AT4G30400 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT4G30400
Description RING/U-box superfamily protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G30400 RING/U-box superfamily protein 1 0.29 -0.31
2 AT2G26180 IQ-domain 6 IQ-domain 6 0.78 0.33 -0.32
3 AT1G66250 O-Glycosyl hydrolases family 17 protein 0.77 0.32 -0.31
4 AT5G13330 related to AP2 6l related to AP2 6l -0.76 0.31 -0.32
5 AT3G04070 NAC domain containing protein 47 NAC domain containing protein 47,
NAC domain containing protein 47		 -0.75 0.33 -0.3
6 AT1G70830 MLP-like protein 28 MLP-like protein 28 0.75 0.32 -0.33
7 AT3G56370 Leucine-rich repeat protein kinase family protein 0.75 0.3 -0.33
8 AT1G18250 Pathogenesis-related thaumatin superfamily protein ATLP-1 0.74 0.34 -0.3
9 AT1G69880 thioredoxin H-type 8 thioredoxin H-type 8, thioredoxin
H-type 8		 -0.74 0.32 -0.31
10 AT1G20980 squamosa promoter binding protein-like 14 SQUAMOSA PROMOTER BINDING
PROTEIN-LIKE 14, FBR6, squamosa
promoter binding protein-like 14,
SPL1R2		 -0.74 0.32 -0.33
11 AT1G77380 amino acid permease 3 amino acid permease 3, ATAAP3 -0.73 0.33 -0.33
12 AT5G44290 Protein kinase superfamily protein -0.73 0.33 -0.3
13 AT5G23400 Leucine-rich repeat (LRR) family protein 0.73 0.32 -0.33
14 AT5G39610 NAC domain containing protein 6 Arabidopsis NAC domain containing
protein 92, NAC domain containing
protein 2, NAC domain containing
protein 6, NAC domain containing
protein 2, NAC domain containing
protein 6, ORESARA 1		 -0.73 0.3 -0.32
15 AT5G25090 early nodulin-like protein 13 AtENODL13, early nodulin-like
protein 13		 0.72 0.32 -0.31
16 AT2G39660 botrytis-induced kinase1 botrytis-induced kinase1 -0.71 0.3 -0.33
17 AT3G03840 SAUR-like auxin-responsive protein family 0.71 0.3 -0.32
18 AT5G25350 EIN3-binding F box protein 2 EIN3-binding F box protein 2 -0.71 0.3 -0.31
19 AT4G26790 GDSL-like Lipase/Acylhydrolase superfamily protein 0.71 0.31 -0.32
20 AT1G29660 GDSL-like Lipase/Acylhydrolase superfamily protein 0.71 0.31 -0.34
21 AT1G72250 Di-glucose binding protein with Kinesin motor domain 0.71 0.32 -0.34
22 AT1G60810 ATP-citrate lyase A-2 ATP-citrate lyase A-2 0.71 0.32 -0.31
23 AT5G50740 Heavy metal transport/detoxification superfamily protein 0.71 0.32 -0.32
24 AT2G40610 expansin A8 ATEXP8, expansin A8, ATHEXP ALPHA
1.11, EXP8, expansin A8		 0.71 0.28 -0.34
25 AT1G27980 dihydrosphingosine phosphate lyase ATDPL1, dihydrosphingosine
phosphate lyase		 -0.7 0.29 -0.31
26 AT3G07880 Immunoglobulin E-set superfamily protein SUPERCENTIPEDE1 0.7 0.31 -0.33
27 AT5G66120 3-dehydroquinate synthase, putative -0.7 0.32 -0.33
28 AT2G21050 like AUXIN RESISTANT 2 like AUXIN RESISTANT 2 0.7 0.32 -0.34
29 AT1G20070 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 11 growth stages; Has 26 Blast hits to 26 proteins
in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 2; Plants - 24; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.7 0.32 -0.32
30 AT2G36080 AP2/B3-like transcriptional factor family protein -0.7 0.31 -0.31
31 AT5G16250 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G02640.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.7 0.33 -0.33
32 AT3G57830 Leucine-rich repeat protein kinase family protein 0.7 0.32 -0.31
33 AT1G25560 AP2/B3 transcription factor family protein ETHYLENE RESPONSE DNA BINDING
FACTOR 1, TEMPRANILLO 1		 -0.69 0.33 -0.31
34 AT2G28120 Major facilitator superfamily protein -0.69 0.31 -0.31
35 AT4G24690 ubiquitin-associated (UBA)/TS-N domain-containing protein /
octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein		 Arabidopsis thaliana next to BRCA1
gene 1, next to BRCA1 gene 1		 -0.69 0.29 -0.31
