AT3G56270 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT3G56270
Description Plant protein of unknown function (DUF827)
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G56270 Plant protein of unknown function (DUF827) 1 0.34 -0.34
2 AT2G34840 Coatomer epsilon subunit 0.75 0.32 -0.31
3 AT3G10200 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.72 0.28 -0.31
4 AT2G04070 MATE efflux family protein -0.71 0.32 -0.31
5 AT5G24610 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G49550.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.7 0.33 -0.32
6 AT3G29380 Cyclin-like family protein plant-specific TFIIB-related
protein 2		 0.7 0.3 -0.36
7 AT5G09420 translocon at the outer membrane of chloroplasts 64-V AtmtOM64, translocon at the outer
membrane of chloroplasts 64-V,
ARABIDOPSIS THALIANA TRANSLOCON AT
THE OUTER MEMBRANE OF CHLOROPLASTS
64-V, outer membrane 64,
translocon at the outer membrane
of chloroplasts 64-V		 -0.68 0.3 -0.32
8 AT4G36880 cysteine proteinase1 cysteine proteinase1 -0.67 0.34 -0.32
9 AT3G06960 pigment defective 320 PIGMENT DEFECTIVE 320,
TRIGALACTOSYLDIACYLGLYCEROL 4		 0.67 0.31 -0.32
10 AT4G21650 Subtilase family protein 0.67 0.3 -0.33
11 AT2G27610 Tetratricopeptide repeat (TPR)-like superfamily protein -0.66 0.29 -0.31
12 AT1G69800 Cystathionine beta-synthase (CBS) protein 0.66 0.32 -0.31
13 AT2G41730 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G24640.1); Has 25 Blast hits
to 25 proteins in 5 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.65 0.3 -0.31
14 AT3G01570 Oleosin family protein 0.65 0.3 -0.31
15 AT1G68650 Uncharacterized protein family (UPF0016) -0.65 0.3 -0.32
16 ATMG00690 hypothetical protein ORF240A -0.65 0.32 -0.31
17 AT4G28240 Wound-responsive family protein 0.64 0.32 -0.32
18 AT1G06560 NOL1/NOP2/sun family protein -0.64 0.33 -0.32
19 AT1G16740 Ribosomal protein L20 -0.64 0.31 -0.32
20 AT4G05370 BCS1 AAA-type ATPase -0.64 0.31 -0.31
21 AT3G49320 Metal-dependent protein hydrolase -0.64 0.34 -0.32
22 AT2G35950 embryo sac development arrest 12 embryo sac development arrest 12 0.64 0.31 -0.32
23 AT1G13260 related to ABI3/VP1 1 ETHYLENE RESPONSE DNA BINDING
FACTOR 4, related to ABI3/VP1 1		 -0.63 0.31 -0.32
24 AT3G07770 HEAT SHOCK PROTEIN 89.1 HEAT SHOCK PROTEIN 90-6, HEAT
SHOCK PROTEIN 90.6, HEAT SHOCK
PROTEIN 89.1		 -0.63 0.33 -0.31
25 AT1G60995 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s:
Membralin (InterPro:IPR019144); Has 172 Blast hits to 170
proteins in 70 species: Archae - 0; Bacteria - 0; Metazoa -
110; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes
- 24 (source: NCBI BLink).		 -0.63 0.3 -0.33
26 AT2G42560 late embryogenesis abundant domain-containing protein / LEA
domain-containing protein		 0.63 0.31 -0.3
27 AT3G46580 methyl-CPG-binding domain protein 5 ATMBD5, METHYL-CPG-BINDING DOMAIN
PROTEIN 05, methyl-CPG-binding
domain protein 5		 0.62 0.32 -0.31
28 AT5G45690 Protein of unknown function (DUF1264) 0.62 0.31 -0.31
29 AT5G14510 ARM repeat superfamily protein 0.62 0.31 -0.32
30 AT2G29380 highly ABA-induced PP2C gene 3 highly ABA-induced PP2C gene 3 0.62 0.31 -0.31
31 AT1G61640 Protein kinase superfamily protein -0.62 0.32 -0.32
32 AT2G29580 CCCH-type zinc fingerfamily protein with RNA-binding domain MOS4-associated complex subunit 5B 0.62 0.31 -0.33
33 AT1G48470 glutamine synthetase 1;5 glutamine synthetase 1;5 0.61 0.33 -0.32
