AT5G23120 : HIGH CHLOROPHYLL FLUORESCENCE 136
Query Information
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AGICode AT5G23120
Description photosystem II stability/assembly factor, chloroplast (HCF136)
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G23120 photosystem II stability/assembly factor, chloroplast
(HCF136)		 HIGH CHLOROPHYLL FLUORESCENCE 136 1 0.34 -0.33
2 AT5G59250 Major facilitator superfamily protein 0.93 0.32 -0.32
3 AT5G42070 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN:
21 plant structures; EXPRESSED DURING: 13 growth stages;
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 0.9 0.31 -0.33
4 AT4G37930 serine transhydroxymethyltransferase 1 serine
transhydroxymethyltransferase 1,
SERINE HYDROXYMETHYLTRANSFERASE 1,
SERINE
TRANSHYDROXYMETHYLTRANSFERASE		 0.89 0.29 -0.31
5 AT1G51110 Plastid-lipid associated protein PAP / fibrillin family
protein		 0.89 0.31 -0.32
6 AT1G74880 NAD(P)H:plastoquinone dehydrogenase complex subunit O NAD(P)H:plastoquinone
dehydrogenase complex subunit O,
NADH dehydrogenase-like complex )		 0.87 0.31 -0.32
7 AT1G18060 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 74 Blast hits to 74
proteins in 29 species: Archae - 0; Bacteria - 19; Metazoa
- 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes
- 6 (source: NCBI BLink).		 0.87 0.34 -0.29
8 AT3G56650 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP
family protein		 0.87 0.31 -0.3
9 AT2G04039 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF2996
(InterPro:IPR021374); Has 159 Blast hits to 159 proteins in
52 species: Archae - 0; Bacteria - 76; Metazoa - 0; Fungi -
0; Plants - 38; Viruses - 0; Other Eukaryotes - 45 (source:
NCBI BLink).		 0.87 0.34 -0.3
10 AT2G39470 PsbP-like protein 2 Photosynthetic NDH subcomplex L
1, PsbP-like protein 2		 0.87 0.31 -0.31
11 AT1G70760 inorganic carbon transport protein-related CHLORORESPIRATORY REDUCTION 23,
NADH dehydrogenase-like complex L		 0.87 0.32 -0.32
12 AT5G35630 glutamine synthetase 2 GLUTAMINE SYNTHETASE LIKE 1,
GLUTAMINE SYNTHETASE 2, glutamine
synthetase 2		 0.86 0.31 -0.32
13 AT3G26060 Thioredoxin superfamily protein ATPRX Q, peroxiredoxin Q 0.86 0.32 -0.31
14 AT5G54290 cytochrome c biogenesis protein family CcdA 0.86 0.35 -0.34
15 AT3G43540 Protein of unknown function (DUF1350) 0.86 0.31 -0.29
16 AT4G30950 fatty acid desaturase 6 fatty acid desaturase 6, FATTY
ACID DESATURASE C, STEAROYL
DESATURASE DEFICIENCY 4		 0.86 0.31 -0.31
17 AT1G20810 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.86 0.32 -0.32
18 AT2G44920 Tetratricopeptide repeat (TPR)-like superfamily protein 0.86 0.32 -0.33
19 AT1G32080 membrane protein, putative AtLrgB, LrgB 0.86 0.33 -0.33
20 AT5G09660 peroxisomal NAD-malate dehydrogenase 2 peroxisomal NAD-malate
dehydrogenase 2		 0.85 0.3 -0.32
21 AT5G19220 ADP glucose pyrophosphorylase large subunit 1 ADP GLUCOSE PYROPHOSPHORYLASE 2,
ADP glucose pyrophosphorylase
large subunit 1		 0.85 0.31 -0.32
22 AT3G63140 chloroplast stem-loop binding protein of 41 kDa chloroplast stem-loop binding
protein of 41 kDa		 0.85 0.33 -0.32
23 AT1G51110 Plastid-lipid associated protein PAP / fibrillin family
protein		 0.84 0.31 -0.33
24 AT4G33470 histone deacetylase 14 ATHDA14, histone deacetylase 14 0.84 0.31 -0.33
25 AT5G14740 carbonic anhydrase 2 BETA CARBONIC ANHYDRASE 2,
CARBONIC ANHYDRASE 18, carbonic
anhydrase 2		 0.84 0.31 -0.31
26 AT4G35250 NAD(P)-binding Rossmann-fold superfamily protein 0.83 0.31 -0.34
27 AT4G01150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
thylakoid, chloroplast thylakoid membrane, chloroplast,
plastoglobule, chloroplast envelope; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G38100.1); Has 323 Blast hits to 323 proteins in
59 species: Archae - 0; Bacteria - 107; Metazoa - 0; Fungi
