AT5G13760 : -
Query Information
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AGICode AT5G13760
Description Plasma-membrane choline transporter family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G13760 Plasma-membrane choline transporter family protein 1 0.3 -0.33
2 AT5G27350 Major facilitator superfamily protein SFP1 0.83 0.33 -0.31
3 AT1G17340 Phosphoinositide phosphatase family protein 0.83 0.32 -0.33
4 AT3G10260 Reticulon family protein 0.82 0.31 -0.31
5 AT3G11230 Yippee family putative zinc-binding protein 0.82 0.33 -0.33
6 AT3G62010 unknown protein; LOCATED IN: cellular_component unknown;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15
growth stages; Has 553 Blast hits to 216 proteins in 93
species: Archae - 0; Bacteria - 124; Metazoa - 193; Fungi -
58; Plants - 108; Viruses - 0; Other Eukaryotes - 70
(source: NCBI BLink).		 0.82 0.34 -0.31
7 AT1G04970 lipid-binding serum glycoprotein family protein 0.81 0.32 -0.3
8 AT1G03530 nuclear assembly factor 1 ATNAF1, nuclear assembly factor 1 -0.8 0.32 -0.31
9 AT1G67560 PLAT/LH2 domain-containing lipoxygenase family protein Arabidopsis thaliana lipoxygenase
6, lipoxygenase 6		 0.8 0.32 -0.32
10 AT5G23810 amino acid permease 7 amino acid permease 7 0.8 0.33 -0.32
11 AT1G75990 PAM domain (PCI/PINT associated module) protein -0.8 0.32 -0.31
12 AT4G21790 tobamovirus multiplication 1 ATTOM1, tobamovirus multiplication
1		 0.8 0.33 -0.32
13 AT1G01490 Heavy metal transport/detoxification superfamily protein 0.8 0.32 -0.33
14 AT4G16770 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.79 0.33 -0.28
15 AT1G64200 vacuolar H+-ATPase subunit E isoform 3 vacuolar H+-ATPase subunit E
isoform 3		 0.79 0.31 -0.32
16 AT5G64370 beta-ureidopropionase beta-ureidopropionase, PYRIMIDINE
3		 0.78 0.31 -0.31
17 AT5G12200 pyrimidine 2 pyrimidine 2 0.78 0.31 -0.33
18 AT4G01897 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF952 (InterPro:IPR009297); Has 763 Blast
hits to 763 proteins in 180 species: Archae - 0; Bacteria -
351; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0;
Other Eukaryotes - 383 (source: NCBI BLink).		 0.78 0.31 -0.33
19 AT5G50350 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to oxidative stress; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 -0.78 0.31 -0.31
20 AT4G32420 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 -0.78 0.3 -0.29
21 AT3G59710 NAD(P)-binding Rossmann-fold superfamily protein 0.78 0.33 -0.32
22 AT1G19310 RING/U-box superfamily protein 0.77 0.32 -0.32
23 AT2G38050 3-oxo-5-alpha-steroid 4-dehydrogenase family protein ATDET2, DE-ETIOLATED 2, DWARF 6 0.77 0.3 -0.3
24 AT3G56360 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G05250.1); Has 45 Blast
hits to 45 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.76 0.31 -0.3
25 AT1G18040 cyclin-dependent kinase D1;3 CYCLIN-DEPENDENT KINASE D1;3,
CAK2AT, cyclin-dependent kinase
D1;3		 -0.76 0.31 -0.33
26 AT1G54680 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G27290.1); Has 200 Blast hits to 200 proteins in
