AT5G39640 : -
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AGICode AT5G39640
Description Putative endonuclease or glycosyl hydrolase
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G39640 Putative endonuclease or glycosyl hydrolase 1 0.3 -0.3
2 AT5G23770 DOMAIN OF UNKNOWN FUNCTION 724 8 DOMAIN OF UNKNOWN FUNCTION 724 8,
DOMAIN OF UNKNOWN FUNCTION 724 8
0.73 0.32 -0.32
3 AT2G15700 transposable element gene 0.72 0.34 -0.31
4 AT4G14530 BEST Arabidopsis thaliana protein match is: AGAMOUS-like 97
(TAIR:AT1G46408.1); Has 21 Blast hits to 21 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
0.71 0.31 -0.32
5 AT5G59340 WUSCHEL related homeobox 2 WUSCHEL related homeobox 2 0.71 0.32 -0.33
6 AT5G24560 phloem protein 2-B12 phloem protein 2-B12, phloem
protein 2-B12
0.7 0.31 -0.33
7 AT5G20690 Leucine-rich repeat protein kinase family protein 0.69 0.34 -0.31
8 AT2G14835 RING/U-box superfamily protein -0.67 0.32 -0.32
9 AT4G37840 hexokinase-like 3 hexokinase-like 3 0.67 0.33 -0.31
10 AT3G51200 SAUR-like auxin-responsive protein family 0.67 0.31 -0.31
11 AT2G34370 Pentatricopeptide repeat (PPR) superfamily protein 0.67 0.31 -0.32
12 AT5G54430 Adenine nucleotide alpha hydrolases-like superfamily
protein
ATPHOS32, PHOS32 -0.67 0.33 -0.31
13 AT5G27190 transposable element gene 0.67 0.34 -0.3
14 AT5G21010 BTB-POZ and MATH domain 5 BTB-POZ AND MATH DOMAIN 5, BTB-POZ
and MATH domain 5
-0.66 0.29 -0.33
15 AT2G38830 Ubiquitin-conjugating enzyme/RWD-like protein -0.66 0.34 -0.31
16 AT3G23930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: hypocotyl; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G13540.1); Has 10639 Blast hits to 7432 proteins
in 646 species: Archae - 82; Bacteria - 826; Metazoa -
5047; Fungi - 759; Plants - 314; Viruses - 86; Other
Eukaryotes - 3525 (source: NCBI BLink).
0.65 0.3 -0.31
17 AT4G12110 sterol-4alpha-methyl oxidase 1-1 ATSMO1-1, sterol-4alpha-methyl
oxidase 1-1
-0.65 0.32 -0.31
18 AT5G28620 protein kinase C-related -0.65 0.32 -0.31
19 AT1G74580 Pentatricopeptide repeat (PPR) superfamily protein 0.65 0.35 -0.29
20 AT3G30570 transposable element gene 0.65 0.32 -0.3
21 AT2G03410 Mo25 family protein -0.64 0.31 -0.31
22 AT2G14040 transposable element gene 0.64 0.33 -0.3
23 AT1G52470 alpha/beta-Hydrolases superfamily protein -0.63 0.32 -0.34
24 AT3G04970 DHHC-type zinc finger family protein -0.63 0.3 -0.31
25 AT1G53840 pectin methylesterase 1 pectin methylesterase 1, pectin
methylesterase 1
-0.63 0.31 -0.33
26 AT5G58180 Synaptobrevin family protein ATYKT62, YKT62 -0.63 0.33 -0.33
27 AT3G49480 Protein with RNI-like/FBD-like domains -0.63 0.32 -0.33
28 AT1G51990 O-methyltransferase family protein 0.63 0.32 -0.31
29 AT2G19250 pseudogene, similar to Magnesium-chelatase subunit chlD,
chloroplast precursor (Mg- protoporphyrin IX chelatase)
(Mg-chelatase subunit D). (Common tobacco), similar to
SP|O24133 Magnesium-chelatase subunit chlD, chloroplast
precursor (Mg-protoporphyrin IX chelatase) (Mg-chelatase
subunit D) {Nicotiana tabacum}; blastp match of 78%
identity and 5.0e-07 P-value to SP|O24133|CHLD_TOBAC
Magnesium-chelatase subunit chlD, chloroplast precursor
(Mg- protoporphyrin IX chelatase) (Mg-chelatase subunit D).