34 AT1G63600 Receptor-like protein kinase-related family protein 0.61 0.31 -0.33
35 AT2G42480 TRAF-like family protein 0.61 0.31 -0.31
36 AT5G42060 DEK, chromatin associated protein -0.61 0.29 -0.31
37 AT4G07540 transposable element gene 0.61 0.32 -0.34
38 AT1G61370 S-locus lectin protein kinase family protein -0.61 0.33 -0.32
39 AT4G01026 PYR1-like 7 PYR1-like 7, regulatory components
of ABA receptor 2		 0.61 0.36 -0.32
40 AT1G06110 SKP1/ASK-interacting protein 16 SKP1/ASK-interacting protein 16 0.61 0.31 -0.32
41 AT4G19500 nucleoside-triphosphatases;transmembrane
receptors;nucleotide binding;ATP binding		 0.6 0.32 -0.31
42 AT4G05440 temperature sensing protein-related embryo sac development arrest 35 -0.6 0.3 -0.31
43 AT5G17270 Protein prenylyltransferase superfamily protein -0.6 0.32 -0.31
44 AT4G38900 Basic-leucine zipper (bZIP) transcription factor family
protein		 0.6 0.3 -0.32
45 AT5G07250 RHOMBOID-like protein 3 RHOMBOID-like protein 3,
RHOMBOID-like protein 3		 0.6 0.32 -0.34
46 AT1G16980 trehalose-phosphatase/synthase 2 trehalose-phosphatase/synthase 2,
TREHALOSE -6-PHOSPHATASE SYNTHASE
S2, trehalose-phosphatase/synthase
2		 0.6 0.32 -0.33
47 AT3G22490 Seed maturation protein 0.6 0.33 -0.31
48 AT4G37050 PATATIN-like protein 4 phospholipase A IVC, PLA V,
patatin-related phospholipase III
beta, PATATIN-like protein 4		 0.6 0.32 -0.34
49 AT1G27770 autoinhibited Ca2+-ATPase 1 autoinhibited Ca2+-ATPase 1,
PLASTID ENVELOPE ATPASE 1		 -0.6 0.31 -0.32
50 AT5G30490 CONTAINS InterPro DOMAIN/s: Craniofacial development
protein 1/Bucentaur (InterPro:IPR011421); Has 333 Blast
hits to 324 proteins in 149 species: Archae - 0; Bacteria -
18; Metazoa - 117; Fungi - 96; Plants - 49; Viruses - 0;
Other Eukaryotes - 53 (source: NCBI BLink).		 -0.6 0.29 -0.31
51 AT2G15042 Leucine-rich repeat (LRR) family protein 0.59 0.3 -0.32
52 AT1G56345 Pseudouridine synthase family protein -0.59 0.35 -0.31
53 AT5G45140 nuclear RNA polymerase C2 nuclear RNA polymerase C2 -0.59 0.32 -0.3
54 AT4G09480 transposable element gene 0.59 0.33 -0.32
55 AT1G41797 transposable element gene 0.59 0.32 -0.3
56 AT3G02390 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast.		 -0.58 0.32 -0.3
57 AT4G36700 RmlC-like cupins superfamily protein 0.58 0.32 -0.31
58 AT2G06210 binding EARLY FLOWERING 8, VERNALIZATION
INDEPENDENCE 6		 -0.58 0.33 -0.3
59 AT3G26980 membrane-anchored ubiquitin-fold protein 4 precursor membrane-anchored ubiquitin-fold
protein 4 precursor		 -0.58 0.33 -0.3
60 AT5G08130 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 BIM1 0.57 0.28 -0.3
61 AT3G06433 pseudogene of nodulin MtN3 family protein 0.57 0.3 -0.33
62 AT3G25600 Calcium-binding EF-hand family protein -0.57 0.34 -0.33
63 AT2G01980 sodium proton exchanger, putative (NHX7) (SOS1) ARABIDOPSIS NA+/H+ ANTIPORTER 7,
ARABIDOPSIS SALT OVERLY SENSITIVE
1, SALT OVERLY SENSITIVE 1		 -0.57 0.33 -0.32
64 AT4G22800 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.57 0.31 -0.3
65 AT2G03770 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.57 0.3 -0.31
66 AT1G11940 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 0.57 0.31 -0.32
67 AT2G35580 Serine protease inhibitor (SERPIN) family protein 0.57 0.29 -0.31
68 AT4G13810 receptor like protein 47 receptor like protein 47, receptor
like protein 47		 0.57 0.3 -0.35
69 AT2G20150 unknown protein; Has 5 Blast hits to 5 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.57 0.31 -0.31
