AT5G48560 : -
Query Information
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AGICode AT5G48560
Description basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G48560 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 1 0.32 -0.32
2 AT5G14000 NAC domain containing protein 84 NAC domain containing protein 84,
NAC domain containing protein 84		 0.78 0.33 -0.3
3 AT1G74500 activation-tagged BRI1(brassinosteroid-insensitive
1)-suppressor 1		 activation-tagged
BRI1(brassinosteroid-insensitive
1)-suppressor 1, activation-tagged
BRI1(brassinosteroid-insensitive
1)-suppressor 1, TARGET OF
MONOPTEROS 7		 0.78 0.31 -0.31
4 AT3G54770 RNA-binding (RRM/RBD/RNP motifs) family protein 0.77 0.3 -0.35
5 AT5G17330 glutamate decarboxylase glutamate decarboxylase, GLUTAMATE
DECARBOXYLASE 1		 0.77 0.34 -0.31
6 AT3G15357 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: shoot apex,
hypocotyl, root, leaf; Has 6931 Blast hits to 2036 proteins
in 230 species: Archae - 7; Bacteria - 933; Metazoa - 1824;
Fungi - 836; Plants - 482; Viruses - 218; Other Eukaryotes
- 2631 (source: NCBI BLink).		 0.76 0.32 -0.32
7 AT4G00080 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 unfertilized embryo sac 11 0.75 0.32 -0.31
8 AT1G36060 Integrase-type DNA-binding superfamily protein 0.75 0.33 -0.32
9 AT3G21510 histidine-containing phosphotransmitter 1 histidine-containing
phosphotransmitter 1		 0.75 0.33 -0.34
10 AT2G47270 sequence-specific DNA binding transcription
factors;transcription regulators		 UPBEAT1 0.74 0.31 -0.33
11 AT1G13300 myb-like transcription factor family protein HYPERSENSITIVITY TO LOW
PI-ELICITED PRIMARY ROOT
SHORTENING 1		 0.74 0.32 -0.32
12 AT2G44790 uclacyanin 2 uclacyanin 2 0.74 0.31 -0.32
13 AT3G59220 pirin ATPIRIN1, pirin, PRN1 0.74 0.29 -0.33
14 AT2G25980 Mannose-binding lectin superfamily protein 0.74 0.3 -0.34
15 AT5G40730 arabinogalactan protein 24 arabinogalactan protein 24,
ARABIDOPSIS THALIANA
ARABINOGALACTAN PROTEIN 24		 0.73 0.33 -0.33
16 AT1G02900 rapid alkalinization factor 1 RAPID ALKALINIZATION FACTOR 1,
rapid alkalinization factor 1,
RALF-LIKE 1		 0.72 0.31 -0.3
17 AT5G56950 nucleosome assembly protein 1;3 nucleosome assembly protein 1;3,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A 03,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A3		 0.72 0.31 -0.32
18 AT5G63660 Scorpion toxin-like knottin superfamily protein LOW-MOLECULAR-WEIGHT CYSTEINE-RICH
74, PDF2.5		 0.72 0.31 -0.34
19 AT2G20570 GBF's pro-rich region-interacting factor 1 ARABIDOPSIS GOLDEN2-LIKE 1,
GOLDEN2-LIKE 1, GBF's pro-rich
region-interacting factor 1		 -0.72 0.34 -0.32
20 AT1G77330 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.71 0.31 -0.33
21 AT5G62130 Per1-like family protein -0.7 0.32 -0.34
22 AT5G62000 auxin response factor 2 ARF1-BINDING PROTEIN, auxin
response factor 2, HLS1
SUPPRESSOR, ORESARA 14		 -0.7 0.33 -0.3
23 AT5G62340 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.7 0.31 -0.29
24 AT5G14690 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G01516.1); Has 86 Blast hits