57 species: Archae - 0; Bacteria - 59; Metazoa - 0; Fungi -
0; Plants - 127; Viruses - 0; Other Eukaryotes - 14
(source: NCBI BLink).		 0.76 0.32 -0.31
27 AT5G24420 6-phosphogluconolactonase 5 6-phosphogluconolactonase 5 0.76 0.32 -0.32
28 AT4G04610 APS reductase 1 APR, APS reductase 1, ATAPR1, PAPS
REDUCTASE HOMOLOG 19		 0.76 0.31 -0.31
29 AT4G22380 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein -0.76 0.33 -0.31
30 AT1G30220 inositol transporter 2 ARABIDOPSIS THALIANA INOSITOL
TRANSPORTER 2, inositol
transporter 2		 0.76 0.3 -0.34
31 AT1G12240 Glycosyl hydrolases family 32 protein ATBETAFRUCT4, VACUOLAR INVERTASE 0.76 0.31 -0.31
32 AT1G53560 Ribosomal protein L18ae family 0.76 0.33 -0.32
33 AT3G11880 Protein of unknown function DUF2359, transmembrane 0.75 0.31 -0.31
34 AT1G61065 Protein of unknown function (DUF1218) 0.75 0.32 -0.32
35 AT3G14920 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A
protein		 0.75 0.32 -0.29
36 AT4G37210 Tetratricopeptide repeat (TPR)-like superfamily protein -0.75 0.31 -0.3
37 AT4G01450 nodulin MtN21 /EamA-like transporter family protein 0.75 0.3 -0.31
38 AT2G36950 Heavy metal transport/detoxification superfamily protein 0.75 0.31 -0.3
39 AT1G58200 MSCS-like 3 MSCS-like 3 0.74 0.32 -0.31
40 AT5G08180 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein -0.74 0.31 -0.31
41 AT3G57000 nucleolar essential protein-related -0.74 0.32 -0.31
42 AT5G56740 histone acetyltransferase of the GNAT family 2 HAC07, HAC7, HAG02, histone
acetyltransferase of the GNAT
family 2		 -0.74 0.31 -0.32
43 AT4G36470 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.74 0.31 -0.32
44 AT5G47240 nudix hydrolase homolog 8 nudix hydrolase homolog 8, nudix
hydrolase homolog 8		 0.74 0.31 -0.31
45 AT5G65120 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G10110.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.74 0.33 -0.32
46 AT5G11240 transducin family protein / WD-40 repeat family protein -0.74 0.31 -0.3
47 AT1G66350 RGA-like 1 RGL, RGA-like 1 0.74 0.33 -0.32
48 AT5G07860 HXXXD-type acyl-transferase family protein 0.73 0.3 -0.3
49 AT1G04440 casein kinase like 13 casein kinase like 13 0.73 0.32 -0.31
50 AT1G75220 Major facilitator superfamily protein AtERDL6, ERD6-like 6 0.73 0.29 -0.31
51 AT5G64200 ortholog of human splicing factor SC35 ortholog of human splicing factor
SC35, ARABIDOPSIS THALIANA
ORTHOLOG OF HUMAN SPLICING FACTOR
SC35, ortholog of human splicing
factor SC35		 -0.73 0.33 -0.33
52 AT1G69370 chorismate mutase 3 cm-3, chorismate mutase 3 0.73 0.33 -0.31
53 AT2G41480 Peroxidase superfamily protein 0.73 0.31 -0.33
54 AT2G39810 ubiquitin-protein ligases HIGH EXPRESSION OF OSMOTICALLY
RESPONSIVE GENES 1		 -0.73 0.34 -0.3
55 AT5G16800 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.73 0.3 -0.31
56 AT1G80270 PENTATRICOPEPTIDE REPEAT 596 PENTATRICOPEPTIDE REPEAT 596 -0.73 0.31 -0.31
57 AT1G62200 Major facilitator superfamily protein AtPTR6, peptide transporter 6 0.73 0.32 -0.31
58 AT4G16130 arabinose kinase arabinose kinase, ATISA1, ISA1 0.73 0.32 -0.32
