AT4G29040 : regulatory particle AAA-ATPase 2A
Query Information
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AGICode AT4G29040
Description regulatory particle AAA-ATPase 2A
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G29040 regulatory particle AAA-ATPase 2A regulatory particle AAA-ATPase 2A 1 0.31 -0.34
2 AT4G10140 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; EXPRESSED
IN: 24 plant structures; EXPRESSED DURING: 15 growth
stages; CONTAINS InterPro DOMAIN/s: Protein of unknown
function DUF2062 (InterPro:IPR018639); BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G33490.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.85 0.3 -0.31
3 AT5G04170 Calcium-binding EF-hand family protein 0.85 0.32 -0.32
4 AT1G48850 chorismate synthase, putative /
5-enolpyruvylshikimate-3-phosphate phospholyase, putative		 embryo defective 1144 0.84 0.32 -0.3
5 AT1G72820 Mitochondrial substrate carrier family protein -0.82 0.33 -0.32
6 AT3G57090 Tetratricopeptide repeat (TPR)-like superfamily protein BIGYIN, FISSION 1A 0.79 0.32 -0.3
7 AT1G25370 Protein of unknown function (DUF1639) 0.78 0.3 -0.33
8 AT5G51830 pfkB-like carbohydrate kinase family protein 0.78 0.33 -0.33
9 AT1G16210 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1014 (InterPro:IPR010422); Has 16107
Blast hits to 8386 proteins in 1107 species: Archae - 26;
Bacteria - 3370; Metazoa - 4013; Fungi - 1516; Plants -
526; Viruses - 120; Other Eukaryotes - 6536 (source: NCBI
BLink).		 0.78 0.3 -0.3
10 AT3G08710 thioredoxin H-type 9 thioredoxin H-type 9, thioredoxin
H-type 9, THIOREDOXIN TYPE H 9		 0.78 0.31 -0.31
11 AT2G38610 RNA-binding KH domain-containing protein 0.77 0.3 -0.31
12 AT5G56100 glycine-rich protein / oleosin -0.76 0.29 -0.32
13 AT5G23540 Mov34/MPN/PAD-1 family protein 0.76 0.32 -0.32
14 AT5G26940 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 defective in pollen organelle DNA
degradation1		 0.76 0.31 -0.32
15 AT4G11600 glutathione peroxidase 6 glutathione peroxidase 6,
glutathione peroxidase 6, LSC803,
PHGPX		 0.76 0.3 -0.33
16 AT1G28120 CONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain
(InterPro:IPR003323), Ubiquitin thioesterase Otubain
(InterPro:IPR016615), Peptidase C65, otubain
(InterPro:IPR019400); Has 413 Blast hits to 411 proteins in
139 species: Archae - 0; Bacteria - 0; Metazoa - 184; Fungi
- 83; Plants - 88; Viruses - 0; Other Eukaryotes - 58
(source: NCBI BLink).		 0.75 0.32 -0.32
17 AT1G47250 20S proteasome alpha subunit F2 20S proteasome alpha subunit F2 0.75 0.31 -0.32
18 AT1G48750 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.75 0.31 -0.32
19 AT5G37600 glutamine synthase clone R1 ARABIDOPSIS GLUTAMINE SYNTHASE
1;1, ARABIDOPSIS THALIANA
GLUTAMINE SYNTHASE CLONE R1,
GLUTAMINE SYNTHASE 1;1, glutamine
synthase clone R1		 0.75 0.35 -0.31
20 AT3G49500 RNA-dependent RNA polymerase 6 RNA-dependent RNA polymerase 6,