to 86 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 2; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.7 0.31 -0.31
25 AT2G23760 BEL1-like homeodomain 4 BEL1-like homeodomain 4, SAWTOOTH
2		 -0.7 0.33 -0.32
26 AT5G46880 homeobox-7 homeobox-7, HOMEODOMAIN GLABROUS 5 -0.69 0.31 -0.3
27 AT4G30170 Peroxidase family protein 0.69 0.31 -0.33
28 AT3G57550 guanylate kinase guanylate kinase, GUANYLATE KINAS
2		 0.69 0.32 -0.33
29 AT5G25220 KNOTTED1-like homeobox gene 3 KNOTTED1-like homeobox gene 3 -0.69 0.31 -0.3
30 AT5G57090 Auxin efflux carrier family protein AGRAVITROPIC ROOT, AGRAVITROPIC
ROOT 1, ARABIDOPSIS THALIANA
PIN-FORMED 2, ETHYLENE INSENSITIVE
ROOT 1, MM31, PIN-FORMED 2, WAVY
ROOTS 6		 0.69 0.3 -0.32
31 AT3G13040 myb-like HTH transcriptional regulator family protein -0.69 0.3 -0.32
32 AT2G24300 Calmodulin-binding protein 0.68 0.32 -0.33
33 AT5G59520 ZRT/IRT-like protein 2 ZRT/IRT-like protein 2 0.68 0.33 -0.3
34 AT5G17820 Peroxidase superfamily protein 0.68 0.31 -0.3
35 AT1G52070 Mannose-binding lectin superfamily protein 0.68 0.32 -0.31
36 AT4G13660 pinoresinol reductase 2 ATPRR2, pinoresinol reductase 2 0.68 0.3 -0.32
37 AT4G02420 Concanavalin A-like lectin protein kinase family protein -0.67 0.32 -0.3
38 AT4G04750 Major facilitator superfamily protein -0.67 0.31 -0.33
39 AT3G16440 myrosinase-binding protein-like protein-300B myrosinase-binding protein-like
protein-300B, maternal effect
embryo arrest 36,
myrosinase-binding protein-like
protein-300B		 0.67 0.29 -0.3
40 AT4G17800 Predicted AT-hook DNA-binding family protein 0.67 0.34 -0.32
41 AT2G41660 Protein of unknown function, DUF617 mizu-kussei 1 0.67 0.31 -0.3
42 AT2G30790 photosystem II subunit P-2 photosystem II subunit P-2 -0.67 0.3 -0.33
43 AT2G41970 Protein kinase superfamily protein 0.67 0.29 -0.31
44 AT4G15680 Thioredoxin superfamily protein 0.67 0.31 -0.32
45 AT1G12160 Flavin-binding monooxygenase family protein 0.67 0.31 -0.31
46 AT2G03530 ureide permease 2 ARABIDOPSIS THALIANA UREIDE
PERMEASE 2, ureide permease 2		 -0.67 0.31 -0.31
47 AT5G03650 starch branching enzyme 2.2 starch branching enzyme 2.2 -0.67 0.34 -0.32
48 AT2G23630 SKU5 similar 16 SKU5 similar 16 0.67 0.34 -0.31
49 AT2G37130 Peroxidase superfamily protein 0.66 0.33 -0.31
50 AT2G19780 Leucine-rich repeat (LRR) family protein -0.66 0.32 -0.33
51 AT5G05880 UDP-Glycosyltransferase superfamily protein 0.66 0.31 -0.32
52 AT1G01640 BTB/POZ domain-containing protein 0.65 0.32 -0.31
53 AT1G68540 NAD(P)-binding Rossmann-fold superfamily protein cinnamoyl coA reductase-like 6,
tetraketide alpha-pyrone reductase
2		 -0.65 0.32 -0.31
54 AT1G05030 Major facilitator superfamily protein -0.65 0.34 -0.3
55 AT2G21340 MATE efflux family protein -0.65 0.32 -0.33
56 AT1G67330 Protein of unknown function (DUF579) 0.65 0.32 -0.31
57 AT1G56680 Chitinase family protein 0.65 0.31 -0.33
58 AT3G08770 lipid transfer protein 6 lipid transfer protein 6 -0.65 0.32 -0.32
59 AT4G27840 SNARE-like superfamily protein -0.65 0.33 -0.32
60 AT5G65480 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G38060.2); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.64 0.32 -0.33