(Common tobacco) {Nicotiana tabacum}
0.63 0.3 -0.3
30 AT1G07460 Concanavalin A-like lectin family protein -0.62 0.31 -0.32
31 AT2G33240 myosin XI D MYOSIN XI D, myosin XI D -0.62 0.33 -0.33
32 AT1G47380 Protein phosphatase 2C family protein -0.62 0.32 -0.33
33 AT5G15490 UDP-glucose 6-dehydrogenase family protein UDP-glucose dehydrogenase 3 -0.62 0.31 -0.32
34 AT2G47970 Nuclear pore localisation protein NPL4 -0.62 0.33 -0.31
35 AT4G37780 myb domain protein 87 ATMYB87, myb domain protein 87 -0.62 0.3 -0.32
36 AT1G66960 Terpenoid cyclases family protein LUP5 0.61 0.32 -0.29
37 AT3G44440 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).
-0.61 0.3 -0.31
38 AT3G24480 Leucine-rich repeat (LRR) family protein 0.61 0.32 -0.3
39 AT3G54320 Integrase-type DNA-binding superfamily protein ACTIVATOR OF SPO(MIN)::LUC1,
ATWRI1, WRINKLED, WRINKLED 1
0.61 0.33 -0.31
40 AT1G49160 Protein kinase superfamily protein WNK7 0.61 0.33 -0.33
41 AT5G39440 SNF1-related protein kinase 1.3 SNF1-related protein kinase 1.3 0.61 0.32 -0.32
42 AT5G51260 HAD superfamily, subfamily IIIB acid phosphatase -0.61 0.32 -0.32
43 AT2G01410 NHL domain-containing protein -0.6 0.3 -0.34
44 AT4G19940 F-box and associated interaction domains-containing protein 0.6 0.34 -0.3
45 AT4G17710 homeodomain GLABROUS 4 homeodomain GLABROUS 4 0.6 0.35 -0.32
46 AT2G25360 RING/U-box superfamily protein 0.6 0.31 -0.3
47 AT5G25880 NADP-malic enzyme 3 Arabidopsis thaliana NADP-malic
enzyme 3, NADP-malic enzyme 3
-0.6 0.33 -0.32
48 AT4G35510 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G17540.3); Has 182 Blast hits
to 179 proteins in 73 species: Archae - 0; Bacteria - 87;
Metazoa - 17; Fungi - 9; Plants - 50; Viruses - 0; Other
Eukaryotes - 19 (source: NCBI BLink).
-0.6 0.32 -0.32
49 AT2G22520 unknown protein; Has 186 Blast hits to 37 proteins in 16
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4;
Plants - 17; Viruses - 0; Other Eukaryotes - 165 (source:
NCBI BLink).
-0.6 0.33 -0.31
50 AT5G12260 BEST Arabidopsis thaliana protein match is:
glycosyltransferase family protein 2 (TAIR:AT5G60700.1);
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).
-0.6 0.31 -0.32
51 AT3G22990 ARM repeat superfamily protein LEAF AND FLOWER RELATED -0.6 0.31 -0.31
52 AT4G14900 FRIGIDA-like protein -0.59 0.32 -0.31
53 AT1G64410 transposable element gene 0.59 0.3 -0.32
54 AT1G34140 poly(A) binding protein 1 poly(A) binding protein 1 0.59 0.33 -0.3
55 AT1G26610 C2H2-like zinc finger protein 0.59 0.29 -0.33
56 AT2G07728 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: cultured cell;
Has 1 Blast hits to 1 proteins in 1 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses -
0; Other Eukaryotes - 0 (source: NCBI BLink).
0.59 0.32 -0.32
57 AT5G17190 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
intracellular protein transport; LOCATED IN: endomembrane
system, integral to membrane, endoplasmic reticulum;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: B-cell
receptor-associated 31-like (InterPro:IPR008417); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G03160.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).