70 AT3G09405 Pectinacetylesterase family protein -0.56 0.32 -0.33
71 AT5G19280 kinase associated protein phosphatase kinase associated protein
phosphatase, ROOT ATTENUATED
GROWTH 1		 -0.56 0.29 -0.33
72 AT3G24040 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 0.56 0.31 -0.31
73 AT1G71450 Integrase-type DNA-binding superfamily protein -0.56 0.32 -0.31
74 AT2G04050 MATE efflux family protein -0.56 0.32 -0.33
75 AT1G11340 S-locus lectin protein kinase family protein -0.56 0.34 -0.33
76 AT1G67500 recovery protein 3 recovery protein 3, recovery
protein 3		 0.55 0.34 -0.3
77 AT2G05950 transposable element gene 0.55 0.32 -0.29
78 AT1G33500 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.55 0.31 -0.32
79 AT5G47160 YDG/SRA domain-containing protein 0.55 0.32 -0.32
80 AT1G13410 Tetratricopeptide repeat (TPR)-like superfamily protein -0.54 0.32 -0.31
81 AT3G01700 arabinogalactan protein 11 arabinogalactan protein 11,
ARABINOGALACTAN PROTEIN 11		 -0.54 0.31 -0.31
82 AT5G16300 Vps51/Vps67 family (components of vesicular transport)
protein		 -0.54 0.32 -0.33
83 AT3G42710 transposable element gene -0.54 0.32 -0.3
84 AT5G02570 Histone superfamily protein -0.54 0.32 -0.32
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
85 C0234 Sinapoyl glucose 1-O-Sinapoyl-β-D-glucose 1-O-Sinapoyl-β-D-glucose sinapate ester biosynthesis 0.79 0.45 -0.43 C0234
86 C0030 3-Methylsulfinyl-n-propylglucosinolate - 3-Methylsulfinylpropyl-glucosinolate glucosinolate biosynthesis from homomethionine 0.78 0.42 -0.48 C0030
87 C0261 UDP-glucose - UDP-D-glucose quercetin glucoside biosynthesis (Arabidopsis),
abscisic acid glucose ester biosynthesis,
anthocyanin biosynthesis (delphinidin 3-O-glucoside),
UDP-glucose biosynthesis (from sucrose),
2,4,6-trinitrotoluene degradation,
galactose degradation I (Leloir pathway),
cytokinins-O-glucoside biosynthesis,
trehalose biosynthesis I,
dolichyl-diphosphooligosaccharide biosynthesis,
phenolic malonylglucosides biosynthesis,
callose biosynthesis,
superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside),
glucosinolate biosynthesis from hexahomomethionine,
coniferin metabolism,
glucosinolate biosynthesis from phenylalanine,
xyloglucan biosynthesis,
glucosinolate biosynthesis from pentahomomethionine,
anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside),
glucosinolate biosynthesis from dihomomethionine,
cellulose biosynthesis,
sinapate ester biosynthesis,
superpathway of IAA conjugate biosynthesis,
salicylate glucosides biosynthesis IV,
sucrose biosynthesis I,
glucosinolate biosynthesis from trihomomethionine,
tetrahydrofolate biosynthesis II,
sucrose degradation III,
UDP-D-xylose and UDP-D-glucuronate biosynthesis,
coumarin biosynthesis (via 2-coumarate),
superpathway of sucrose and starch metabolism I (non-photosynthetic tissue),
monolignol glucosides biosynthesis,
glucosinolate biosynthesis from homomethionine,
kaempferol glucoside biosynthesis (Arabidopsis),
salicylate glucosides biosynthesis III,
cytokinins 7-N-glucoside biosynthesis,
galactose degradation III,
cytokinins 9-N-glucoside biosynthesis,
glucosinolate biosynthesis from tryptophan,
UDP-galactose biosynthesis,
salicylate glucosides biosynthesis II,
stachyose degradation,
superpathway of sucrose and starch metabolism II (photosynthetic tissue),
UDP-glucose biosynthesis (from glucose 6-phosphate),
sphingolipid biosynthesis (plants),
