AT3G53690 : -
Query Information
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AGICode AT3G53690
Description RING/U-box superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G53690 RING/U-box superfamily protein 1 0.31 -0.32
2 AT3G21100 RNA-binding (RRM/RBD/RNP motifs) family protein -0.74 0.31 -0.32
3 AT5G08190 nuclear factor Y, subunit B12 nuclear factor Y, subunit B12 0.73 0.31 -0.3
4 AT4G16444 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
CHD5-like protein (InterPro:IPR007514); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.71 0.32 -0.29
5 AT1G63300 Myosin heavy chain-related protein -0.7 0.33 -0.33
6 AT2G45200 golgi snare 12 ATGOS12, golgi snare 12 0.69 0.3 -0.32
7 AT5G03250 Phototropic-responsive NPH3 family protein -0.69 0.31 -0.34
8 AT1G76200 unknown protein; Has 96 Blast hits to 96 proteins in 48
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 47;
Plants - 38; Viruses - 0; Other Eukaryotes - 11 (source:
NCBI BLink).		 0.69 0.3 -0.32
9 AT4G14970 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED
DURING: 6 growth stages; Has 257 Blast hits to 164 proteins
in 70 species: Archae - 0; Bacteria - 4; Metazoa - 189;
Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 26
(source: NCBI BLink).		 -0.68 0.32 -0.32
10 AT5G53080 Tetratricopeptide repeat (TPR)-like superfamily protein -0.68 0.33 -0.32
11 AT3G01390 vacuolar membrane ATPase 10 AVMA10, vacuolar membrane ATPase
10		 0.68 0.32 -0.31
12 AT5G09630 LisH/CRA/RING-U-box domains-containing protein 0.67 0.33 -0.32
13 AT5G57320 villin, putative villin 5 -0.67 0.3 -0.33
14 AT1G14200 RING/U-box superfamily protein 0.67 0.32 -0.31
15 AT2G41930 Protein kinase superfamily protein 0.67 0.33 -0.3
16 AT5G19030 RNA-binding (RRM/RBD/RNP motifs) family protein 0.67 0.28 -0.33
17 AT1G68240 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.66 0.3 -0.3
18 AT2G33460 ROP-interactive CRIB motif-containing protein 1 ROP-interactive CRIB
motif-containing protein 1		 -0.66 0.32 -0.32
19 AT2G21780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G39360.1); Has 13 Blast hits
to 13 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.66 0.32 -0.31
20 AT3G55830 Nucleotide-diphospho-sugar transferases superfamily protein ECTOPICALLY PARTING CELLS 0.65 0.3 -0.31
21 AT4G35170 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.65 0.33 -0.32
22 AT3G27930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; Has 35
Blast hits to 35 proteins in 12 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.65 0.32 -0.3
23 AT5G60280 Concanavalin A-like lectin protein kinase family protein -0.65 0.29 -0.31
24 AT5G34830 unknown protein; Has 19 Blast hits to 19 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0;
Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.65 0.28 -0.33
25 AT2G13230 transposable element gene 0.65 0.32 -0.33
26 AT3G56870 unknown protein; Has 204 Blast hits to 201 proteins in 58
species: Archae - 0; Bacteria - 10; Metazoa - 72; Fungi -
8; Plants - 41; Viruses - 0; Other Eukaryotes - 73 (source:
NCBI BLink).		 -0.64 0.3 -0.32
27 AT4G23950 Galactose-binding protein -0.64 0.32 -0.31
28 AT5G45200 Disease resistance protein (TIR-NBS-LRR class) family -0.64 0.31 -0.31
29 AT4G24650 isopentenyltransferase 4 ARABIDOPSIS THALIANA
ISOPENTENYLTRANSFERASE 4,
isopentenyltransferase 4		 -0.64 0.32 -0.3
30 AT2G25820 Integrase-type DNA-binding superfamily protein ethylene and salt inducible 2 0.64 0.31 -0.32
31 AT2G22570 nicotinamidase 1 A. THALIANA NICOTINAMIDASE 1,