36 AT1G29500 SAUR-like auxin-responsive protein family 0.69 0.31 -0.3
37 AT5G05510 Mad3/BUB1 homology region 1 0.69 0.31 -0.31
38 AT1G32530 RING/U-box superfamily protein -0.69 0.34 -0.3
39 AT4G38370 Phosphoglycerate mutase family protein 0.68 0.29 -0.32
40 AT3G56170 Ca-2+ dependent nuclease Ca-2+ dependent nuclease -0.68 0.32 -0.32
41 AT2G44190 Family of unknown function (DUF566) ENDOSPERM DEFECTIVE 1, EMBRYO
DEFECTIVE 3116, QWRF domain
containing 5		 0.68 0.32 -0.3
42 AT2G03090 expansin A15 ATEXP15, expansin A15, ATHEXP
ALPHA 1.3, EXPANSIN 15, expansin
A15		 0.68 0.33 -0.32
43 AT4G24040 trehalase 1 ATTRE1, trehalase 1 -0.68 0.32 -0.29
44 AT1G76740 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G76840.1); Has 3683 Blast hits
to 2942 proteins in 407 species: Archae - 9; Bacteria -
440; Metazoa - 1472; Fungi - 269; Plants - 192; Viruses -
8; Other Eukaryotes - 1293 (source: NCBI BLink).		 0.68 0.3 -0.31
45 AT3G05900 neurofilament protein-related 0.68 0.31 -0.31
46 AT4G29020 glycine-rich protein 0.68 0.32 -0.32
47 AT1G19870 IQ-domain 32 IQ-domain 32 0.67 0.32 -0.31
48 AT5G56180 actin-related protein 8 ARP8, actin-related protein 8,
actin-related protein 8		 -0.67 0.31 -0.32
49 AT5G55530 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.67 0.32 -0.29
50 AT1G70550 Protein of Unknown Function (DUF239) 0.67 0.3 -0.32
51 AT2G04850 Auxin-responsive family protein 0.67 0.31 -0.31
52 AT1G80280 alpha/beta-Hydrolases superfamily protein 0.67 0.33 -0.31
53 AT2G44080 ARGOS-like ARGOS-like -0.67 0.31 -0.32
54 AT5G13290 Protein kinase superfamily protein CORYNE, SUPPRESSOR OF LLP1 2 0.66 0.33 -0.33
55 AT3G63150 MIRO-related GTP-ase 2 CALCIUM BINDING GTP-ASE,
MIRO-related GTP-ase 2		 -0.66 0.31 -0.29
56 AT4G15550 indole-3-acetate beta-D-glucosyltransferase indole-3-acetate
beta-D-glucosyltransferase		 -0.65 0.31 -0.32
57 AT4G11080 HMG (high mobility group) box protein 3xHigh Mobility Group-box1 0.65 0.31 -0.31
58 AT5G26330 Cupredoxin superfamily protein 0.65 0.31 -0.32
59 AT1G68810 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.65 0.32 -0.34
60 AT1G70890 MLP-like protein 43 MLP-like protein 43 0.65 0.32 -0.31
61 AT3G02240 Encodes a root meristem growth factor (RGF). Belongs to a
family of functionally redundant homologous peptides that
are secreted, tyrosine-sulfated, and expressed mainly in
the stem cell area and the innermost layer of central
columella cells. RGFs are required for maintenance of the
root stem cell niche and transit amplifying cell
proliferation. Members of this family include: At5g60810
(RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350
(RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240
(RGF7), At2g03830 (RGF8) and At5g64770 (RGF9).		 root meristem growth factor 7 -0.65 0.31 -0.31
62 AT1G69770 chromomethylase 3 chromomethylase 3 0.64 0.3 -0.32
63 AT5G01210 HXXXD-type acyl-transferase family protein -0.64 0.32 -0.33
64 AT2G37520 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger domain		 -0.64 0.32 -0.3
65 AT5G04910 unknown protein; Has 71 Blast hits to 71 proteins in 36
species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 0;
Plants - 40; Viruses - 0; Other Eukaryotes - 14 (source:
NCBI BLink).		 -0.64 0.3 -0.31
66 AT2G20750 expansin B1 expansin B1, ATHEXP BETA 1.5,
expansin B1		 0.64 0.31 -0.33
67 AT4G05520 EPS15 homology domain 2 EPS15 homology domain 2, EPS15
homology domain 2		 0.63 0.31 -0.29
68 AT4G31670 ubiquitin-specific protease 18 ubiquitin-specific protease 18 -0.63 0.35 -0.3
69 AT1G22160 Protein of unknown function (DUF581) 0.63 0.33 -0.31
70 AT3G53420 plasma membrane intrinsic protein 2A PLASMA MEMBRANE INTRINSIC PROTEIN
