AT4G30150 : -
Query Information
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AGICode AT4G30150
Description CONTAINS InterPro DOMAIN/s: Nucleolar 27S pre-rRNA processing, Urb2/Npa2 (InterPro:IPR018849); Has 58 Blast hits to 49 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 0; Plants - 44; Viruses - 3; Other Eukaryotes - 7 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G30150 CONTAINS InterPro DOMAIN/s: Nucleolar 27S pre-rRNA
processing, Urb2/Npa2 (InterPro:IPR018849); Has 58 Blast
hits to 49 proteins in 21 species: Archae - 0; Bacteria -
2; Metazoa - 2; Fungi - 0; Plants - 44; Viruses - 3; Other
Eukaryotes - 7 (source: NCBI BLink).		 1 0.32 -0.31
2 AT1G49500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G19030.1); Has 24 Blast hits to 24 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.76 0.32 -0.31
3 AT5G66140 proteasome alpha subunit D2 proteasome alpha subunit D2 0.74 0.32 -0.33
4 AT4G04180 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.74 0.33 -0.28
5 AT2G16365 F-box family protein 0.73 0.32 -0.3
6 AT2G26990 proteasome family protein ATCSN2, CONSTITUTIVE
PHOTOMORPHOGENIC 12, CSN2, FUSCA
12		 0.73 0.31 -0.3
7 AT5G54580 RNA-binding (RRM/RBD/RNP motifs) family protein 0.72 0.32 -0.33
8 AT3G48250 Pentatricopeptide repeat (PPR) superfamily protein Buthionine sulfoximine-insensitive
roots 6		 0.71 0.31 -0.32
9 AT3G12570 FYD FYD 0.71 0.33 -0.33
10 AT3G09840 cell division cycle 48 ATCDC48, cell division cycle 48,
CDC48A		 0.7 0.31 -0.29
11 AT3G04610 RNA-binding KH domain-containing protein flowering locus KH domain 0.7 0.31 -0.32
12 AT1G71730 unknown protein; Has 52 Blast hits to 52 proteins in 24
species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0;
Plants - 41; Viruses - 0; Other Eukaryotes - 7 (source:
NCBI BLink).		 0.7 0.33 -0.33
13 AT1G11390 Protein kinase superfamily protein 0.7 0.33 -0.32
14 AT5G24460 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.69 0.3 -0.31
15 AT5G42955 Protein of unknown function (DUF784) -0.69 0.32 -0.32
16 AT5G14570 high affinity nitrate transporter 2.7 high affinity nitrate transporter
2.7, high affinity nitrate
transporter 2.7		 0.68 0.31 -0.33
17 AT2G30260 U2 small nuclear ribonucleoprotein B U2 small nuclear ribonucleoprotein
B		 0.68 0.3 -0.31
18 AT1G22540 Major facilitator superfamily protein -0.68 0.32 -0.3
19 AT4G03120 C2H2 and C2HC zinc fingers superfamily protein 0.68 0.33 -0.32
20 AT3G26280 cytochrome P450, family 71, subfamily B, polypeptide 4 cytochrome P450, family 71,
subfamily B, polypeptide 4		 -0.68 0.33 -0.34
21 AT5G57080 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: 7 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G26055.1); Has 14 Blast hits to 14 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.68 0.31 -0.32
22 AT3G63460 transducin family protein / WD-40 repeat family protein 0.67 0.33 -0.31
23 AT1G19170 Pectin lyase-like superfamily protein -0.67 0.34 -0.3
24 AT5G65070 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 69, FCL4, MADS
AFFECTING FLOWERING 4		 0.67 0.31 -0.31
25 AT5G58760 damaged DNA binding 2 damaged DNA binding 2 0.66 0.33 -0.29
26 AT1G70630 Nucleotide-diphospho-sugar transferase family protein 0.66 0.32 -0.34
27 AT2G15080 receptor like protein 19 receptor like protein 19, receptor
like protein 19		 -0.66 0.3 -0.32
28 AT5G58210 hydroxyproline-rich glycoprotein family protein 0.66 0.3 -0.32
29 AT5G20180 Ribosomal protein L36 0.66 0.33 -0.32
30 AT2G46220 Uncharacterized conserved protein (DUF2358) -0.66 0.32 -0.32
31 AT1G03270 CBS domain-containing protein with a domain of unknown
function (DUF21)		 -0.66 0.31 -0.32
32 AT5G49380 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF625 (InterPro:IPR006887); BEST Arabidopsis thaliana
protein match is: binding (TAIR:AT3G06670.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.66 0.32 -0.3
33 AT3G17470 Ca2+-activated RelA/spot homolog ATCRSH, Ca2+-activated RelA/spot
homolog		 -0.66 0.31 -0.3