nicotinamidase 1		 0.64 0.32 -0.3
32 AT3G42600 transposable element gene -0.63 0.32 -0.31
33 AT2G01130 DEA(D/H)-box RNA helicase family protein -0.63 0.33 -0.32
34 AT5G39310 expansin A24 ATEXP24, expansin A24, ATHEXP
ALPHA 1.19, EXPANSIN 24, expansin
A24		 0.63 0.32 -0.31
35 AT5G39250 F-box family protein 0.63 0.33 -0.33
36 AT3G04810 NIMA-related kinase 2 NIMA-related kinase 2,
NIMA-related kinase 2		 -0.63 0.31 -0.33
37 AT2G44480 beta glucosidase 17 beta glucosidase 17 0.63 0.36 -0.31
38 AT1G24520 homolog of Brassica campestris pollen protein 1 homolog of Brassica campestris
pollen protein 1		 0.63 0.34 -0.32
39 AT3G50400 GDSL-like Lipase/Acylhydrolase superfamily protein -0.63 0.3 -0.33
40 AT5G48670 AGAMOUS-like 80 AGAMOUS-like 80, FEM111 0.63 0.31 -0.33
41 AT5G08139 RING/U-box superfamily protein 0.63 0.31 -0.33
42 AT4G37740 growth-regulating factor 2 growth-regulating factor 2,
growth-regulating factor 2		 -0.62 0.31 -0.31
43 AT3G62880 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 ATOEP16-4 0.62 0.31 -0.31
44 AT2G34710 Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein		 ATHB-14, ARABIDOPSIS THALIANA
HOMEOBOX PROTEIN 14, PHABULOSA,
PHABULOSA 1D		 -0.62 0.32 -0.31
45 AT1G68460 isopentenyltransferase 1 Arabidopsis thaliana
isopentenyltransferase 1,
isopentenyltransferase 1		 -0.62 0.33 -0.32
46 AT1G21300 transposable element gene 0.62 0.33 -0.31
47 AT5G10100 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 trehalose-6-phosphate phosphatase
I		 -0.62 0.3 -0.32
48 AT5G22030 ubiquitin-specific protease 8 ubiquitin-specific protease 8 -0.62 0.3 -0.32
49 AT2G26630 transposable element gene -0.61 0.3 -0.32
50 AT3G58280 Arabidopsis phospholipase-like protein (PEARLI 4) with
TRAF-like domain		 -0.61 0.31 -0.32
51 AT5G11290 Plant protein of unknown function (DUF247) -0.61 0.29 -0.3
52 AT1G33870 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.61 0.31 -0.34
53 AT1G26260 cryptochrome-interacting basic-helix-loop-helix 5 cryptochrome-interacting
basic-helix-loop-helix 5		 -0.61 0.3 -0.29
54 AT4G19910 Toll-Interleukin-Resistance (TIR) domain family protein -0.61 0.33 -0.31
55 AT1G72570 Integrase-type DNA-binding superfamily protein 0.61 0.34 -0.31
56 AT5G24240 Phosphatidylinositol 3- and 4-kinase ;Ubiquitin family
protein		 0.61 0.33 -0.32
57 AT3G61530 Phosphoenolpyruvate carboxylase family protein PANB2 0.61 0.32 -0.31
58 AT5G64950 Mitochondrial transcription termination factor family
protein		 -0.6 0.32 -0.34
59 AT3G02630 Plant stearoyl-acyl-carrier-protein desaturase family
protein		 0.6 0.32 -0.33
60 AT3G57920 squamosa promoter binding protein-like 15 squamosa promoter binding
protein-like 15		 -0.6 0.3 -0.31
61 AT1G68340 Protein of unknown function (DUF1639) 0.6 0.3 -0.31
62 AT1G14390 Leucine-rich repeat protein kinase family protein -0.6 0.31 -0.33
63 AT4G28395 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 ANTHER 7, ARABIDOPSIS THALIANA
ANTHER 7		 -0.6 0.3 -0.29
64 AT1G72410 COP1-interacting protein-related -0.59 0.32 -0.31
65 AT5G28620 protein kinase C-related 0.59 0.31 -0.32
66 AT5G65780 branched-chain amino acid aminotransferase 5 /
branched-chain amino acid transaminase 5 (BCAT5)		 ATBCAT-5 0.59 0.32 -0.32
67 AT4G33640 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.59 0.29 -0.31
68 AT2G15660 AGAMOUS-like 95 AGAMOUS-like 95 -0.59 0.3 -0.32
69 AT3G20020 protein arginine methyltransferase 6 ARABIDOPSIS THALIANA PROTEIN
ARGININE METHYLTRANSFERASE 6,
protein arginine methyltransferase
6		 -0.59 0.3 -0.31
