AT4G37760 : squalene epoxidase 3
Query Information
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AGICode AT4G37760
Description squalene epoxidase 3
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G37760 squalene epoxidase 3 squalene epoxidase 3 1 0.34 -0.31
2 AT5G64170 dentin sialophosphoprotein-related 0.82 0.35 -0.31
3 AT1G48100 Pectin lyase-like superfamily protein 0.77 0.35 -0.33
4 AT1G30370 alpha/beta-Hydrolases superfamily protein DAD1-like acylhydrolase -0.77 0.31 -0.33
5 AT5G15910 NAD(P)-binding Rossmann-fold superfamily protein 0.75 0.32 -0.33
6 AT2G22240 myo-inositol-1-phosphate synthase 2 INOSITOL 3-PHOSPHATE SYNTHASE 2,
MYO-INOSITOL-1-PHOSTPATE SYNTHASE
2, myo-inositol-1-phosphate
synthase 2		 0.75 0.29 -0.31
7 AT5G35460 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2838 (InterPro:IPR021261); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.74 0.31 -0.33
8 AT5G07820 Plant calmodulin-binding protein-related -0.73 0.32 -0.31
9 AT1G06040 B-box zinc finger family protein B-box domain protein 24, SALT
TOLERANCE		 0.73 0.31 -0.31
10 AT5G39570 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cytosol, nucleus;
EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14
growth stages; BEST Arabidopsis thaliana protein match is:
glycine-rich protein (TAIR:AT3G29075.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.73 0.29 -0.3
11 AT4G30830 Protein of unknown function, DUF593 0.72 0.31 -0.35
12 AT3G62930 Thioredoxin superfamily protein -0.71 0.33 -0.31
13 AT4G32770 tocopherol cyclase, chloroplast / vitamin E deficient 1
(VTE1) / sucrose export defective 1 (SXD1)		 SUCROSE EXPORT DEFECTIVE 1,
VITAMIN E DEFICIENT 1		 0.71 0.32 -0.32
14 AT2G33480 NAC domain containing protein 41 NAC domain containing protein 41,
NAC domain containing protein 41		 -0.7 0.33 -0.31
15 AT2G32090 Lactoylglutathione lyase / glyoxalase I family protein 0.7 0.32 -0.31
16 AT5G23890 LOCATED IN: mitochondrion, chloroplast thylakoid membrane,
chloroplast, plastid, chloroplast envelope; EXPRESSED IN:
24 plant structures; EXPRESSED DURING: 14 growth stages;
CONTAINS InterPro DOMAIN/s: S-layer homology domain
(InterPro:IPR001119); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G52410.2); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.7 0.31 -0.33
17 AT3G62700 multidrug resistance-associated protein 10 ATP-binding cassette C14,
multidrug resistance-associated
protein 10, multidrug
resistance-associated protein 10		 0.7 0.32 -0.34
18 AT5G53970 Tyrosine transaminase family protein tyrosine aminotransferase 7 0.7 0.3 -0.32
19 AT4G39780 Integrase-type DNA-binding superfamily protein -0.7 0.31 -0.3
20 AT3G47500 cycling DOF factor 3 cycling DOF factor 3 0.7 0.32 -0.32
21 AT5G67030 zeaxanthin epoxidase (ZEP) (ABA1) ABA DEFICIENT 1, ARABIDOPSIS
THALIANA ABA DEFICIENT 1,
ARABIDOPSIS THALIANA ZEAXANTHIN
EPOXIDASE, IMPAIRED IN
BABA-INDUCED STERILITY 3, LOW
EXPRESSION OF OSMOTIC
STRESS-RESPONSIVE GENES 6,
NON-PHOTOCHEMICAL QUENCHING 2,
ZEAXANTHIN EPOXIDASE		 0.7 0.31 -0.31
22 AT1G22750 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF1475 (InterPro:IPR009943);
Has 185 Blast hits to 155 proteins in 21 species: Archae -
0; Bacteria - 8; Metazoa - 3; Fungi - 0; Plants - 64;
Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink).		 0.69 0.33 -0.33
