0.33 -0.32
81 AT1G07380 Neutral/alkaline non-lysosomal ceramidase 0.59 0.31 -0.3
82 AT5G53370 pectin methylesterase PCR fragment F PECTIN METHYLESTERASE PCR FRAGMENT
F, pectin methylesterase PCR
fragment F		 0.59 0.31 -0.32
83 AT3G18160 peroxin 3-1 peroxin 3-1 -0.59 0.3 -0.3
84 AT1G04250 AUX/IAA transcriptional regulator family protein AUXIN RESISTANT 3, indole-3-acetic
acid inducible 17		 -0.59 0.3 -0.32
85 AT3G62660 galacturonosyltransferase-like 7 galacturonosyltransferase-like 7 -0.59 0.29 -0.3
86 AT3G60600 vesicle associated protein (AT)VAP, vesicle associated
protein, VAP27,
VAMP/SYNAPTOBREVIN-ASSOCIATED
PROTEIN 27-1		 -0.59 0.32 -0.31
87 AT3G50480 homolog of RPW8 4 homolog of RPW8 4 0.58 0.32 -0.3
88 AT4G16670 Plant protein of unknown function (DUF828) with plant
pleckstrin homology-like region		 0.58 0.32 -0.3
89 AT3G51860 cation exchanger 3 ATCAX3, ATHCX1, CAX1-LIKE, cation
exchanger 3		 0.58 0.32 -0.32
90 AT4G19420 Pectinacetylesterase family protein 0.58 0.31 -0.29
91 AT5G11410 Protein kinase superfamily protein 0.58 0.33 -0.3
92 AT1G53310 phosphoenolpyruvate carboxylase 1 ATPEPC1, phosphoenolpyruvate
carboxylase 1,
PEP(PHOSPHOENOLPYRUVATE)
CARBOXYLASE 1, phosphoenolpyruvate
carboxylase 1		 0.58 0.31 -0.32
93 AT3G61580 Fatty acid/sphingolipid desaturase AtSLD1, sphingoid LCB desaturase 1 -0.58 0.29 -0.27
94 AT3G12530 PSF2 PSF2 -0.57 0.32 -0.31
95 AT5G54250 cyclic nucleotide-gated cation channel 4 cyclic nucleotide-gated cation
channel 4, cyclic nucleotide-gated
cation channel 4, DEFENSE, NO
DEATH 2, HLM1		 0.57 0.32 -0.32
96 AT3G20570 early nodulin-like protein 9 AtENODL9, early nodulin-like
protein 9		 -0.57 0.3 -0.33
97 AT2G36660 poly(A) binding protein 7 poly(A) binding protein 7 -0.57 0.31 -0.3
98 AT2G28570 unknown protein; Has 13 Blast hits to 13 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.57 0.32 -0.34
99 AT5G65640 beta HLH protein 93 beta HLH protein 93 0.57 0.33 -0.31
100 AT5G36910 thionin 2.2 thionin 2.2 -0.57 0.33 -0.32
101 AT5G39785 Protein of unknown function (DUF1666) 0.57 0.31 -0.33
102 AT1G34180 NAC domain containing protein 16 NAC domain containing protein 16,
NAC domain containing protein 16		 0.57 0.33 -0.32
103 AT1G66150 transmembrane kinase 1 transmembrane kinase 1 -0.57 0.29 -0.31
104 AT2G34490 cytochrome P450, family 710, subfamily A, polypeptide 2 cytochrome P450, family 710,
subfamily A, polypeptide 2		 0.57 0.31 -0.34
105 AT1G78000 sulfate transporter 1;2 SELENATE RESISTANT 1, sulfate
transporter 1;2		 0.57 0.32 -0.33
106 AT5G28640 SSXT family protein ANGUSTIFOLIA 3, ARABIDOPSIS
GRF1-INTERACTING FACTOR 1,
GRF1-INTERACTING FACTOR,
GRF1-INTERACTING FACTOR 1		 -0.57 0.3 -0.31
107 AT1G20350 translocase inner membrane subunit 17-1 translocase inner membrane subunit
17-1, translocase inner membrane
subunit 17-1		 0.57 0.3 -0.36
108 AT5G66560 Phototropic-responsive NPH3 family protein -0.57 0.3 -0.33