SILENCING DEFECTIVE 1, SUPPRESSOR
OF GENE SILENCING 2		 -0.75 0.31 -0.3
21 AT2G07490 transposable element gene -0.75 0.32 -0.32
22 AT3G22845 emp24/gp25L/p24 family/GOLD family protein 0.75 0.31 -0.35
23 AT5G03340 ATPase, AAA-type, CDC48 protein 0.74 0.34 -0.33
24 AT1G59710 Protein of unknown function (DUF569) 0.74 0.3 -0.33
25 AT3G60450 Phosphoglycerate mutase family protein 0.74 0.3 -0.32
26 AT5G52200 phosphoprotein phosphatase inhibitors AtI-2, inhibitor-2 0.74 0.31 -0.3
27 AT5G53000 2A phosphatase associated protein of 46 kD 2A phosphatase associated protein
of 46 kD		 0.74 0.3 -0.33
28 AT3G03040 F-box/RNI-like superfamily protein -0.73 0.32 -0.33
29 AT1G64700 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 17 plant
structures; EXPRESSED DURING: 11 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G61920.1); Has 48 Blast hits to 47 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.73 0.32 -0.31
30 AT1G64520 regulatory particle non-ATPase 12A regulatory particle non-ATPase 12A 0.73 0.32 -0.3
31 AT3G51420 strictosidine synthase-like 4 STRICTOSIDINE SYNTHASE-LIKE 4,
strictosidine synthase-like 4		 -0.73 0.3 -0.3
32 AT4G23270 cysteine-rich RLK (RECEPTOR-like protein kinase) 19 cysteine-rich RLK (RECEPTOR-like
protein kinase) 19		 0.73 0.34 -0.31
33 AT1G66410 calmodulin 4 CALMODULIN 4, calmodulin 4 0.73 0.33 -0.32
34 AT1G43890 RAB GTPASE HOMOLOG B18 ARABIDOPSIS RAB GTPASE HOMOLOG C1,
ARABIDOPSIS RAB GTPASE HOMOLOG
B18, ARABIDOPSIS RAB GTPASE
HOMOLOG C1, RAB GTPASE HOMOLOG
B18, RAB GTPASE HOMOLOG 18-1, RAB
GTPASE HOMOLOG C1		 0.73 0.3 -0.31
35 AT5G49360 beta-xylosidase 1 BETA-XYLOSIDASE 1, beta-xylosidase
1		 -0.73 0.3 -0.32
36 AT3G09840 cell division cycle 48 ATCDC48, cell division cycle 48,
CDC48A		 0.72 0.3 -0.31
37 AT1G09100 26S proteasome AAA-ATPase subunit RPT5B 26S proteasome AAA-ATPase subunit
RPT5B		 0.72 0.31 -0.3
38 AT4G02390 poly(ADP-ribose) polymerase poly(ADP-ribose) polymerase,
ATPARP1, POLY(ADP-RIBOSE)
POLYMERASE 1, poly(ADP-ribose)
polymerase		 -0.72 0.33 -0.32
39 AT5G10190 Major facilitator superfamily protein 0.72 0.33 -0.29
40 AT5G01340 Mitochondrial substrate carrier family protein AtmSFC1, mitochondrial
succinate-fumarate carrier 1		 0.72 0.31 -0.29
41 AT2G37940 Arabidopsis Inositol phosphorylceramide synthase 2 Arabidopsis Inositol
phosphorylceramide synthase 2,
enhancing RPW8-mediated HR-like
cell death 1		 0.72 0.31 -0.34
42 AT3G48360 BTB and TAZ domain protein 2 ATBT2, BTB and TAZ domain protein
2		 -0.72 0.32 -0.32
43 AT1G68370 Chaperone DnaJ-domain superfamily protein ALTERED RESPONSE TO GRAVITY 1 0.72 0.31 -0.32
44 AT5G28050 Cytidine/deoxycytidylate deaminase family protein 0.72 0.31 -0.31
45 AT5G22060 DNAJ homologue 2 ARABIDOPSIS THALIANA DNAJ
HOMOLOGUE 2, DNAJ homologue 2		 0.72 0.32 -0.32
46 AT3G54110 plant uncoupling mitochondrial protein 1 ARABIDOPSIS THALIANA PLANT
UNCOUPLING MITOCHONDRIAL PROTEIN