23 AT5G56870 beta-galactosidase 4 beta-galactosidase 4 -0.69 0.28 -0.34
24 AT3G18040 MAP kinase 9 MAP kinase 9 0.69 0.29 -0.32
25 AT4G12000 SNARE associated Golgi protein family 0.69 0.31 -0.31
26 AT1G22500 RING/U-box superfamily protein Arabidopsis thaliana Arabidopsis
toxicos en levadura 15,
Arabidopsis toxicos en levadura 15		 -0.69 0.32 -0.29
27 AT3G26400 eukaryotic translation initiation factor 4B1 eukaryotic translation initiation
factor 4B1		 0.69 0.32 -0.32
28 AT2G29080 FTSH protease 3 FTSH protease 3 0.68 0.32 -0.32
29 AT5G47650 nudix hydrolase homolog 2 nudix hydrolase homolog 2,
ARABIDOPSIS THALIANA NUDIX
HYDROLASE HOMOLOG 2, nudix
hydrolase homolog 2		 0.68 0.31 -0.35
30 AT2G34460 NAD(P)-binding Rossmann-fold superfamily protein 0.68 0.32 -0.3
31 AT2G29650 phosphate transporter 4;1 anion transporter 1, phosphate
transporter 4;1		 0.68 0.32 -0.32
32 AT1G19710 UDP-Glycosyltransferase superfamily protein -0.68 0.3 -0.32
33 AT5G16630 DNA repair protein Rad4 family ATRAD4, RAD4 0.68 0.31 -0.32
34 AT4G22270 Protein of unknown function (DUF3537) ARABIDOPSIS MEMBRANE RELATED
BIGGER1, MEMBRANE RELATED BIGGER1		 0.68 0.29 -0.3
35 AT5G58070 temperature-induced lipocalin TEMPERATURE-INDUCED LIPOCALIN,
temperature-induced lipocalin		 0.68 0.31 -0.31
36 AT3G61220 NAD(P)-binding Rossmann-fold superfamily protein short-chain
dehydrogenase/reductase 1		 0.67 0.32 -0.32
37 AT5G52570 beta-carotene hydroxylase 2 B2, BETA CAROTENOID HYDROXYLASE 2,
beta-carotene hydroxylase 2, CHY2		 0.67 0.33 -0.31
38 AT2G46830 circadian clock associated 1 AtCCA1, circadian clock associated
1		 0.67 0.32 -0.32
39 AT5G64080 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 AtXYP1, xylogen protein 1 0.67 0.31 -0.29
40 AT3G50740 UDP-glucosyl transferase 72E1 UDP-glucosyl transferase 72E1 -0.67 0.32 -0.33
41 AT1G69850 nitrate transporter 1:2 nitrate transporter 1:2, nitrate
transporter 1:2, NTL1		 -0.67 0.33 -0.29
42 AT4G23920 UDP-D-glucose/UDP-D-galactose 4-epimerase 2 UDP-GLC 4-EPIMERASE 2,
UDP-D-glucose/UDP-D-galactose
4-epimerase 2		 0.67 0.33 -0.33
43 AT5G02810 pseudo-response regulator 7 APRR7, pseudo-response regulator 7 0.66 0.31 -0.31
44 AT5G05460 Glycosyl hydrolase family 85 AtENGase85A,
Endo-beta-N-acetyglucosaminidase
85A		 -0.66 0.3 -0.3
45 AT2G27285 Coiled-coil domain-containing protein 55 (DUF2040) 0.66 0.33 -0.33
46 AT3G50070 CYCLIN D3;3 CYCLIN D3;3 -0.66 0.34 -0.32
47 AT4G03570 Cystatin/monellin superfamily protein -0.66 0.29 -0.31
48 AT1G31750 proline-rich family protein 0.66 0.34 -0.33
49 AT1G05570 callose synthase 1 ATGSL06, ATGSL6, callose synthase
1, GSL06, GLUCAN SYNTHASE-LIKE 6		 -0.66 0.31 -0.29
50 AT3G13730 cytochrome P450, family 90, subfamily D, polypeptide 1 cytochrome P450, family 90,
subfamily D, polypeptide 1		 -0.66 0.3 -0.33
51 AT5G20250 Raffinose synthase family protein DARK INDUCIBLE 10, raffinose
synthase 6		 -0.66 0.33 -0.33
52 AT1G72200 RING/U-box superfamily protein -0.66 0.31 -0.32
53 AT3G29760 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.66 0.32 -0.28
54 AT3G02885 GAST1 protein homolog 5 GAST1 protein homolog 5 -0.66 0.33 -0.32
55 AT3G09020 alpha 1,4-glycosyltransferase family protein -0.65 0.32 -0.29
56 AT1G73650 Protein of unknown function (DUF1295) 0.65 0.32 -0.33
