AT5G03520 : ARABIDOPSIS RAB HOMOLOG E1D
Query Information
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AGICode AT5G03520
Description RAB GTPase homolog 8C
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G03520 RAB GTPase homolog 8C ARABIDOPSIS RAB HOMOLOG E1D, RAB
GTPase homolog 8C, ATRABE1D, RAB
HOMOLOG E1D, RAB GTPase homolog 8C		 1 0.32 -0.31
2 AT1G69570 Dof-type zinc finger DNA-binding family protein 0.83 0.31 -0.35
3 AT4G17170 RAB GTPase homolog B1C AT-RAB2, ARABIDOPSIS RAB GTPASE
HOMOLOG B1B, ATRAB2A, ATRABB1C,
RAB GTPASE HOMOLOG B1B, RAB2A, RAB
GTPase homolog B1C		 0.81 0.32 -0.31
4 AT5G16760 Inositol 1,3,4-trisphosphate 5/6-kinase family protein Arabidopsis thaliana inositol
(1,3,4) P3 5/6-kinase 1, inositol
(1,3,4) P3 5/6-kinase 1		 0.79 0.31 -0.3
5 AT1G28200 FH interacting protein 1 FH interacting protein 1 0.79 0.3 -0.32
6 AT5G15490 UDP-glucose 6-dehydrogenase family protein UDP-glucose dehydrogenase 3 0.78 0.33 -0.32
7 AT5G52580 RabGAP/TBC domain-containing protein 0.77 0.33 -0.33
8 AT3G11850 Protein of unknown function, DUF593 0.77 0.31 -0.32
9 AT4G35860 GTP-binding 2 GTP-binding 2, ATRAB2C, ATRABB1B,
GTP-binding 2		 0.77 0.32 -0.31
10 AT1G43890 RAB GTPASE HOMOLOG B18 ARABIDOPSIS RAB GTPASE HOMOLOG C1,
ARABIDOPSIS RAB GTPASE HOMOLOG
B18, ARABIDOPSIS RAB GTPASE
HOMOLOG C1, RAB GTPASE HOMOLOG
B18, RAB GTPASE HOMOLOG 18-1, RAB
GTPASE HOMOLOG C1		 0.77 0.33 -0.32
11 AT1G78600 light-regulated zinc finger protein 1 B-box domain protein 22, DOUBLE
B-BOX 3, light-regulated zinc
finger protein 1, SALT TOLERANCE
HOMOLOG 3		 0.77 0.3 -0.3
12 AT1G16070 tubby like protein 8 tubby like protein 8, tubby like
protein 8		 -0.76 0.32 -0.32
13 AT3G15040 Protein of unknown function, DUF584 0.76 0.33 -0.3
14 AT1G34220 Regulator of Vps4 activity in the MVB pathway protein 0.76 0.33 -0.32
15 AT1G22750 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF1475 (InterPro:IPR009943);
Has 185 Blast hits to 155 proteins in 21 species: Archae -
0; Bacteria - 8; Metazoa - 3; Fungi - 0; Plants - 64;
Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink).		 0.75 0.32 -0.32
16 AT1G56450 20S proteasome beta subunit G1 20S proteasome beta subunit G1 0.74 0.31 -0.32
17 AT1G59710 Protein of unknown function (DUF569) 0.74 0.32 -0.31
18 AT1G66410 calmodulin 4 CALMODULIN 4, calmodulin 4 0.74 0.33 -0.3
19 AT5G58070 temperature-induced lipocalin TEMPERATURE-INDUCED LIPOCALIN,
temperature-induced lipocalin		 0.74 0.35 -0.32
20 AT2G27600 AAA-type ATPase family protein ATSKD1, SUPPRESSOR OF K+ TRANSPORT
GROWTH DEFECT1, VACUOLAR PROTEIN
SORTING 4		 0.74 0.33 -0.31
21 AT4G02080 secretion-associated RAS super family 2 ASAR1, secretion-associated RAS
super family 2, ATSARA1C,
secretion-associated RAS super
family 2		 0.73 0.34 -0.31
22 AT1G20330 sterol methyltransferase 2 COTYLEDON VASCULAR PATTERN 1,
