AT5G47960 : RAB GTPase homolog A4C
Query Information
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AGICode AT5G47960
Description RAB GTPase homolog A4C
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G47960 RAB GTPase homolog A4C RAB GTPase homolog A4C, RAB GTPase
homolog A4C, SMALL MOLECULAR
WEIGHT G-PROTEIN 1		 1 0.28 -0.32
2 AT3G25780 allene oxide cyclase 3 allene oxide cyclase 3 0.83 0.33 -0.34
3 AT2G17290 Calcium-dependent protein kinase family protein ARABIDOPSIS THALIANA
CALMODULIN-DOMAIN PROTEIN KINASE
3, ARABIDOPSIS THALIANA
CALCIUM-DEPENDENT PROTEIN KINASE
6, calcium dependent protein
kinase 6		 0.83 0.34 -0.31
4 AT1G19180 jasmonate-zim-domain protein 1 jasmonate-zim-domain protein 1,
TIFY10A		 0.82 0.3 -0.34
5 AT2G35930 plant U-box 23 plant U-box 23 0.8 0.33 -0.32
6 AT4G31800 WRKY DNA-binding protein 18 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 18, WRKY
DNA-binding protein 18		 0.78 0.32 -0.32
7 AT3G13790 Glycosyl hydrolases family 32 protein ATBFRUCT1, ARABIDOPSIS THALIANA
CELL WALL INVERTASE 1		 0.78 0.31 -0.32
8 AT2G28470 beta-galactosidase 8 beta-galactosidase 8 -0.77 0.32 -0.32
9 AT3G50260 cooperatively regulated by ethylene and jasmonate 1 ATERF#011, cooperatively regulated
by ethylene and jasmonate 1, DREB
AND EAR MOTIF PROTEIN 1		 0.77 0.33 -0.33
10 AT3G60450 Phosphoglycerate mutase family protein 0.77 0.31 -0.32
11 AT4G21750 Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein		 MERISTEM LAYER 1 -0.77 0.32 -0.33
12 AT4G25390 Protein kinase superfamily protein 0.77 0.32 -0.29
13 AT5G26030 ferrochelatase 1 ATFC-I, FC-I, ferrochelatase 1 0.76 0.33 -0.31
14 AT5G46780 VQ motif-containing protein 0.76 0.31 -0.32
15 AT2G44500 O-fucosyltransferase family protein 0.76 0.32 -0.3
16 AT4G38690 PLC-like phosphodiesterases superfamily protein -0.76 0.32 -0.31
17 AT4G30280 xyloglucan endotransglucosylase/hydrolase 18 XYLOGLUCAN
ENDOTRANSGLUCOSYLASE/HYDROLASE 18,
xyloglucan
endotransglucosylase/hydrolase 18		 0.75 0.32 -0.33
18 AT4G39670 Glycolipid transfer protein (GLTP) family protein 0.75 0.32 -0.32
19 AT5G01240 like AUXIN RESISTANT 1 like AUXIN RESISTANT 1 -0.75 0.31 -0.3
20 AT3G62720 xylosyltransferase 1 ATXT1, xylosyltransferase 1, XYG
XYLOSYLTRANSFERASE 1		 0.74 0.32 -0.34
21 AT1G54780 thylakoid lumen 18.3 kDa protein AtTLP18.3, thylakoid lumen protein
18.3		 -0.74 0.32 -0.34
22 AT1G16750 Protein of unknown function, DUF547 -0.73 0.3 -0.31
23 AT2G22880 VQ motif-containing protein 0.73 0.31 -0.32
24 AT5G26790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G06475.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.73 0.32 -0.3
25 AT1G62030 Cysteine/Histidine-rich C1 domain family protein -0.73 0.31 -0.32
26 AT2G27310 F-box family protein 0.73 0.31 -0.31
27 AT1G72280 endoplasmic reticulum oxidoreductins 1 endoplasmic reticulum
oxidoreductins 1, endoplasmic
reticulum oxidoreductins 1		 0.73 0.32 -0.33
28 AT4G10390 Protein kinase superfamily protein 0.73 0.32 -0.32
29 AT3G18750 with no lysine (K) kinase 6 ARABIDOPSIS THALIANA WITH NO K 6,
with no lysine (K) kinase 6, ZIK5		 -0.72 0.31 -0.32
30 AT5G63780 RING/FYVE/PHD zinc finger superfamily protein shoot apical meristem arrest 1 -0.72 0.31 -0.31
31 AT4G14770 TESMIN/TSO1-like CXC 2 TESMIN/TSO1-LIKE CXC 2,
