AT5G49030 : ovule abortion 2
Query Information
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AGICode AT5G49030
Description tRNA synthetase class I (I, L, M and V) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G49030 tRNA synthetase class I (I, L, M and V) family protein ovule abortion 2 1 0.32 -0.29
2 AT1G10510 RNI-like superfamily protein embryo defective 2004 0.93 0.33 -0.32
3 AT5G64580 AAA-type ATPase family protein EMBRYO DEFECTIVE 3144 0.91 0.3 -0.31
4 AT1G12800 Nucleic acid-binding, OB-fold-like protein 0.91 0.34 -0.31
5 AT3G51870 Mitochondrial substrate carrier family protein 0.9 0.32 -0.32
6 AT5G46580 pentatricopeptide (PPR) repeat-containing protein 0.9 0.3 -0.29
7 AT5G63420 RNA-metabolising metallo-beta-lactamase family protein embryo defective 2746 0.89 0.34 -0.31
8 AT1G62750 Translation elongation factor EFG/EF2 protein SNOWY COTYLEDON 1, ATSCO1/CPEF-G,
SNOWY COTYLEDON 1		 0.89 0.32 -0.3
9 AT5G44650 Encodes a chloroplast protein that induces tolerance to
multiple environmental stresses and reduces photooxidative
damage.		 Arabidopsis thaliana chloroplast
protein-enhancing stress
tolerance, chloroplast
protein-enhancing stress
tolerance, Ycf3-interacting
protein 1		 0.89 0.32 -0.34
10 AT3G59040 Tetratricopeptide repeat (TPR)-like superfamily protein 0.89 0.32 -0.31
11 AT2G38140 plastid-specific ribosomal protein 4 plastid-specific ribosomal protein
4		 0.89 0.33 -0.32
12 AT4G31850 proton gradient regulation 3 proton gradient regulation 3 0.89 0.29 -0.32
13 AT3G47650 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0.88 0.3 -0.32
14 AT4G36390 Methylthiotransferase 0.88 0.31 -0.35
15 AT3G04340 FtsH extracellular protease family embryo defective 2458 0.88 0.31 -0.34
16 AT3G48110 glycine-tRNA ligases EDD, EMBRYO-DEFECTIVE-DEVELOPMENT
1		 0.88 0.32 -0.33
17 AT1G50450 Saccharopine dehydrogenase 0.88 0.32 -0.33
18 AT4G29060 elongation factor Ts family protein embryo defective 2726 0.87 0.31 -0.31
19 AT2G45270 glycoprotease 1 glycoprotease 1 0.87 0.32 -0.33
20 AT2G34640 plastid transcriptionally active 12 HEMERA, plastid transcriptionally
active 12		 0.87 0.3 -0.3
21 AT3G60750 Transketolase 0.87 0.3 -0.31
22 AT4G20360 RAB GTPase homolog E1B ATRAB8D, RAB GTPase homolog E1B,
RAB GTPase homolog E1B		 0.87 0.3 -0.3
23 AT3G16290 AAA-type ATPase family protein embryo defective 2083 0.87 0.31 -0.31
24 AT1G60230 Radical SAM superfamily protein 0.87 0.31 -0.33
25 AT3G12080 GTP-binding family protein embryo defective 2738 0.87 0.32 -0.33
26 AT3G18390 CRS1 / YhbY (CRM) domain-containing protein embryo defective 1865 0.87 0.32 -0.3
27 AT5G63050 embryo defective 2759 embryo defective 2759 0.87 0.31 -0.3
28 AT5G22640 MORN (Membrane Occupation and Recognition Nexus)
repeat-containing protein		 embryo defective 1211 0.87 0.32 -0.31
29 AT2G21385 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 49
Blast hits to 49 proteins in 20 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses
- 0; Other Eukaryotes - 5 (source: NCBI BLink).		 0.87 0.31 -0.32
30 AT3G04260 plastid transcriptionally active 3 PIGMENT DEFECTIVE 324, plastid
transcriptionally active 3		 0.87 0.33 -0.32
31 AT2G35410 RNA-binding (RRM/RBD/RNP motifs) family protein 0.86 0.31 -0.31
32 AT3G18110 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 1270 0.86 0.33 -0.33
33 AT3G57180 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 BRASSINAZOLE(BRZ) INSENSITIVE PALE
GREEN 2		 0.86 0.32 -0.33
34 AT1G64680 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G03055.1); Has 146 Blast hits
to 146 proteins in 26 species: Archae - 0; Bacteria - 6;
Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other
Eukaryotes - 15 (source: NCBI BLink).		 0.86 0.31 -0.29
35 AT1G70200 RNA-binding (RRM/RBD/RNP motifs) family protein 0.86 0.32 -0.3
36 AT1G36390 Co-chaperone GrpE family protein 0.86 0.31 -0.32
37 AT4G30950 fatty acid desaturase 6 fatty acid desaturase 6, FATTY
ACID DESATURASE C, STEAROYL
DESATURASE DEFICIENCY 4		 0.86 0.31 -0.32
38 AT1G29070 Ribosomal protein L34 0.86 0.31 -0.3
39 AT1G69200 fructokinase-like 2 fructokinase-like 2 0.86 0.33 -0.32
40 AT2G47590 photolyase/blue-light receptor 2 photolyase/blue-light receptor 2 0.86 0.32 -0.33