34 AT5G13270 Pentatricopeptide repeat (PPR) superfamily protein REQUIRED FOR ACCD RNA EDITING 1 0.65 0.32 -0.31
35 AT1G69670 cullin 3B ARABIDOPSIS THALIANA CULLIN 3B,
cullin 3B		 0.65 0.3 -0.31
36 AT3G63480 ATP binding microtubule motor family protein -0.65 0.32 -0.31
37 AT1G02460 Pectin lyase-like superfamily protein 0.64 0.3 -0.3
38 AT3G30710 transposable element gene -0.63 0.32 -0.31
39 AT3G09410 Pectinacetylesterase family protein -0.63 0.31 -0.33
40 AT1G69490 NAC-like, activated by AP3/PI Arabidopsis NAC domain containing
protein 29, NAC-LIKE, ACTIVATED BY
AP3/PI, NAC-like, activated by
AP3/PI		 -0.63 0.31 -0.33
41 AT5G64710 Putative endonuclease or glycosyl hydrolase 0.63 0.32 -0.3
42 AT3G05800 AtBS1(activation-tagged BRI1 suppressor 1)-interacting
factor 1		 AtBS1(activation-tagged BRI1
suppressor 1)-interacting factor 1		 0.63 0.32 -0.33
43 AT4G19540 IND1(iron-sulfur protein required for NADH
dehydrogenase)-like		 iron-sulfur protein required for
NADH dehydrogenase,
IND1(iron-sulfur protein required
for NADH dehydrogenase)-like		 -0.62 0.3 -0.33
44 AT5G37380 Chaperone DnaJ-domain superfamily protein 0.62 0.31 -0.31
45 AT4G31270 sequence-specific DNA binding transcription factors -0.62 0.31 -0.31
46 AT3G13670 Protein kinase family protein 0.62 0.33 -0.3
47 AT1G34530 transposable element gene -0.61 0.32 -0.33
48 AT5G20700 Protein of unknown function (DUF581) -0.61 0.31 -0.33
49 AT1G61130 serine carboxypeptidase-like 32 serine carboxypeptidase-like 32 -0.61 0.32 -0.32
50 AT5G49110 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN:
cultured cell; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.61 0.28 -0.31
51 AT5G49410 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G73940.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.61 0.32 -0.33
52 AT3G04890 Uncharacterized conserved protein (DUF2358) -0.61 0.29 -0.31
53 AT2G42560 late embryogenesis abundant domain-containing protein / LEA
domain-containing protein		 -0.61 0.34 -0.29
54 AT1G47750 peroxin 11A peroxin 11A 0.61 0.31 -0.32
55 AT2G35530 basic region/leucine zipper transcription factor 16 AtbZIP16, basic region/leucine
zipper transcription factor 16		 0.61 0.32 -0.31
56 AT3G15940 UDP-Glycosyltransferase superfamily protein -0.6 0.33 -0.34
57 AT4G38900 Basic-leucine zipper (bZIP) transcription factor family
protein		 -0.59 0.33 -0.31
58 AT5G52540 Protein of unknown function (DUF819) -0.59 0.31 -0.32
59 AT2G07110 BEST Arabidopsis thaliana protein match is: Ribosomal
protein S5 domain 2-like superfamily protein
(TAIR:AT3G46210.6); Has 82 Blast hits to 82 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2;
Plants - 75; Viruses - 0; Other Eukaryotes - 5 (source:
NCBI BLink).		 -0.59 0.3 -0.3
60 AT1G31370 Ubiquitin-specific protease family C19-related protein -0.58 0.34 -0.32
61 AT5G51990 C-repeat-binding factor 4 C-repeat-binding factor 4,
DEHYDRATION-RESPONSIVE
ELEMENT-BINDING PROTEIN 1D		 -0.58 0.31 -0.32
62 AT3G60730 Plant invertase/pectin methylesterase inhibitor superfamily -0.58 0.31 -0.3
63 AT1G41900 transposable element gene -0.58 0.31 -0.35
64 AT2G39090 tetratricopeptide repeat (TPR)-containing protein anaphase-promoting complex 7,
AtAPC7		 -0.58 0.32 -0.32
65 AT2G10780 transposable element gene -0.58 0.32 -0.31
66 AT1G72580 unknown protein; Has 3 Blast hits to 3 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.58 0.33 -0.31
67 AT5G49120 Protein of unknown function (DUF581) -0.56 0.33 -0.31
68 AT1G30790 F-box and associated interaction domains-containing protein -0.55 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
69 C0215 PR_MST_2527.1 - - - 0.84 0.41 -0.45
70 C0030 3-Methylsulfinyl-n-propylglucosinolate - 3-Methylsulfinylpropyl-glucosinolate glucosinolate biosynthesis from homomethionine -0.74 0.45 -0.45 C0030
71 C0214 PR_MST_2412.1 - - - 0.65 0.45 -0.44
72 C0213 PR_MST_2410.2 - - - 0.61 0.41 -0.45
73 C0088 FAD - FAD cytokinins degradation,
lysine degradation II,
valine degradation I,
isoleucine degradation I,
flavin biosynthesis I (bacteria and plants) 		-0.58 0.45 -0.43 C0088