TESMIN/TSO1-like CXC 2		 -0.72 0.32 -0.32
32 AT2G30570 photosystem II reaction center W photosystem II reaction center W -0.72 0.32 -0.32
33 AT5G35735 Auxin-responsive family protein 0.72 0.32 -0.32
34 AT2G41330 Glutaredoxin family protein -0.71 0.32 -0.32
35 AT3G19480 D-3-phosphoglycerate dehydrogenase -0.71 0.31 -0.32
36 AT4G28680 L-tyrosine decarboxylase L-tyrosine decarboxylase,
L-TYROSINE DECARBOXYLASE 1		 -0.71 0.32 -0.33
37 AT2G27080 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.71 0.32 -0.33
38 AT4G10470 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G33050.2); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.71 0.32 -0.31
39 AT5G46110 Glucose-6-phosphate/phosphate translocator-related ACCLIMATION OF PHOTOSYNTHESIS TO
ENVIRONMENT 2, triose-phosphate
⁄ phosphate translocator		 -0.71 0.31 -0.32
40 AT1G23740 Oxidoreductase, zinc-binding dehydrogenase family protein alkenal/one oxidoreductase -0.71 0.32 -0.32
41 AT2G40020 Nucleolar histone methyltransferase-related protein -0.71 0.32 -0.34
42 AT2G01620 RNI-like superfamily protein maternal effect embryo arrest 11 -0.7 0.32 -0.31
43 AT2G37630 myb-like HTH transcriptional regulator family protein ASYMMETRIC LEAVES 1, MYB DOMAIN
PROTEIN 91, ARABIDOPSIS
PHANTASTICA-LIKE 1, MYB DOMAIN
PROTEIN 91		 -0.7 0.32 -0.32
44 AT5G47220 ethylene responsive element binding factor 2 ETHYLENE RESPONSE FACTOR- 2,
ETHYLENE RESPONSIVE ELEMENT
BINDING FACTOR 2, ethylene
responsive element binding factor
2		 0.7 0.31 -0.33
45 AT2G18690 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
membrane; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF975 (InterPro:IPR010380);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G18680.1); Has 213 Blast hits to 211 proteins in
20 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi -
0; Plants - 205; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.7 0.31 -0.31
46 AT3G11560 LETM1-like protein -0.69 0.34 -0.33
47 AT1G17840 white-brown complex homolog protein 11 ATP-binding cassette G11,
AtABCG11, ARABIDOPSIS THALIANA
WHITE-BROWN COMPLEX HOMOLOG
PROTEIN 11, CUTICULAR DEFECT AND
ORGAN FUSION 1, DESPERADO,
white-brown complex homolog
protein 11		 -0.69 0.31 -0.32
48 AT4G00755 F-box family protein -0.69 0.3 -0.3
49 AT5G10480 Protein-tyrosine phosphatase-like, PTPLA PASTICCINO 2, PEPINO -0.69 0.32 -0.33
50 AT2G46380 Protein of unknown function (DUF3133) -0.69 0.3 -0.3
51 AT3G61870 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast inner membrane, chloroplast
envelope; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 14 growth stages; Has 200 Blast hits to 200
proteins in 73 species: Archae - 0; Bacteria - 112; Metazoa
- 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes
- 35 (source: NCBI BLink).		 -0.69 0.3 -0.32
52 AT5G08070 TCP domain protein 17 TCP domain protein 17 -0.69 0.29 -0.31
53 AT5G56850 unknown protein; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to
34131 proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses -
0; Other Eukaryotes - 9610 (source: NCBI BLink).		 -0.69 0.32 -0.31
54 AT5G42030 ABL interactor-like protein 4 ABL interactor-like protein 4 -0.69 0.31 -0.31