glucosinolate biosynthesis from tetrahomomethionine,
galactose degradation II,
UDP-L-rhamnose biosynthesis 		0.78 0.48 -0.41 C0261
88 C0056 AMP - AMP PRPP biosynthesis I,
fatty acid biosynthesis (plant mitochondria),
adenine and adenosine salvage VI,
biotin-carboxyl carrier protein assembly,
molybdenum cofactor biosynthesis II (eukaryotes),
gluconeogenesis I,
adenine and adenosine salvage II,
asparagine biosynthesis I,
L-glutamine biosynthesis II (tRNA-dependent),
trans-cinnamoyl-CoA biosynthesis,
IAA degradation V,
ethanol degradation II (cytosol),
arginine biosynthesis I,
IAA degradation IV,
fatty acid activation,
selenate reduction,
IAA biosynthesis VII,
4-hydroxybenzoate biosynthesis V,
tetrapyrrole biosynthesis I,
flavonoid biosynthesis,
indole-3-acetyl-amino acid biosynthesis,
glutamine biosynthesis III,
ethanol degradation IV (peroxisomal),
glycolysis I,
asparagine biosynthesis III (tRNA-dependent),
jasmonoyl-amino acid conjugates biosynthesis I,
molybdenum cofactor biosynthesis,
pyridine nucleotide cycling (plants),
scopoletin biosynthesis,
jasmonic acid biosynthesis,
adenosine nucleotides degradation I,
fatty acid beta-oxidation II (core pathway),
simple coumarins biosynthesis,
sulfate reduction II (assimilatory),
pantothenate biosynthesis,
sporopollenin precursor biosynthesis,
urea cycle,
thiamine biosynthesis II,
starch degradation II,
NAD biosynthesis I (from aspartate),
citrulline-nitric oxide cycle,
beta-alanine biosynthesis II,
arginine biosynthesis II (acetyl cycle),
suberin biosynthesis,
linoleate biosynthesis I (plants),
trans-zeatin biosynthesis,
tetrahydrofolate biosynthesis II,
purine nucleotides de novo biosynthesis II,
phenylpropanoid biosynthesis,
6-hydroxymethyl-dihydropterin diphosphate biosynthesis I,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
tRNA charging 		0.77 0.45 -0.44 C0056
89 C0186 NAD - NAD+ ammonia assimilation cycle II,
aspartate degradation II,
adenosine nucleotides degradation I,
plant sterol biosynthesis II,
UDP-D-xylose and UDP-D-glucuronate biosynthesis,
NAD biosynthesis I (from aspartate),
ethanol degradation IV (peroxisomal),
abscisic acid biosynthesis,
palmitate biosynthesis II (bacteria and plants),
zeaxanthin biosynthesis,
sucrose degradation to ethanol and lactate (anaerobic),
glutamate degradation IV,
stearate biosynthesis II (plants),
guanosine nucleotides degradation II,
glutamate degradation I,
mannitol degradation II,
glycerol-3-phosphate shuttle,
2-ketoglutarate dehydrogenase complex,
arginine degradation I (arginase pathway),
aerobic respiration (alternative oxidase pathway),
branched-chain alpha-keto acid dehydrogenase complex,
4-aminobutyrate degradation IV,
glycolysis I,
glycine cleavage complex,
lysine degradation II,
fatty acid beta-oxidation II (core pathway),
nitrate reduction II (assimilatory),
TCA cycle variation V (plant),
leucine degradation I,
thiamine biosynthesis II,
acetaldehyde biosynthesis I,
sorbitol degradation I,
glutamine biosynthesis III,
aerobic respiration (cytochrome c),
ethanol degradation I,
ascorbate biosynthesis I (L-galactose pathway),
glycolysis IV (plant cytosol),
benzoate biosynthesis II (CoA-independent, non-beta-oxidative),
siroheme biosynthesis,
TCA cycle variation III (eukaryotic),
isoleucine degradation I,
pyridine nucleotide cycling (plants),
tyrosine biosynthesis I,
gluconeogenesis I,
glycine betaine biosynthesis III (plants),