FRILL1, sterol methyltransferase 2		 0.73 0.32 -0.32
23 AT1G64520 regulatory particle non-ATPase 12A regulatory particle non-ATPase 12A 0.73 0.32 -0.33
24 AT5G52200 phosphoprotein phosphatase inhibitors AtI-2, inhibitor-2 0.73 0.31 -0.31
25 AT3G24350 syntaxin of plants 32 ATSYP32, syntaxin of plants 32 0.73 0.3 -0.3
26 AT1G01230 ORMDL family protein 0.72 0.3 -0.29
27 AT5G06140 sorting nexin 1 ARABIDOPSIS THALIANA SORTING NEXIN
1, sorting nexin 1		 0.72 0.32 -0.32
28 AT4G17530 RAB GTPase homolog 1C RAB GTPase homolog 1C, ATRABD2C,
RAB1C, RAB GTPase homolog 1C		 0.72 0.32 -0.33
29 AT4G18530 Protein of unknown function (DUF707) 0.72 0.28 -0.31
30 AT5G22360 vesicle-associated membrane protein 714 vesicle-associated membrane
protein 714, VAMP714,
vesicle-associated membrane
protein 714		 0.71 0.32 -0.32
31 AT1G28250 unknown protein; Has 22 Blast hits to 22 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.71 0.29 -0.3
32 AT1G77610 EamA-like transporter family protein 0.71 0.31 -0.34
33 AT1G06040 B-box zinc finger family protein B-box domain protein 24, SALT
TOLERANCE		 0.71 0.3 -0.32
34 AT1G34780 APR-like 4 APR-like 4, APR-like 4 0.71 0.31 -0.33
35 AT5G41940 Ypt/Rab-GAP domain of gyp1p superfamily protein 0.7 0.32 -0.32
36 AT3G13520 arabinogalactan protein 12 arabinogalactan protein 12,
ATAGP12		 0.7 0.3 -0.33
37 AT4G14230 CBS domain-containing protein with a domain of unknown
function (DUF21)		 0.7 0.34 -0.31
38 AT4G11740 Ubiquitin-like superfamily protein SAY1 0.7 0.33 -0.34
39 AT3G20010 SNF2 domain-containing protein / helicase domain-containing
protein / zinc finger protein-related		 -0.7 0.31 -0.32
40 AT2G38670 phosphorylethanolamine cytidylyltransferase 1 phosphorylethanolamine
cytidylyltransferase 1		 0.7 0.32 -0.33
41 AT3G57070 Glutaredoxin family protein 0.69 0.35 -0.31
42 AT4G02610 Aldolase-type TIM barrel family protein -0.69 0.32 -0.3
43 AT3G56240 copper chaperone copper chaperone 0.69 0.31 -0.3
44 AT4G28770 Tetraspanin family protein 0.69 0.3 -0.31
45 AT1G69640 sphingoid base hydroxylase 1 sphingoid base hydroxylase 1 0.69 0.3 -0.33
46 AT3G20870 ZIP metal ion transporter family zinc transporter 29 0.69 0.33 -0.32
47 AT2G44940 Integrase-type DNA-binding superfamily protein 0.69 0.33 -0.31
48 AT1G02130 RAS 5 RAS 5, ARABIDOPSIS RAS 5,
ARABIDOPSIS THALIANA RESPONSIVE TO
ABSCISIC ACID 1B, ARABIDOPSIS
THALIANA RAB D2A, RAS 5, RAB D2A		 0.69 0.31 -0.31
49 AT4G20300 Protein of unknown function (DUF1639) 0.69 0.32 -0.31
50 AT1G35670 calcium-dependent protein kinase 2 calcium-dependent protein kinase
2, ATCPK11, calcium-dependent
protein kinase 2, CPK11		 0.68 0.31 -0.32
51 AT3G23930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: hypocotyl; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G13540.1); Has 10639 Blast hits to 7432 proteins