41 AT5G08650 Small GTP-binding protein 0.86 0.3 -0.32
42 AT1G71720 Nucleic acid-binding proteins superfamily PIGMENT DEFECTIVE 338 0.86 0.32 -0.31
43 AT5G23310 Fe superoxide dismutase 3 Fe superoxide dismutase 3 0.85 0.31 -0.3
44 AT3G10840 alpha/beta-Hydrolases superfamily protein 0.85 0.33 -0.31
45 AT3G13180 NOL1/NOP2/sun family protein / antitermination NusB
domain-containing protein		 0.85 0.31 -0.32
46 AT4G39960 Molecular chaperone Hsp40/DnaJ family protein 0.85 0.31 -0.31
47 AT1G02910 tetratricopeptide repeat (TPR)-containing protein LOW PSII ACCUMULATION1 0.85 0.32 -0.33
48 AT2G20020 RNA-binding CRS1 / YhbY (CRM) domain-containing protein ATCAF1, CAF1 0.85 0.31 -0.3
49 AT2G14880 SWIB/MDM2 domain superfamily protein 0.85 0.32 -0.32
50 AT5G18570 GTP1/OBG family protein ATOBGC, OBG-like protein,
chloroplastic SAR1, EMBRYO
DEFECTIVE 269, EMBRYO DEFECTIVE
3138		 0.85 0.31 -0.32
51 AT3G06980 DEA(D/H)-box RNA helicase family protein 0.85 0.32 -0.31
52 AT2G31840 Thioredoxin superfamily protein Mesophyll-cell RNAi Library line
7-like		 0.84 0.33 -0.31
53 AT3G21300 RNA methyltransferase family protein 0.84 0.31 -0.29
54 AT5G11270 overexpressor of cationic peroxidase 3 overexpressor of cationic
peroxidase 3		 0.84 0.34 -0.31
55 AT2G18940 Tetratricopeptide repeat (TPR)-like superfamily protein 0.83 0.33 -0.32
56 AT5G42765 INVOLVED IN: biological_process unknown; LOCATED IN:
thylakoid, chloroplast thylakoid membrane, chloroplast;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Twin-arginine
translocation pathway, signal sequence
(InterPro:IPR006311); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.83 0.33 -0.33
57 AT2G41680 NADPH-dependent thioredoxin reductase C NADPH-dependent thioredoxin
reductase C		 0.83 0.3 -0.32
58 AT1G79560 FTSH protease 12 EMBRYO DEFECTIVE 1047, EMBRYO
DEFECTIVE 156, EMBRYO DEFECTIVE
36, FTSH protease 12		 0.83 0.31 -0.31
59 AT1G32200 phospholipid/glycerol acyltransferase family protein ACYLTRANSFERASE 1, ATS1 0.83 0.32 -0.32
60 AT4G16390 pentatricopeptide (PPR) repeat-containing protein suppressor of variegation 7 0.83 0.31 -0.31
61 AT3G26744 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 A. THALIANA INDUCER OF CBP
EXPRESSION 1, INDUCER OF CBF
EXPRESSION 1, SCREAM		 0.83 0.33 -0.31
62 AT5G16715 ATP binding;valine-tRNA ligases;aminoacyl-tRNA
ligases;nucleotide binding;ATP binding;aminoacyl-tRNA
ligases		 embryo defective 2247 0.83 0.3 -0.31
63 AT5G55580 Mitochondrial transcription termination factor family
protein		 0.83 0.31 -0.3
64 AT3G25470 bacterial hemolysin-related 0.83 0.32 -0.31
65 AT4G05590 CONTAINS InterPro DOMAIN/s: Uncharacterised protein family
UPF0041 (InterPro:IPR005336); BEST Arabidopsis thaliana
protein match is: Uncharacterised protein family (UPF0041)
(TAIR:AT4G22310.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.72 0.33 -0.31
66 AT3G12760 CONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation
protein (InterPro:IPR014764), Protein of unknown function
DUF298 (InterPro:IPR005176), UBA-like (InterPro:IPR009060);
BEST Arabidopsis thaliana protein match is: Domain of
unknown function (DUF298) (TAIR:AT1G15860.2); Has 857 Blast
hits to 855 proteins in 202 species: Archae - 0; Bacteria -
0; Metazoa - 482; Fungi - 154; Plants - 139; Viruses - 0;
Other Eukaryotes - 82 (source: NCBI BLink).		 -0.71 0.32 -0.31
67 AT4G29270 HAD superfamily, subfamily IIIB acid phosphatase -0.68 0.32 -0.33
68 AT5G18170 glutamate dehydrogenase 1 glutamate dehydrogenase 1 -0.67 0.3 -0.33
69 AT1G05280 Protein of unknown function (DUF604) -0.66 0.33 -0.32
70 AT3G15510 NAC domain containing protein 2 Arabidopsis NAC domain containing
protein 56, NAC domain containing
protein 2, NAC domain containing
protein 2, NAC-REGULATED SEED
MORPHOLOGY 1		 -0.65 0.32 -0.31
71 AT5G48110 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.64 0.33 -0.35
72 AT2G38700 mevalonate diphosphate decarboxylase 1 ATMVD1, mevalonate diphosphate
decarboxylase 1		 -0.63 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
73 C0133 Kaempferol-3,7-O-α-dirhamnopyranoside Kaempferol-3,7-O-α-L-dirhamnopyranoside Kaempferol-3-rhamnoside-7-rhamnoside kaempferol glucoside biosynthesis (Arabidopsis) 0.85 0.44 -0.45 C0133