59 AT3G12860 NOP56-like pre RNA processing ribonucleoprotein -0.73 0.29 -0.32
60 AT4G10760 mRNAadenosine methylase EMBRYO DEFECTIVE 1706,
mRNAadenosine methylase		 -0.72 0.31 -0.36
61 AT4G35600 Protein kinase superfamily protein CAST AWAY, CONNEXIN 32, kinase 4 0.72 0.32 -0.31
62 AT3G02300 Regulator of chromosome condensation (RCC1) family protein 0.72 0.31 -0.32
63 AT4G11420 eukaryotic translation initiation factor 3A ATEIF3A-1, ATTIF3A1, eukaryotic
translation initiation factor 3A,
EIF3A-1, TIF3A1		 -0.72 0.31 -0.31
64 AT1G22380 UDP-glucosyl transferase 85A3 UDP-glucosyl transferase 85A3,
UDP-glucosyl transferase 85A3		 0.72 0.33 -0.29
65 AT4G35750 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 0.72 0.33 -0.3
66 AT3G23200 Uncharacterised protein family (UPF0497) 0.72 0.32 -0.32
67 AT4G31120 SHK1 binding protein 1 ATPRMT5, PROTEIN ARGININE
METHYLTRANSFERASE 5, SHK1 binding
protein 1		 -0.72 0.31 -0.33
68 AT5G56020 Got1/Sft2-like vescicle transport protein family 0.72 0.31 -0.31
69 AT1G44790 ChaC-like family protein 0.72 0.3 -0.32
70 AT2G41490 UDP-glcnac-adolichol phosphate glcnac-1-p-transferase UDP-glcnac-adolichol phosphate
glcnac-1-p-transferase		 0.72 0.3 -0.31
71 AT1G48790 associated molecule with the SH3 domain of STAM 1 associated molecule with the SH3
domain of STAM 1		 0.71 0.32 -0.31
72 AT3G53950 glyoxal oxidase-related protein 0.71 0.35 -0.33
73 AT1G14120 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.71 0.33 -0.32
74 AT2G32080 purin-rich alpha 1 purin-rich alpha 1 0.71 0.3 -0.32
75 AT1G63160 replication factor C 2 EMBRYO DEFECTIVE 2811, replication
factor C 2		 -0.71 0.3 -0.32
76 AT3G01850 Aldolase-type TIM barrel family protein 0.71 0.31 -0.32
77 AT3G17510 CBL-interacting protein kinase 1 CBL-interacting protein kinase 1,
SNF1-RELATED PROTEIN KINASE 3.16		 0.7 0.31 -0.31
78 AT5G16040 Regulator of chromosome condensation (RCC1) family protein -0.7 0.33 -0.3
79 AT5G19120 Eukaryotic aspartyl protease family protein 0.7 0.31 -0.33
80 AT1G26670 Vesicle transport v-SNARE family protein ATVTI12, VESICAL TRANSPORT V-SNARE
12, VTI1B		 0.7 0.32 -0.29
81 AT5G08350 GRAM domain-containing protein / ABA-responsive
protein-related		 0.7 0.32 -0.31
82 AT1G29760 Putative adipose-regulatory protein (Seipin) 0.7 0.32 -0.32
83 AT3G10530 Transducin/WD40 repeat-like superfamily protein -0.7 0.3 -0.31
84 AT1G13030 sphere organelles protein-related -0.7 0.35 -0.32
85 AT1G10490 Domain of unknown function (DUF1726) ;Putative ATPase
(DUF699)		 -0.7 0.31 -0.31
86 AT4G34950 Major facilitator superfamily protein -0.7 0.32 -0.32
87 AT4G36400 FAD-linked oxidases family protein D-2-hydroxyglutarate dehydrogenase 0.7 0.33 -0.31
88 AT4G25340 FK506 BINDING PROTEIN 53 ATFKBP53, FK506 BINDING PROTEIN 53 -0.7 0.3 -0.35
89 AT1G55090 carbon-nitrogen hydrolase family protein 0.7 0.32 -0.31
90 AT1G74560 NAP1-related protein 1 NAP1-related protein 1 -0.7 0.3 -0.31
91 AT5G67160 HXXXD-type acyl-transferase family protein ENHANCED PSEUDOMONAS SUSCEPTIBILTY
1		 0.7 0.3 -0.3