in 646 species: Archae - 82; Bacteria - 826; Metazoa -
5047; Fungi - 759; Plants - 314; Viruses - 86; Other
Eukaryotes - 3525 (source: NCBI BLink).		 -0.68 0.3 -0.32
52 AT1G13900 Purple acid phosphatases superfamily protein 0.68 0.31 -0.31
53 AT1G21710 8-oxoguanine-DNA glycosylase 1 ARABIDOPSIS 8-OXOGUANINE-DNA
GLYCOSYLASE 1, 8-oxoguanine-DNA
glycosylase 1		 -0.68 0.32 -0.31
54 AT5G05850 plant intracellular ras group-related LRR 1 plant intracellular ras
group-related LRR 1		 0.67 0.33 -0.33
55 AT5G60860 RAB GTPase homolog A1F RAB GTPase homolog A1F, RAB GTPase
homolog A1F		 0.67 0.3 -0.3
56 AT3G20570 early nodulin-like protein 9 AtENODL9, early nodulin-like
protein 9		 0.67 0.33 -0.31
57 AT3G46290 hercules receptor kinase 1 hercules receptor kinase 1 0.67 0.31 -0.31
58 AT1G69690 TCP family transcription factor AtTCP15, TEOSINTE
BRANCHED1/CYCLOIDEA/PCF 15		 0.67 0.32 -0.34
59 AT3G47430 peroxin 11B peroxin 11B -0.67 0.32 -0.31
60 AT5G20540 BREVIS RADIX-like 4 BREVIS RADIX-like 4, BRX-LIKE4,
BREVIS RADIX-like 4		 -0.67 0.32 -0.31
61 AT5G63870 serine/threonine phosphatase 7 ATPP7, serine/threonine
phosphatase 7		 0.67 0.31 -0.33
62 AT5G58180 Synaptobrevin family protein ATYKT62, YKT62 0.67 0.3 -0.32
63 AT5G20650 copper transporter 5 copper transporter 5 0.67 0.31 -0.33
64 AT3G49480 Protein with RNI-like/FBD-like domains 0.67 0.32 -0.29
65 AT1G70330 equilibrative nucleotide transporter 1 equilibrative nucleotide
transporter 1, equilibrative
nucleotide transporter 1		 0.66 0.31 -0.3
66 AT1G04050 homolog of SU(var)3-9 1 SET DOMAIN PROTEIN 13, homolog of
SU(var)3-9 1		 -0.66 0.32 -0.31
67 AT1G72180 Leucine-rich receptor-like protein kinase family protein 0.66 0.32 -0.31
68 AT5G11740 arabinogalactan protein 15 arabinogalactan protein 15,
ATAGP15		 0.66 0.31 -0.32
69 AT2G39010 plasma membrane intrinsic protein 2E PLASMA MEMBRANE INTRINSIC PROTEIN
2;6, plasma membrane intrinsic
protein 2E		 0.66 0.32 -0.31
70 AT3G19553 Amino acid permease family protein 0.66 0.32 -0.31
71 AT1G51170 Protein kinase superfamily protein -0.66 0.33 -0.32
72 AT1G70250 receptor serine/threonine kinase, putative -0.65 0.34 -0.3
73 AT5G40920 pseudogene, disease resistance protein (TIR-NBS-LRR class),
putative, domain signature TIR-NBS-LRR exists, suggestive
of a disease resistance protein.		 -0.65 0.34 -0.32
74 AT2G26470 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF159 (InterPro:IPR003738); Has 3646
Blast hits to 3636 proteins in 1001 species: Archae - 41;
Bacteria - 1922; Metazoa - 142; Fungi - 125; Plants - 44;
Viruses - 14; Other Eukaryotes - 1358 (source: NCBI BLink).		 -0.64 0.32 -0.32
75 AT5G18930 Adenosylmethionine decarboxylase family protein BUSHY AND DWARF 2, SAMDC4 -0.64 0.35 -0.32
76 AT4G39780 Integrase-type DNA-binding superfamily protein -0.64 0.32 -0.31
77 AT3G06340 DNAJ heat shock N-terminal domain-containing protein -0.63 0.32 -0.3