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis,
NAD/NADH phosphorylation and dephosphorylation,
guanosine nucleotides degradation I,
purine nucleotides de novo biosynthesis II,
acetyl-CoA biosynthesis (from pyruvate),
serine biosynthesis,
photorespiration,
histidine biosynthesis,
glyoxylate cycle,
jasmonic acid biosynthesis,
alanine degradation II (to D-lactate),
a ubiquinone + NADH + H+ -> a ubiquinol + NAD+,
putrescine degradation IV,
brassinosteroid biosynthesis III,
fatty acid elongation -- saturated,
pyruvate fermentation to ethanol II,
beta-alanine biosynthesis II,
4-hydroxybenzoate biosynthesis V,
plant sterol biosynthesis,
urate biosynthesis/inosine 5'-phosphate degradation,
phenylalanine degradation III,
glutamate biosynthesis IV,
leucine biosynthesis,
fatty acid alpha-oxidation,
a ubiquinone + NADH + H+ -> NAD+ + a ubiquinol,
Fe(III)-reduction and Fe(II) transport,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
phenylethanol biosynthesis,
pyruvate fermentation to lactate,
superpathway of glyoxylate cycle and fatty acid degradation,
fatty acid omega-oxidation,
galactose degradation III,
ethanol degradation II (cytosol),
sucrose biosynthesis I,
valine degradation I,
folate transformations II 		0.75 0.42 -0.45 C0186
90 C0099 Glucose-1-phosphate α,β-D-Glucose-1-phosphate α-D-Glucose-1-phosphate; β-D-Glucose-1-phosphate galactose degradation I (Leloir pathway) 0.73 0.45 -0.44 C0099
91 C0088 FAD - FAD cytokinins degradation,
lysine degradation II,
valine degradation I,
isoleucine degradation I,
flavin biosynthesis I (bacteria and plants) 		0.72 0.42 -0.45 C0088
92 C0094 Galactosamine D-Galactosamine - - 0.71 0.5 -0.45
93 C0053 ADP - ADP phosphatidylcholine biosynthesis I,
mannitol degradation II,
lipid IVA biosynthesis,
stachyose degradation,
Rubisco shunt,
copper transport II,
glycerol degradation IV,
chorismate biosynthesis,
folate polyglutamylation II,
galactose degradation III,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis,
UDP-L-arabinose biosynthesis II (from L-arabinose),
cadmium transport I,
folate polyglutamylation,
coenzyme A biosynthesis,
sulfate activation for sulfonation,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
pyrimidine deoxyribonucleotides de novo biosynthesis I,
galactose degradation II,
inosine-5'-phosphate biosynthesis II,
ribose degradation,
acetyl-CoA biosynthesis (from citrate),
inositol pyrophosphates biosynthesis,
fatty acid biosynthesis initiation I,
xylose degradation I,
adenine and adenosine salvage VI,
TCA cycle variation III (eukaryotic),
tetrahydrofolate biosynthesis II,
phosphatidylethanolamine biosynthesis II,
pyridoxal 5'-phosphate salvage pathway,
citrulline biosynthesis,
trans-zeatin biosynthesis,
glutamine biosynthesis I,
arginine biosynthesis II (acetyl cycle),
L-Ndelta-acetylornithine biosynthesis,
mevalonate pathway I,
methionine biosynthesis II,
trehalose degradation II (trehalase),
citrulline degradation,
methionine salvage pathway,
TCA cycle variation V (plant),
chlorophyllide a biosynthesis I,
starch degradation I,
methylerythritol phosphate pathway,
pyridine nucleotide cycling (plants),
ceramide degradation,
biotin-carboxyl carrier protein assembly,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
UDP-D-galacturonate biosynthesis II (from D-galacturonate),
asparagine biosynthesis III (tRNA-dependent),
superpathway of glyoxylate cycle and fatty acid degradation,