109 AT4G37590 Phototropic-responsive NPH3 family protein MAB4/ENP/NPY1-LIKE 1, NAKED PINS
IN YUC MUTANTS 5		 -0.56 0.34 -0.31
110 AT5G62350 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.56 0.32 -0.33
111 AT4G39400 Leucine-rich receptor-like protein kinase family protein ATBRI1, BR INSENSITIVE 1,
BRASSINOSTEROID INSENSITIVE 1,
CABBAGE 2, DWARF 2		 -0.56 0.32 -0.31
112 AT3G03970 ARM repeat superfamily protein -0.56 0.32 -0.3
113 AT5G40270 HD domain-containing metal-dependent phosphohydrolase
family protein		 -0.56 0.3 -0.31
114 AT1G52740 histone H2A protein 9 histone H2A protein 9 -0.56 0.31 -0.31
115 AT2G38730 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 -0.56 0.3 -0.32
116 AT4G26540 Leucine-rich repeat receptor-like protein kinase family
protein		 -0.56 0.29 -0.31
117 AT2G26450 Plant invertase/pectin methylesterase inhibitor superfamily 0.55 0.31 -0.3
118 AT1G69720 heme oxygenase 3 heme oxygenase 3 0.55 0.3 -0.35
119 AT3G60690 SAUR-like auxin-responsive protein family 0.55 0.31 -0.33
120 AT3G24660 transmembrane kinase-like 1 transmembrane kinase-like 1 -0.55 0.31 -0.32
121 AT2G27350 OTU-like cysteine protease family protein otubain-like deubiquitinase 1 0.55 0.31 -0.34
122 AT2G06990 RNA helicase, ATP-dependent, SK12/DOB1 protein hua enhancer 2 -0.55 0.31 -0.32
123 AT3G12920 SBP (S-ribonuclease binding protein) family protein BOI-related gene 3 -0.55 0.31 -0.31
124 AT5G04240 Zinc finger (C2H2 type) family protein / transcription
factor jumonji (jmj) family protein		 EARLY FLOWERING 6 -0.55 0.33 -0.32
125 AT1G79660 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G16170.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.54 0.3 -0.3
126 AT4G40000 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.54 0.32 -0.32
127 AT2G47900 tubby like protein 3 tubby like protein 3, tubby like
protein 3		 -0.54 0.3 -0.33
128 AT3G21290 dentin sialophosphoprotein-related -0.54 0.29 -0.31
129 AT1G50380 Prolyl oligopeptidase family protein -0.54 0.33 -0.32
130 AT3G50050 Eukaryotic aspartyl protease family protein -0.53 0.34 -0.32
131 AT2G01890 purple acid phosphatase 8 PURPLE ACID PHOSPHATASE 8, purple
acid phosphatase 8		 -0.53 0.29 -0.3
132 AT5G46070 Guanylate-binding family protein -0.53 0.3 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
133 C0138 Linarin - - - -0.78 0.46 -0.44
134 C0164 MST_1596.8 - - - 0.73 0.47 -0.48
135 C0252 Threonic acid D,L-Threonic acid L-Threonate ascorbic acid degradation -0.71 0.43 -0.45 C0252
136 C0248 Sulfoquinovosyldiacylglycerol-36:3 - Sulfoquinovosyldiacylglycerol sulfolipid biosynthesis -0.71 0.51 -0.49 C0248
137 C0089 Fortunellin - - - -0.68 0.46 -0.5
138 C0229 Robinin - - flavone biosynthesis -0.68 0.45 -0.45
139 C0165 MST_1688.6 - - - 0.67 0.47 -0.44
140 C0173 MST_2301.7 - - - -0.64 0.45 -0.43
141 C0024 2-(Anilinomethyl)pyrrolidine (S)-(+)-2-(anilinomethyl)pyrrolidine - - -0.63 0.43 -0.43