78 AT1G80790 XH/XS domain-containing protein factor of DNA methylation 5 -0.63 0.32 -0.33
79 AT1G03620 ELMO/CED-12 family protein -0.62 0.31 -0.31
80 AT3G20810 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 Jumonji C domain-containing
protein 30, jumonji domain
containing 5		 -0.61 0.31 -0.32
81 AT3G13065 STRUBBELIG-receptor family 4 STRUBBELIG-receptor family 4 -0.61 0.33 -0.32
82 AT2G44830 Protein kinase superfamily protein -0.61 0.31 -0.31
83 AT1G26260 cryptochrome-interacting basic-helix-loop-helix 5 cryptochrome-interacting
basic-helix-loop-helix 5		 -0.61 0.31 -0.33
84 AT5G65820 Pentatricopeptide repeat (PPR) superfamily protein -0.61 0.3 -0.31
85 AT4G37790 Homeobox-leucine zipper protein family HAT22 -0.61 0.3 -0.33
86 AT2G32440 ent-kaurenoic acid hydroxylase 2 ARABIDOPSIS ENT-KAURENOIC ACID
HYDROXYLASE 2, CYP88A4,
ent-kaurenoic acid hydroxylase 2		 -0.6 0.32 -0.32
87 AT1G10210 mitogen-activated protein kinase 1 mitogen-activated protein kinase
1, mitogen-activated protein
kinase 1		 -0.59 0.34 -0.32
88 AT4G35550 WUSCHEL related homeobox 13 ATWOX13, HB-4, WUSCHEL related
homeobox 13		 -0.59 0.3 -0.32
89 AT1G37150 holocarboxylase synthetase 2 holocarboxylase synthetase 2 -0.59 0.31 -0.31
90 AT4G17585 Aluminium activated malate transporter family protein -0.59 0.3 -0.34
91 AT4G38210 expansin A20 ATEXP20, expansin A20, ATHEXP
ALPHA 1.23, EXPANSIN 20, expansin
A20		 -0.59 0.33 -0.33
92 AT3G15390 silencing defective 5 silencing defective 5 -0.59 0.32 -0.3
93 AT5G01660 CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch,
beta-propeller (InterPro:IPR011043), Kelch repeat type 1
(InterPro:IPR006652), Development/cell death domain
(InterPro:IPR013989), Kelch related (InterPro:IPR013089),
Kelch-type beta propeller (InterPro:IPR015915); BEST
Arabidopsis thaliana protein match is: DCD (Development and
Cell Death) domain protein (TAIR:AT3G11000.1); Has 16133
Blast hits to 7053 proteins in 482 species: Archae - 40;
Bacteria - 1227; Metazoa - 10756; Fungi - 311; Plants -
1896; Viruses - 673; Other Eukaryotes - 1230 (source: NCBI
BLink).		 -0.58 0.32 -0.31
94 AT2G01670 nudix hydrolase homolog 17 nudix hydrolase homolog 17, nudix
hydrolase homolog 17		 -0.58 0.32 -0.32
95 AT2G03580 F-box family protein-related -0.57 0.32 -0.3
96 AT2G23740 nucleic acid binding;sequence-specific DNA binding
transcription factors;zinc ion binding		 -0.57 0.31 -0.31
97 AT2G22390 pseudogene, putative GTP-binding protein, similar to
GTP-binding protein GI:303738 from (Pisum sativum); blastp
match of 75% identity and 3.6e-56 P-value to
GP|303738|dbj|BAA02110.1||D12542 GTP-binding protein {Pisum
sativum}		 ATRABA4E, RAB GTPase homolog A4E -0.57 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
98 C0188 Nicotine (-)-Nicotine Nicotine - -0.7 0.45 -0.44 C0188