92 AT1G60440 pantothenate kinase 1 ATCOAA, pantothenate kinase 1,
pantothenate kinase 1		 0.7 0.32 -0.33
93 AT5G64240 metacaspase 3 metacaspase 3, metacaspase 1a,
metacaspase 3, metacaspase 1a		 0.7 0.32 -0.31
94 AT5G64900 precursor of peptide 1 ARABIDOPSIS THALIANA PEPTIDE 1,
PEPTIDE 1, precursor of peptide 1		 0.69 0.34 -0.31
95 AT4G02820 Pentatricopeptide repeat (PPR) superfamily protein -0.69 0.3 -0.32
96 AT3G15460 Ribosomal RNA processing Brix domain protein -0.69 0.33 -0.33
97 AT5G11850 Protein kinase superfamily protein 0.69 0.32 -0.33
98 AT3G61400 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.69 0.29 -0.31
99 AT3G05660 receptor like protein 33 receptor like protein 33, receptor
like protein 33		 -0.69 0.33 -0.29
100 AT5G45400 Replication factor-A protein 1-related ATRPA70C, RPA70C -0.69 0.32 -0.3
101 AT1G69950 transposable element gene -0.69 0.3 -0.33
102 AT4G16520 Ubiquitin-like superfamily protein autophagy 8f 0.69 0.31 -0.32
103 AT2G46030 ubiquitin-conjugating enzyme 6 ubiquitin-conjugating enzyme 6 0.69 0.33 -0.32
104 AT1G47330 CBS domain-containing protein with a domain of unknown
function (DUF21)		 0.69 0.32 -0.34
105 AT3G13150 Tetratricopeptide repeat (TPR)-like superfamily protein -0.69 0.33 -0.3
106 AT1G11240 CONTAINS InterPro DOMAIN/s: Nucleolar protein 12
(InterPro:IPR019186); Has 2484 Blast hits to 1934 proteins
in 262 species: Archae - 0; Bacteria - 90; Metazoa - 921;
Fungi - 378; Plants - 144; Viruses - 18; Other Eukaryotes -
933 (source: NCBI BLink).		 -0.69 0.32 -0.31
107 AT1G13330 Arabidopsis Hop2 homolog Arabidopsis Hop2 homolog -0.69 0.31 -0.29
108 AT1G71710 DNAse I-like superfamily protein -0.69 0.34 -0.31
109 AT4G26980 RNI-like superfamily protein 0.69 0.33 -0.32
110 AT2G26060 Transducin/WD40 repeat-like superfamily protein embryo defective 1345 -0.69 0.33 -0.3
111 AT1G01370 Histone superfamily protein CENTROMERIC HISTONE H3, HTR12 -0.68 0.34 -0.3
112 AT1G80750 Ribosomal protein L30/L7 family protein -0.68 0.33 -0.31
113 AT2G25970 KH domain-containing protein -0.68 0.32 -0.32
114 AT1G31430 Pentatricopeptide repeat (PPR-like) superfamily protein -0.68 0.29 -0.33
115 AT5G41600 VIRB2-interacting protein 3 VIRB2-interacting protein 3,
Reticulan like protein B4		 -0.68 0.3 -0.31
116 AT1G13160 ARM repeat superfamily protein -0.68 0.33 -0.31
117 AT4G25730 FtsJ-like methyltransferase family protein -0.68 0.3 -0.32
118 AT5G50310 Galactose oxidase/kelch repeat superfamily protein -0.68 0.29 -0.33
119 AT3G58660 Ribosomal protein L1p/L10e family -0.68 0.34 -0.32
120 AT4G05410 Transducin/WD40 repeat-like superfamily protein YAOZHE -0.68 0.32 -0.32
121 AT1G32860 Glycosyl hydrolase superfamily protein -0.68 0.3 -0.29
122 AT4G17180 O-Glycosyl hydrolases family 17 protein -0.67 0.33 -0.31
123 AT1G80530 Major facilitator superfamily protein -0.67 0.3 -0.32
124 AT5G22310 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G11590.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.67 0.32 -0.28
125 AT5G05210 Surfeit locus protein 6 -0.67 0.31 -0.33