57 AT3G06600 unknown protein; Has 14 Blast hits to 14 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.65 0.31 -0.3
58 AT4G36670 Major facilitator superfamily protein AtPLT6, AtPMT6, polyol transporter
6, polyol/monosaccharide
transporter 6		 -0.65 0.32 -0.31
59 AT1G06160 octadecanoid-responsive Arabidopsis AP2/ERF 59 octadecanoid-responsive
Arabidopsis AP2/ERF 59		 -0.65 0.33 -0.33
60 AT5G19340 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G05980.1); Has 1000 Blast hits
to 906 proteins in 61 species: Archae - 0; Bacteria - 4;
Metazoa - 62; Fungi - 36; Plants - 128; Viruses - 4; Other
Eukaryotes - 766 (source: NCBI BLink).		 -0.65 0.29 -0.34
61 AT3G14595 Ribosomal protein L18ae family 0.65 0.33 -0.32
62 AT1G17250 receptor like protein 3 receptor like protein 3, receptor
like protein 3		 -0.65 0.31 -0.34
63 AT5G23670 long chain base2 long chain base2 -0.65 0.32 -0.33
64 AT5G61810 Mitochondrial substrate carrier family protein ATP/phosphate carrier 1 0.65 0.31 -0.34
65 AT4G25940 ENTH/ANTH/VHS superfamily protein -0.65 0.31 -0.35
66 AT2G01820 Leucine-rich repeat protein kinase family protein 0.65 0.31 -0.3
67 AT1G43800 Plant stearoyl-acyl-carrier-protein desaturase family
protein		 -0.64 0.33 -0.28
68 AT4G00450 RNA polymerase II transcription mediators CENTER CITY, CRYPTIC PRECOCIOUS 0.64 0.31 -0.33
69 AT1G03210 Phenazine biosynthesis PhzC/PhzF protein -0.64 0.31 -0.32
70 AT5G47020 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G11700.2); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.64 0.31 -0.31
71 AT2G01670 nudix hydrolase homolog 17 nudix hydrolase homolog 17, nudix
hydrolase homolog 17		 -0.64 0.31 -0.31
72 AT2G25530 AFG1-like ATPase family protein 0.63 0.3 -0.31
73 AT1G32870 NAC domain protein 13 Arabidopsis NAC domain containing
protein 13, NAC domain protein 13,
NAC domain protein 13		 0.63 0.31 -0.33
74 AT5G39850 Ribosomal protein S4 -0.63 0.31 -0.29
75 AT4G19420 Pectinacetylesterase family protein -0.63 0.29 -0.31
76 AT3G62860 alpha/beta-Hydrolases superfamily protein -0.63 0.31 -0.33
77 AT4G00430 plasma membrane intrinsic protein 1;4 plasma membrane intrinsic protein
1;4, PLASMA MEMBRANE INTRINSIC
PROTEIN 1E, TRANSMEMBRANE PROTEIN
C		 0.63 0.32 -0.32
78 AT1G12220 Disease resistance protein (CC-NBS-LRR class) family RESISTANT TO P. SYRINGAE 5 -0.63 0.31 -0.31
79 AT3G26230 cytochrome P450, family 71, subfamily B, polypeptide 24 cytochrome P450, family 71,
subfamily B, polypeptide 24		 -0.63 0.32 -0.31
80 AT5G42270 FtsH extracellular protease family FTSH5, VARIEGATED 1 0.63 0.31 -0.31
81 AT1G03850 Glutaredoxin family protein glutaredoxin 13, glutaredoxin 13 -0.63 0.31 -0.33
82 AT1G10640 Pectin lyase-like superfamily protein 0.62 0.3 -0.31
83 AT3G62280 GDSL-like Lipase/Acylhydrolase superfamily protein -0.62 0.3 -0.31
84 AT2G39010 plasma membrane intrinsic protein 2E PLASMA MEMBRANE INTRINSIC PROTEIN
2;6, plasma membrane intrinsic
protein 2E		 0.62 0.3 -0.31
85 AT3G19540 Protein of unknown function (DUF620) -0.62 0.32 -0.32
86 AT1G65220 ARM repeat superfamily protein 0.62 0.32 -0.32
87 AT5G27200 acyl carrier protein 5 acyl carrier protein 5 -0.62 0.31 -0.29
88 AT2G40930 ubiquitin-specific protease 5 ATUBP5, PIGMENT DEFECTIVE EMBRYO
323, ubiquitin-specific protease 5		 0.62 0.34 -0.3
89 AT5G44670 Domain of unknown function (DUF23) 0.62 0.33 -0.31