55 AT2G32020 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.68 0.32 -0.32
56 AT3G26932 dsRNA-binding protein 3 dsRNA-binding protein 3 -0.68 0.3 -0.29
57 AT3G63010 alpha/beta-Hydrolases superfamily protein ATGID1B, GA INSENSITIVE DWARF1B 0.68 0.33 -0.33
58 AT3G02380 CONSTANS-like 2 CONSTANS-LIKE 2, CONSTANS-like 2 -0.68 0.33 -0.31
59 AT1G26210 SOB five-like 1 SOB FIVE-LIKE 1, SOB five-like 1 -0.68 0.31 -0.32
60 AT4G21650 Subtilase family protein -0.68 0.31 -0.31
61 AT5G04870 calcium dependent protein kinase 1 ATCPK1, calcium dependent protein
kinase 1		 0.68 0.33 -0.31
62 AT2G24540 Galactose oxidase/kelch repeat superfamily protein ATTENUATED FAR-RED RESPONSE -0.68 0.33 -0.31
63 AT3G09940 monodehydroascorbate reductase ARABIDOPSIS THALIANA
MONODEHYDROASCORBATE REDUCTASE 3,
MONODEHYDROASCORBATE REDUCTASE 2,
MONODEHYDROASCORBATE REDUCTASE 3,
monodehydroascorbate reductase		 0.68 0.32 -0.31
64 AT2G42190 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G57930.2); Has 1381 Blast hits
to 1230 proteins in 175 species: Archae - 3; Bacteria - 25;
Metazoa - 672; Fungi - 135; Plants - 127; Viruses - 30;
Other Eukaryotes - 389 (source: NCBI BLink).		 -0.67 0.33 -0.32
65 AT3G02690 nodulin MtN21 /EamA-like transporter family protein -0.67 0.32 -0.31
66 AT4G26520 Aldolase superfamily protein -0.67 0.33 -0.32
67 AT2G47620 SWITCH/sucrose nonfermenting 3A SWITCH/sucrose nonfermenting 3A,
CHB1, SWITCH/sucrose nonfermenting
3A		 -0.67 0.33 -0.32
68 AT2G46740 D-arabinono-1,4-lactone oxidase family protein 0.67 0.29 -0.32
69 AT3G30460 RING/U-box superfamily protein -0.67 0.3 -0.29
70 AT4G01480 pyrophosphorylase 5 pyrophosphorylase 5,
pyrophosphorylase 5		 0.67 0.32 -0.33
71 AT5G54490 pinoid-binding protein 1 pinoid-binding protein 1 0.67 0.3 -0.36
72 AT2G35800 mitochondrial substrate carrier family protein S-adenosyl methionine
transporter-like		 -0.67 0.34 -0.31
73 AT3G57190 peptide chain release factor, putative peptide chain release factor 3 -0.67 0.32 -0.3
74 AT5G04530 3-ketoacyl-CoA synthase 19 3-ketoacyl-CoA synthase 19 -0.67 0.31 -0.32
75 AT3G26980 membrane-anchored ubiquitin-fold protein 4 precursor membrane-anchored ubiquitin-fold
protein 4 precursor		 0.67 0.35 -0.32
76 AT5G66550 Maf-like protein -0.67 0.31 -0.32
77 AT1G02400 gibberellin 2-oxidase 6 Arabidopsis thaliana gibberellin
2-oxidase 4, ARABIDOPSIS THALIANA
GIBBERELLIN 2-OXIDASE 6,
DOWNSTREAM TARGET OF AGL15 1,
gibberellin 2-oxidase 6		 0.66 0.32 -0.32
78 AT3G02110 serine carboxypeptidase-like 25 serine carboxypeptidase-like 25 -0.66 0.29 -0.32
79 AT3G61830 auxin response factor 18 auxin response factor 18 -0.66 0.3 -0.33
80 AT5G65685 UDP-Glycosyltransferase superfamily protein -0.66 0.32 -0.3
81 AT5G12110 Glutathione S-transferase, C-terminal-like;Translation
elongation factor EF1B/ribosomal protein S6		 -0.66 0.34 -0.3
82 AT5G01830 ARM repeat superfamily protein 0.66 0.33 -0.31
83 AT3G04450 Homeodomain-like superfamily protein -0.66 0.33 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
84 C0119 Indole-3-ylmethyl-glucosinolate - indol-3-ylmethyl glucosinolate indole glucosinolate breakdown (active in intact plant cell),
indole glucosinolate breakdown (insect chewing induced),
glucosinolate biosynthesis from tryptophan 		0.66 0.44 -0.46 C0119