70 AT5G43000 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 0.59 0.32 -0.32
71 AT3G48480 Cysteine proteinases superfamily protein -0.59 0.31 -0.33
72 AT4G11690 Pentatricopeptide repeat (PPR-like) superfamily protein -0.59 0.31 -0.31
73 AT1G19290 Pentatricopeptide repeat (PPR) superfamily protein -0.59 0.31 -0.33
74 AT1G03910 EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Cactin protein,
cactus-binding domain, C-terminal (InterPro:IPR019134),
Cactin, central region (InterPro:IPR018816); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G36815.2); Has 11711 Blast hits to 7382 proteins
in 452 species: Archae - 31; Bacteria - 352; Metazoa -
6006; Fungi - 1138; Plants - 599; Viruses - 33; Other
Eukaryotes - 3552 (source: NCBI BLink).		 -0.58 0.31 -0.3
75 AT1G05310 Pectin lyase-like superfamily protein -0.58 0.3 -0.32
76 AT5G60690 Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein		 INTERFASCICULAR FIBERLESS,
INTERFASCICULAR FIBERLESS 1,
REVOLUTA		 -0.58 0.31 -0.34
77 AT4G00232 DNA-binding storekeeper protein-related transcriptional
regulator		 0.58 0.3 -0.31
78 AT3G13840 GRAS family transcription factor -0.58 0.3 -0.31
79 AT3G26790 AP2/B3-like transcriptional factor family protein FUSCA 3 0.58 0.33 -0.29
80 AT5G25475 AP2/B3-like transcriptional factor family protein -0.58 0.34 -0.3
81 AT2G10870 transposable element gene 0.58 0.32 -0.33
82 AT1G15280 CASC3/Barentsz eIF4AIII binding -0.58 0.32 -0.33
83 AT1G16360 LEM3 (ligand-effect modulator 3) family protein / CDC50
family protein		 0.57 0.33 -0.32
84 AT5G60210 ROP interactive partner 5 ROP interactive partner 5 -0.57 0.35 -0.31
85 AT3G42330 transposable element gene -0.57 0.3 -0.33
86 AT3G49400 Transducin/WD40 repeat-like superfamily protein -0.57 0.29 -0.31
87 AT2G16090 RING/U-box superfamily protein ARIADNE 2, ARABIDOPSIS ARIADNE 2 -0.57 0.31 -0.31
88 AT3G11690 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G06380.1); Has 84 Blast
hits to 84 proteins in 12 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.57 0.35 -0.3
89 AT5G13130 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
family protein		 0.57 0.35 -0.31
90 AT4G09960 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 11, SEEDSTICK 0.57 0.32 -0.32
91 AT1G77730 Pleckstrin homology (PH) domain superfamily protein -0.57 0.3 -0.31
92 AT1G60180 pseudogene of F-box family protein 0.57 0.32 -0.33
93 AT5G65590 Dof-type zinc finger DNA-binding family protein 0.57 0.3 -0.31
94 AT4G36105 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED
DURING: LP.04 four leaves visible, 4 anthesis, petal
differentiation and expansion stage; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G17990.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.57 0.31 -0.32
95 AT3G15930 Pentatricopeptide repeat (PPR) superfamily protein -0.57 0.31 -0.29
96 AT2G14110 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.57 0.3 -0.33
97 AT1G34670 myb domain protein 93 myb domain protein 93, myb domain
protein 93		 -0.57 0.32 -0.32
98 AT1G47885 Ribonuclease inhibitor -0.57 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
99 C0192 Oxalic acid - Oxalate ascorbate degradation -0.75 0.42 -0.46 C0192
100 C0212 PR_MST_2336.8 - - - -0.67 0.47 -0.45
101 C0059 Arginine amide - - - -0.65 0.41 -0.44
102 C0019 1-O-β-Glucopyranosylsinapic acid 1-O-β-D-Glucopyranosylsinapic acid - phenylpropanoid pathwayl,
lignin biosynthesis 		-0.65 0.47 -0.41
103 C0248 Sulfoquinovosyldiacylglycerol-36:3 - Sulfoquinovosyldiacylglycerol sulfolipid biosynthesis -0.64 0.51 -0.47 C0248