- 0; Plants - 206; Viruses - 0; Other Eukaryotes - 10
(source: NCBI BLink).		 0.83 0.31 -0.33
28 AT3G48420 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.83 0.3 -0.34
29 AT2G21960 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G56180.1); Has 224 Blast hits to 222 proteins in
59 species: Archae - 0; Bacteria - 65; Metazoa - 0; Fungi -
0; Plants - 134; Viruses - 0; Other Eukaryotes - 25
(source: NCBI BLink).		 0.83 0.33 -0.32
30 AT2G21370 xylulose kinase-1 xylulose kinase-1, XYLULOSE KINASE
1		 0.83 0.31 -0.31
31 AT3G10060 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.83 0.31 -0.33
32 AT5G57960 GTP-binding protein, HflX 0.83 0.29 -0.32
33 AT5G08650 Small GTP-binding protein 0.83 0.3 -0.32
34 AT4G01800 Albino or Glassy Yellow 1 Albino or Glassy Yellow 1,
Arabidopsis thaliana chloroplast
SecA, SECA1		 0.83 0.31 -0.3
35 AT1G08550 non-photochemical quenching 1 ARABIDOPSIS VIOLAXANTHIN
DE-EPOXIDASE 1, non-photochemical
quenching 1		 0.82 0.32 -0.35
36 AT3G01500 carbonic anhydrase 1 BETA CARBONIC ANHYDRASE 1,
ARABIDOPSIS THALIANA SALICYLIC
ACID-BINDING PROTEIN 3, carbonic
anhydrase 1, SALICYLIC
ACID-BINDING PROTEIN 3		 0.82 0.31 -0.3
37 AT1G18730 NDH dependent flow 6 NDH dependent flow 6,
Photosynthetic NDH subcomplex B 4		 0.82 0.32 -0.31
38 AT5G61410 D-ribulose-5-phosphate-3-epimerase EMBRYO DEFECTIVE 2728,
D-ribulose-5-phosphate-3-epimerase		 0.82 0.32 -0.31
39 AT3G61080 Protein kinase superfamily protein 0.81 0.31 -0.31
40 AT1G16720 high chlorophyll fluorescence phenotype 173 high chlorophyll fluorescence
phenotype 173		 0.81 0.31 -0.32
41 AT2G36145 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast stroma,
chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED
DURING: 13 growth stages; Has 49 Blast hits to 49 proteins
in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.81 0.31 -0.33
42 AT5G13410 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.81 0.3 -0.32
43 AT2G35370 glycine decarboxylase complex H glycine decarboxylase complex H 0.81 0.31 -0.31
44 AT4G18740 Rho termination factor 0.81 0.32 -0.31
45 AT5G27560 Domain of unknown function (DUF1995) 0.81 0.31 -0.31
46 AT5G22620 phosphoglycerate/bisphosphoglycerate mutase family protein 0.81 0.3 -0.31
47 AT2G05620 proton gradient regulation 5 proton gradient regulation 5 0.8 0.31 -0.31
48 AT1G73060 Low PSII Accumulation 3 Low PSII Accumulation 3 0.8 0.31 -0.35
49 AT2G28800 63 kDa inner membrane family protein ALBINO 3 0.8 0.32 -0.33
50 AT5G39830 Trypsin family protein with PDZ domain DEG8, DEG PROTEASE 8 0.8 0.31 -0.33
51 AT3G63510 FMN-linked oxidoreductases superfamily protein 0.8 0.3 -0.31
52 AT3G10230 lycopene cyclase AtLCY, lycopene cyclase 0.79 0.31 -0.3
53 AT1G32520 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; Has 143 Blast hits to 142
proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa -
39; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes -
48 (source: NCBI BLink).		 0.79 0.31 -0.3
54 AT5G04360 limit dextrinase limit dextrinase, PULLULANASE 1,
limit dextrinase, PULLULANASE 1		 0.79 0.29 -0.3
55 AT4G31500 cytochrome P450, family 83, subfamily B, polypeptide 1 ALTERED TRYPTOPHAN REGULATION 4,
cytochrome P450, family 83,
subfamily B, polypeptide 1, RED
ELONGATED 1, RUNT 1, SUPERROOT 2		 -0.67 0.32 -0.31
56 AT1G21370 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF218 (InterPro:IPR003848); Has 160 Blast
hits to 160 proteins in 86 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 102; Plants - 44; Viruses - 0;
Other Eukaryotes - 14 (source: NCBI BLink).		 -0.63 0.34 -0.29
57 AT3G14395 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.58 0.3 -0.33
58 AT3G29970 B12D protein -0.58 0.32 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
59 C0253 Threonic acid-1,4-lactone D,L-Threonic acid-1,4-lactone - - 0.83 0.44 -0.45