90 AT4G28500 NAC domain containing protein 73 NAC domain containing protein 73,
NAC domain containing protein 73,
SECONDARY WALL-ASSOCIATED NAC
DOMAIN PROTEIN 2		 0.62 0.33 -0.33
91 AT3G26310 cytochrome P450, family 71, subfamily B, polypeptide 35 cytochrome P450, family 71,
subfamily B, polypeptide 35		 0.62 0.33 -0.31
92 AT3G57020 Calcium-dependent phosphotriesterase superfamily protein 0.61 0.32 -0.36
93 AT1G20430 unknown protein; Has 29 Blast hits to 29 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.61 0.29 -0.32
94 AT4G16650 O-fucosyltransferase family protein 0.61 0.3 -0.32
95 AT5G37550 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G66190.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.61 0.32 -0.31
96 AT3G16650 Transducin/WD40 repeat-like superfamily protein -0.61 0.3 -0.32
97 AT5G14420 RING domain ligase2 RING domain ligase2 0.61 0.31 -0.32
98 AT3G22840 Chlorophyll A-B binding family protein ELIP, EARLY LIGHT-INDUCABLE
PROTEIN		 0.61 0.34 -0.34
99 AT5G48150 GRAS family transcription factor phytochrome a signal transduction
1		 0.61 0.31 -0.33
100 AT5G63320 nuclear protein X1 nuclear protein X1 0.61 0.29 -0.32
101 AT4G27940 manganese tracking factor for mitochondrial SOD2 ARABIDOPSIS MANGANESE TRACKING
FACTOR FOR MITOCHONDRIAL SOD2,
manganese tracking factor for
mitochondrial SOD2		 0.61 0.32 -0.32
102 AT3G20160 Terpenoid synthases superfamily protein -0.6 0.31 -0.32
103 AT2G30280 RNA-directed DNA methylation 4 DEFECTIVE IN MERISTEM SILENCING 4,
RNA-directed DNA methylation 4		 -0.59 0.32 -0.31
104 AT1G19600 pfkB-like carbohydrate kinase family protein -0.59 0.31 -0.32
105 AT5G47450 tonoplast intrinsic protein 2;3 ARABIDOPSIS THALIANA TONOPLAST
INTRINSIC PROTEIN 2;3,
DELTA-TONOPLAST INTRINSIC PROTEIN
3, tonoplast intrinsic protein 2;3		 -0.58 0.33 -0.32
106 AT3G18880 Nucleic acid-binding, OB-fold-like protein -0.58 0.32 -0.33
107 AT3G60550 cyclin p3;2 cyclin p3;2 -0.58 0.33 -0.3
108 AT5G42830 HXXXD-type acyl-transferase family protein -0.57 0.31 -0.32
109 AT3G52710 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 19 plant structures; EXPRESSED
DURING: 9 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G36220.1); Has 64 Blast
hits to 64 proteins in 10 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.57 0.33 -0.31
110 AT5G55780 Cysteine/Histidine-rich C1 domain family protein -0.57 0.32 -0.33
111 AT1G79400 cation/H+ exchanger 2 cation/H+ exchanger 2, cation/H+
exchanger 2		 -0.57 0.34 -0.35
112 AT3G49370 Calcium-dependent protein kinase (CDPK) family protein -0.57 0.31 -0.31
113 AT3G46530 NB-ARC domain-containing disease resistance protein RECOGNITION OF PERONOSPORA
PARASITICA 13		 -0.57 0.3 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
114 C0168 MST_2023.2 - - - 0.67 0.48 -0.44
115 C0098 Glucose D-Glucose alpha-D-glucose; beta-D-glucose trehalose degradation II (trehalase),
indole glucosinolate breakdown (active in intact plant cell),
coumarin biosynthesis (via 2-coumarate),
glucosinolate biosynthesis from tryptophan,
sinapate ester biosynthesis,
GDP-glucose biosynthesis,
coniferin metabolism,
melibiose degradation,
indole glucosinolate breakdown (insect chewing induced) 		0.63 0.34 -0.3 C0098
116 C0090 Fructose D-(-)-Fructose D-Fructose sorbitol degradation I,
fructan degradation 		0.62 0.33 -0.3 C0090