-0.59 0.34 -0.3
58 AT1G48270 G-protein-coupled receptor 1 G-protein-coupled receptor 1 -0.58 0.32 -0.32
59 AT3G44270 transposable element gene -0.58 0.3 -0.3
60 AT4G25540 homolog of DNA mismatch repair protein MSH3 ATMSH3, homolog of DNA mismatch
repair protein MSH3
0.58 0.31 -0.31
61 AT4G07380 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).
0.58 0.31 -0.28
62 AT4G11490 cysteine-rich RLK (RECEPTOR-like protein kinase) 33 cysteine-rich RLK (RECEPTOR-like
protein kinase) 33
0.58 0.31 -0.34
63 AT5G37780 calmodulin 1 ACAM-1, calmodulin 1, TOUCH 1 -0.58 0.3 -0.31
64 AT4G14180 putative recombination initiation defect 1 putative recombination initiation
defect 1, putative recombination
initiation defect 1
0.58 0.33 -0.29
65 AT2G18350 homeobox protein 24 homeobox protein 24, homeobox
protein 24, ZINC FINGER
HOMEODOMAIN 6
-0.58 0.32 -0.32
66 AT1G78300 general regulatory factor 2 14-3-3 PROTEIN G-BOX FACTOR14
OMEGA, GF14 OMEGA, general
regulatory factor 2
-0.58 0.31 -0.3
67 AT2G21060 glycine-rich protein 2B COLD SHOCK DOMAIN PROTEIN 4,
glycine-rich protein 2B,
glycine-rich protein 2B
-0.58 0.31 -0.3
68 AT1G75730 unknown protein; Has 327 Blast hits to 272 proteins in 89
species: Archae - 0; Bacteria - 129; Metazoa - 68; Fungi -
14; Plants - 20; Viruses - 0; Other Eukaryotes - 96
(source: NCBI BLink).
0.58 0.31 -0.31
69 AT1G31000 F-box and associated interaction domains-containing protein 0.58 0.33 -0.33
70 AT4G10750 Phosphoenolpyruvate carboxylase family protein -0.58 0.32 -0.32
71 AT5G05950 maternal effect embryo arrest 60 maternal effect embryo arrest 60 -0.58 0.31 -0.34
72 AT2G26450 Plant invertase/pectin methylesterase inhibitor superfamily 0.57 0.33 -0.33
73 AT3G17280 F-box and associated interaction domains-containing protein 0.57 0.33 -0.31
74 AT3G11380 Pentatricopeptide repeat (PPR) superfamily protein 0.57 0.32 -0.31
75 AT5G24440 CTC-interacting domain 13 CTC-interacting domain 13 0.57 0.29 -0.34
76 AT5G18910 Protein kinase superfamily protein 0.57 0.35 -0.31
77 AT3G11870 Endoribonuclease/protein kinase IRE1-like 0.57 0.32 -0.32
78 AT5G08090 unknown protein; Has 13 Blast hits to 13 proteins in 8
species: Archae - 0; Bacteria - 4; Metazoa - 6; Fungi - 2;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).
0.57 0.32 -0.33
79 AT5G01380 Homeodomain-like superfamily protein -0.57 0.29 -0.3
80 AT5G01480 Cysteine/Histidine-rich C1 domain family protein 0.57 0.3 -0.33
81 ATMG00720 hypothetical protein ORF107D 0.57 0.32 -0.32
82 AT4G05000 Vacuolar protein sorting-associated protein VPS28 family
protein
vacuolar protein
sorting-associated protein 28
homolog 1, VPS28-2
-0.57 0.31 -0.33
83 AT5G11280 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G80200.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).
-0.57 0.33 -0.34
84 AT3G44830 Lecithin:cholesterol acyltransferase family protein -0.57 0.33 -0.32
85 AT3G60600 vesicle associated protein (AT)VAP, vesicle associated
protein, VAP27,
VAMP/SYNAPTOBREVIN-ASSOCIATED
PROTEIN 27-1
-0.57 0.31 -0.31
86 AT1G63020 nuclear RNA polymerase D1A NRPD1, nuclear RNA polymerase D1A,
NUCLEAR RNA POLYMERASE D 1A, SDE4,
SILENCING MOVEMENT DEFICIENT 2
-0.56 0.31 -0.33
87 AT5G63260 Zinc finger C-x8-C-x5-C-x3-H type family protein -0.56 0.32 -0.33
88 AT3G14430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to oxidative stress; LOCATED IN:
mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 16 Blast hits to 16 proteins
in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).
-0.55 0.34 -0.34
89 AT1G51160 SNARE-like superfamily protein -0.55 0.31 -0.31
90 AT1G47250 20S proteasome alpha subunit F2 20S proteasome alpha subunit F2 -0.55 0.33 -0.31
91 AT5G51270 U-box domain-containing protein kinase family protein -0.55 0.32 -0.32
92 AT5G35430 Tetratricopeptide repeat (TPR)-like superfamily protein -0.55 0.32 -0.33
93 AT5G26270 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).
-0.55 0.33 -0.33