NAD/NADH phosphorylation and dephosphorylation,
1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3),
galactose degradation I (Leloir pathway),
uridine-5'-phosphate biosynthesis,
lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3),
sucrose degradation III,
lysine biosynthesis VI,
sphingolipid biosynthesis (plants),
choline biosynthesis I,
GDP-glucose biosynthesis,
photorespiration,
gamma-glutamyl cycle (plant pathway),
5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
thiamine biosynthesis II,
proline biosynthesis III,
glutathione biosynthesis,
folate transformations II,
ornithine biosynthesis,
diphthamide biosynthesis,
S-methyl-5'-thioadenosine degradation I,
starch biosynthesis,
arginine biosynthesis I,
homoserine biosynthesis,
flavin biosynthesis I (bacteria and plants),
sucrose biosynthesis I,
leucine degradation I,
glycolysis I,
pyrimidine ribonucleotides interconversion,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza),
glycolysis IV (plant cytosol),
Calvin-Benson-Bassham cycle,
UDP-D-glucuronate biosynthesis (from myo-inositol),
guanine and guanosine salvage III,
glutamine biosynthesis III,
L-glutamine biosynthesis II (tRNA-dependent),
GDP-L-fucose biosynthesis II (from L-fucose),
nitrate reduction II (assimilatory),
ammonia assimilation cycle II,
gluconeogenesis I,
threonine biosynthesis from homoserine,
mannose degradation,
urea cycle,
lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3),
biotin biosynthesis II 		0.7 0.44 -0.44 C0053
94 C0032 3-Phosphoglyceric acid 3-Phospho-(R)-glyceric acid 3-Phosphoglycerate glycolysis I,
gluconeogenesis I,
Calvin-Benson-Bassham cycle,
sucrose biosynthesis I,
serine biosynthesis,
photorespiration,
Rubisco shunt,
glycolysis IV (plant cytosol) 		0.67 0.44 -0.44 C0032
95 C0262 UDP-glucuronic acid - UDP-D-glucuronate xylan biosynthesis,
UDP-D-glucuronate biosynthesis (from myo-inositol),
UDP-D-galacturonate biosynthesis I (from UDP-D-glucuronate),
UDP-D-apiose biosynthesis (from UDP-D-glucuronate),
galactose degradation III,
UDP-D-xylose and UDP-D-glucuronate biosynthesis 		0.66 0.43 -0.46 C0262
96 C0075 dGDP - dGDP purine nucleotide metabolism (phosphotransfer and nucleotide modification) 0.66 0.44 -0.44 C0075
97 C0149 Mevalonolactone D,L-Mevalonolactone - terpenoid biosynthesis 0.66 0.45 -0.44
98 C0005 β-Fructose-6-phosphate β-D-Fructose-6-phosphate D-Fructose-6-phosphate starch biosynthesis,
Rubisco shunt,
Calvin-Benson-Bassham cycle,
mannitol degradation II,
ascorbate biosynthesis I (L-galactose pathway),
UDP-N-acetyl-D-glucosamine biosynthesis II,
GDP-mannose biosynthesis,
mannose degradation,
sucrose biosynthesis I,
sucrose degradation III,
glycolysis IV (plant cytosol),
pentose phosphate pathway (non-oxidative branch),
glycolysis I,
superpathway of sucrose and starch metabolism II (photosynthetic tissue),
D-mannose degradation,
gluconeogenesis I 		0.63 0.33 -0.31 C0005
99 C0259 Tyramine - Tyramine hydroxycinnamic acid tyramine amides biosynthesis,
suberin biosynthesis 		0.6 0.32 -0.32 C0259
100 C0097 Glucosamine-6-phosphate D-Glucosamine-6-phosphate D-Glucosamine-6-phosphate UDP-N-acetyl-D-glucosamine biosynthesis II 0.57 0.32 -0.32 C0097
101 C0062 Betain - - - 0.56 0.29 -0.31
102 C0114 Homocystine L-Homocystine - - 0.55 0.3 -0.29
103 C0065 Cellobiose D-(+)-Cellobiose Cellobiose xyloglucan biosynthesis,
starch degradation I 		-0.54 0.33 -0.32 C0065