126 AT1G69350 Tetratricopeptide repeat (TPR)-like superfamily protein -0.67 0.33 -0.31
127 AT1G30240 FUNCTIONS IN: binding; INVOLVED IN: biological_process
unknown; LOCATED IN: cellular_component unknown; EXPRESSED
IN: 21 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold
(InterPro:IPR016024); Has 165 Blast hits to 164 proteins in
73 species: Archae - 0; Bacteria - 0; Metazoa - 47; Fungi -
68; Plants - 46; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.67 0.31 -0.3
128 AT5G14050 Transducin/WD40 repeat-like superfamily protein -0.67 0.29 -0.33
129 AT3G05060 NOP56-like pre RNA processing ribonucleoprotein -0.67 0.32 -0.32
130 AT2G47990 transducin family protein / WD-40 repeat family protein EMBRYO SAC DEVELOPMENT ARREST 13,
EMBRYO SAC DEVELOPMENT ARREST 19,
SLOW WALKER1		 -0.67 0.3 -0.3
131 AT1G18330 Homeodomain-like superfamily protein EARLY-PHYTOCHROME-RESPONSIVE1,
REVEILLE 7		 -0.67 0.33 -0.3
132 AT1G51940 protein kinase family protein / peptidoglycan-binding LysM
domain-containing protein		 -0.67 0.3 -0.33
133 AT3G56090 ferritin 3 ferritin 3, ferritin 3 -0.67 0.31 -0.31
134 AT5G41190 CONTAINS InterPro DOMAIN/s: Nin one binding (NOB1)
Zn-ribbon like (InterPro:IPR014881), D-site 20S pre-rRNA
nuclease (InterPro:IPR017117); Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 -0.66 0.32 -0.33
135 AT5G19320 RAN GTPase activating protein 2 RAN GTPase activating protein 2 -0.66 0.32 -0.33
136 AT2G34570 PIN domain-like family protein maternal effect embryo arrest 21 -0.66 0.32 -0.32
137 AT1G15420 CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp12
(InterPro:IPR007148); Has 764 Blast hits to 656 proteins in
193 species: Archae - 0; Bacteria - 42; Metazoa - 237;
Fungi - 154; Plants - 85; Viruses - 23; Other Eukaryotes -
223 (source: NCBI BLink).		 -0.66 0.3 -0.3
138 AT3G26410 methyltransferases;nucleic acid binding AtTRM11, tRNA modification 11 -0.66 0.32 -0.32
139 AT4G29510 arginine methyltransferase 11 ARABIDOPSIS THALIANA ARGININE
METHYLTRANSFERASE 11, ARABIDOPSIS
THALIANA PROTEIN ARGININE
METHYLTRANSFERASE 1B, arginine
methyltransferase 11, PROTEIN
ARGININE METHYLTRANSFERASE 1B		 -0.66 0.32 -0.32
140 AT3G57130 Ankyrin repeat family protein / BTB/POZ domain-containing
protein		 BLADE ON PETIOLE 1 -0.65 0.33 -0.32
141 AT1G28060 Pre-mRNA-splicing factor 3 -0.65 0.3 -0.33
142 AT4G34910 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.65 0.32 -0.33
143 AT5G04280 RNA-binding (RRM/RBD/RNP motifs) family protein with
retrovirus zinc finger-like domain		 AtRZ-1c, RZ-1c -0.65 0.33 -0.31
144 AT4G38580 farnesylated protein 6 farnesylated protein 6,
farnesylated protein 6, HEAVY
METAL ASSOCIATED ISOPRENYLATED
PLANT PROTEIN 26		 -0.65 0.3 -0.3
145 AT1G54380 spliceosome protein-related -0.65 0.31 -0.33
146 AT4G28320 Glycosyl hydrolase superfamily protein AtMAN5, endo-beta-mannase 5 -0.65 0.33 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
147 C0120 Isocitric acid - Isocitrate TCA cycle variation V (plant),
TCA cycle variation III (eukaryotic),
glutamine biosynthesis III,
glyoxylate cycle 		0.8 0.46 -0.44 C0120