2, PLASMA MEMBRANE INTRINSIC
PROTEIN 2;1, plasma membrane
intrinsic protein 2A		 0.63 0.32 -0.32
71 AT2G40940 ethylene response sensor 1 ETHYLENE RESPONSE SENSOR, ethylene
response sensor 1		 -0.63 0.3 -0.29
72 AT1G28520 vascular plant one zinc finger protein VASCULAR PLANT ONE ZINC FINGER
PROTEIN, vascular plant one zinc
finger protein		 -0.63 0.32 -0.3
73 AT2G21830 Cysteine/Histidine-rich C1 domain family protein 0.63 0.3 -0.32
74 AT5G43990 SET-domain containing protein lysine methyltransferase
family protein		 SET DOMAIN PROTEIN 18, SUVR2 0.63 0.32 -0.32
75 AT1G67750 Pectate lyase family protein 0.63 0.31 -0.31
76 AT2G41230 unknown protein; Has 75 Blast hits to 75 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 ORGAN SIZE RELATED 1 -0.62 0.3 -0.33
77 AT1G02750 Drought-responsive family protein -0.62 0.32 -0.31
78 AT1G28240 Protein of unknown function (DUF616) -0.62 0.31 -0.31
79 AT5G58490 NAD(P)-binding Rossmann-fold superfamily protein -0.62 0.31 -0.33
80 AT5G14780 formate dehydrogenase formate dehydrogenase -0.62 0.32 -0.31
81 AT2G30600 BTB/POZ domain-containing protein -0.62 0.33 -0.3
82 AT5G63490 CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing
protein		 -0.61 0.29 -0.33
83 AT1G48790 associated molecule with the SH3 domain of STAM 1 associated molecule with the SH3
domain of STAM 1		 -0.61 0.32 -0.31
84 AT3G19520 Protein of unknown function (DUF626) -0.61 0.33 -0.33
85 AT5G65110 acyl-CoA oxidase 2 acyl-CoA oxidase 2, ATACX2 -0.61 0.31 -0.31
86 AT2G30470 high-level expression of sugar-inducible gene 2 high-level expression of
sugar-inducible gene 2,
VP1/ABI3-LIKE 1		 -0.61 0.31 -0.34
87 AT1G77540 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.61 0.33 -0.3
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
88 C0007 β-Sitosterol - Sitosterol plant sterol biosynthesis 0.75 0.43 -0.47 C0007
89 C0023 1,6-Anhydro-β-glucose 1,6-Anhydro-β-D-glucose Levoglucosan - -0.7 0.45 -0.45 C0023
90 C0016 S-Adenosylmethionine S-Adenosyl-L-methionine S-Adenosyl-L-methionine ethylene biosynthesis I (plants),
scopoletin biosynthesis,
quercetinsulphates biosynthesis,
siroheme biosynthesis,
gibberellin inactivation II (methylation),
suberin biosynthesis,
volatile benzenoid biosynthesis I (ester formation),
S-adenosyl-L-methionine cycle II,
methylhalides biosynthesis (plants),
S-methylmethionine cycle,
ubiquinol-9 biosynthesis (eukaryotic),
nicotianamine biosynthesis,
methionine biosynthesis II,
spermine biosynthesis,
choline biosynthesis II,
diphthamide biosynthesis,
homogalacturonan biosynthesis,
phosphatidylcholine biosynthesis II,
methylquercetin biosynthesis,
plastoquinol biosynthesis,
chlorophyllide a biosynthesis I,
ferulate and sinapate biosynthesis,
ubiquinol-10 biosynthesis (eukaryotic),
phenylpropanoid biosynthesis,
free phenylpropanoid acid biosynthesis,
seleno-amino acid detoxification and volatilization I,
plant sterol biosynthesis,
lipoate biosynthesis and incorporation I,
methyl indole-3-acetate interconversion,
cyclopropane and cyclopropene fatty acid biosynthesis,
spermidine biosynthesis I,
thiamine biosynthesis II,
methionine salvage pathway,
spermidine hydroxycinnamic acid conjugates biosynthesis,
simple coumarins biosynthesis,
phosphatidylcholine biosynthesis IV,
glutathione-mediated detoxification II,
S-adenosyl-L-methionine biosynthesis,
methionine degradation I (to homocysteine),
phosphatidylcholine biosynthesis III,
phylloquinol biosynthesis,
choline biosynthesis I,
biotin biosynthesis II,
vitamin E biosynthesis 		0.68 0.47 -0.48 C0016
91 C0160 MST_1509.5 - - - -0.66 0.45 -0.45
92 C0164 MST_1596.8 - - - -0.66 0.45 -0.46
93 C0163 MST_1589.2 - - - -0.64 0.48 -0.48