61 AT5G54040 Cysteine/Histidine-rich C1 domain family protein 0.64 0.33 -0.33
62 AT4G14090 UDP-Glycosyltransferase superfamily protein -0.64 0.31 -0.31
63 AT3G60190 DYNAMIN-like 1E DYNAMIN-like 1E, ARABIDOPSIS
DYNAMIN-LIKE 4, DYNAMIN-LIKE
PROTEIN 2, DYNAMIN-like 1E,
DYNAMIN-RELATED PROTEIN 1E,
ENHANCED DISEASE RESISTANCE 3		 -0.63 0.31 -0.31
64 AT1G30160 Protein of unknown function (DUF295) -0.63 0.33 -0.31
65 AT4G18130 phytochrome E phytochrome E -0.63 0.3 -0.33
66 AT1G20900 Predicted AT-hook DNA-binding family protein AT-hook motif nuclear-localized
protein 27, ESCAROLA, ORESARA 7		 0.63 0.31 -0.31
67 AT4G37160 SKU5 similar 15 SKU5 similar 15 0.63 0.32 -0.28
68 AT3G50010 Cysteine/Histidine-rich C1 domain family protein 0.63 0.32 -0.31
69 AT4G27590 Heavy metal transport/detoxification superfamily protein 0.63 0.31 -0.34
70 AT1G80460 Actin-like ATPase superfamily protein GLI1, nonhost resistance to P. s.
phaseolicola 1		 0.63 0.3 -0.33
71 AT3G05350 Metallopeptidase M24 family protein -0.62 0.32 -0.31
72 AT1G15040 Class I glutamine amidotransferase-like superfamily protein 0.62 0.32 -0.32
73 AT5G05460 Glycosyl hydrolase family 85 AtENGase85A,
Endo-beta-N-acetyglucosaminidase
85A		 0.62 0.3 -0.28
74 AT4G30290 xyloglucan endotransglucosylase/hydrolase 19 XYLOGLUCAN
ENDOTRANSGLUCOSYLASE/HYDROLASE 19,
xyloglucan
endotransglucosylase/hydrolase 19		 0.62 0.3 -0.3
75 AT3G51910 heat shock transcription factor A7A ARABIDOPSIS THALIANA HEAT SHOCK
TRANSCRIPTION FACTOR A7A, heat
shock transcription factor A7A		 0.62 0.32 -0.32
76 AT1G17060 cytochrome p450 72c1 CHIBI 2, cytochrome p450 72c1,
SHRINK 1, SUPPRESSOR OF PHYB-4 7		 0.62 0.31 -0.32
77 AT1G04610 YUCCA 3 YUCCA 3 0.62 0.3 -0.29
78 AT4G34880 Amidase family protein 0.62 0.32 -0.3
79 AT3G44510 alpha/beta-Hydrolases superfamily protein 0.61 0.35 -0.33
80 AT2G35270 Predicted AT-hook DNA-binding family protein GIANT KILLER 0.61 0.3 -0.33
81 AT5G52910 timeless family protein TIMELESS 0.61 0.33 -0.29
82 AT5G07180 ERECTA-like 2 ERECTA-like 2 -0.61 0.33 -0.34
83 AT2G37890 Mitochondrial substrate carrier family protein 0.6 0.29 -0.3
84 AT1G12990 beta-1,4-N-acetylglucosaminyltransferase family protein -0.6 0.32 -0.33
85 AT5G53980 homeobox protein 52 homeobox protein 52, homeobox
protein 52		 0.6 0.32 -0.33
86 AT1G02300 Cysteine proteinases superfamily protein -0.6 0.33 -0.31
87 AT3G22425 imidazoleglycerol-phosphate dehydratase HISN5A,
imidazoleglycerol-phosphate
dehydratase		 -0.6 0.31 -0.32
88 AT5G49870 Mannose-binding lectin superfamily protein 0.6 0.34 -0.32
89 AT5G44000 Glutathione S-transferase family protein -0.59 0.31 -0.31
90 AT5G67280 receptor-like kinase receptor-like kinase -0.59 0.3 -0.32
91 AT3G62380 CONTAINS InterPro DOMAIN/s: F-box associated interaction
domain (InterPro:IPR017451); BEST Arabidopsis thaliana
protein match is: F-box family protein (TAIR:AT1G71320.1);
Has 422 Blast hits to 419 proteins in 26 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 420;
Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).		 -0.59 0.3 -0.3
92 AT4G26950 Protein of unknown function, DUF584 -0.59 0.33 -0.31
93 AT1G21890 nodulin MtN21 /EamA-like transporter family protein -0.59 0.33 -0.3
94 AT1G50590 RmlC-like cupins superfamily protein -0.59 0.31 -0.32
95 AT3G57600 Integrase-type DNA-binding superfamily protein -0.59 0.34 -0.32
96 AT3G59580 Plant regulator RWP-RK family protein -0.58 0.3 -0.3
97 AT3G45680 Major facilitator superfamily protein -0.58 0.32 -0.31
98 AT1G28610 GDSL-like Lipase/Acylhydrolase superfamily protein -0.58 0.33 -0.31
99 AT4G34680 GATA transcription factor 3 GATA transcription factor 3 -0.58 0.3 -0.31
100 AT1G48260 CBL-interacting protein kinase 17 CBL-interacting protein kinase
17, SNF1-RELATED PROTEIN KINASE
3.21		 -0.58 0.31 -0.31
101 AT1G77270 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G07730.1); Has 428 Blast hits
to 388 proteins in 92 species: Archae - 0; Bacteria - 31;
Metazoa - 189; Fungi - 10; Plants - 97; Viruses - 0; Other
Eukaryotes - 101 (source: NCBI BLink).		 -0.58 0.32 -0.33
102 AT4G16490 ARM repeat superfamily protein -0.58 0.34 -0.31
103 AT5G57190 phosphatidylserine decarboxylase 2 phosphatidylserine decarboxylase 2 -0.57 0.3 -0.32
104 AT4G09560 Protease-associated (PA) RING/U-box zinc finger family
protein		 -0.57 0.3 -0.33
105 AT1G12820 auxin signaling F-box 3 auxin signaling F-box 3 -0.57 0.31 -0.32
106 AT1G32360 Zinc finger (CCCH-type) family protein -0.57 0.29 -0.31
107 AT1G26130 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 -0.57 0.3 -0.3
108 AT2G32860 beta glucosidase 33 beta glucosidase 33 -0.57 0.33 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
109 C0142 Malonic acid - Malonate fatty acid biosynthesis (plant mitochondria) -0.63 0.31 -0.32 C0142
110 C0232 Shikimic acid - Shikimate phenylpropanoid biosynthesis,
chorismate biosynthesis,
simple coumarins biosynthesis 		-0.62 0.3 -0.31 C0232