1, ARABIDOPSIS THALIANA UNCOUPLING
PROTEIN 1, plant uncoupling
mitochondrial protein 1, UCP,
UNCOUPLING PROTEIN 1		 0.72 0.33 -0.32
47 AT1G21920 Histone H3 K4-specific methyltransferase SET7/9 family
protein		 -0.71 0.31 -0.31
48 AT3G22420 with no lysine (K) kinase 2 ARABIDOPSIS THALIANA WITH NO K 2,
with no lysine (K) kinase 2, ZIK3		 -0.71 0.3 -0.33
49 AT5G03230 Protein of unknown function, DUF584 -0.71 0.31 -0.3
50 AT5G54430 Adenine nucleotide alpha hydrolases-like superfamily
protein		 ATPHOS32, PHOS32 0.71 0.31 -0.32
51 AT2G20850 STRUBBELIG-receptor family 1 STRUBBELIG-receptor family 1 -0.71 0.32 -0.32
52 AT5G40470 RNI-like superfamily protein -0.7 0.32 -0.3
53 AT4G00570 NAD-dependent malic enzyme 2 NAD-dependent malic enzyme 2 0.7 0.31 -0.32
54 AT3G53260 phenylalanine ammonia-lyase 2 ATPAL2, phenylalanine
ammonia-lyase 2		 0.7 0.31 -0.3
55 AT4G04210 plant UBX domain containing protein 4 plant UBX domain containing
protein 4		 0.7 0.31 -0.33
56 AT2G03890 phosphoinositide 4-kinase gamma 7 phosphoinositide 4-kinase gamma 7,
phosphoinositide 4-kinase gamma 7,
UBIQUITIN-LIKE DOMAIN KINASE GAMMA
7		 -0.7 0.31 -0.29
57 AT5G42780 homeobox protein 27 homeobox protein 27, homeobox
protein 27, ZINC FINGER
HOMEODOMAIN 13		 -0.7 0.32 -0.33
58 AT1G47260 gamma carbonic anhydrase 2 APFI, gamma carbonic anhydrase 2 0.69 0.31 -0.32
59 AT1G21380 Target of Myb protein 1 0.69 0.32 -0.32
60 AT1G68110 ENTH/ANTH/VHS superfamily protein -0.69 0.31 -0.33
61 AT1G28680 HXXXD-type acyl-transferase family protein 0.69 0.32 -0.33
62 AT1G73670 MAP kinase 15 MAP kinase 15, MAP kinase 15 0.69 0.33 -0.3
63 AT5G36890 beta glucosidase 42 beta glucosidase 42 0.69 0.31 -0.3
64 AT4G33660 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.69 0.31 -0.32
65 AT5G40920 pseudogene, disease resistance protein (TIR-NBS-LRR class),
putative, domain signature TIR-NBS-LRR exists, suggestive
of a disease resistance protein.		 -0.69 0.34 -0.31
66 AT3G55600 Membrane fusion protein Use1 0.69 0.31 -0.3
67 AT5G20480 EF-TU receptor EF-TU receptor 0.69 0.32 -0.32
68 AT3G57190 peptide chain release factor, putative peptide chain release factor 3 -0.69 0.31 -0.34
69 AT4G01330 Protein kinase superfamily protein -0.69 0.3 -0.33
70 AT1G63640 P-loop nucleoside triphosphate hydrolases superfamily
protein with CH (Calponin Homology) domain		 -0.69 0.3 -0.32
71 AT3G58975 pseudogene of F-box family protein -0.68 0.32 -0.32
72 AT2G45700 sterile alpha motif (SAM) domain-containing protein -0.68 0.32 -0.32
73 AT3G49390 CTC-interacting domain 10 CTC-interacting domain 10 0.68 0.32 -0.31
74 AT2G29320 NAD(P)-binding Rossmann-fold superfamily protein -0.68 0.3 -0.33
75 AT4G08170 Inositol 1,3,4-trisphosphate 5/6-kinase family protein 0.68 0.31 -0.3
76 AT5G05750 DNAJ heat shock N-terminal domain-containing protein 0.68 0.32 -0.31
77 AT5G16320 FRIGIDA like 1 FRIGIDA like 1 0.68 0.31 -0.32
78 AT3G13520 arabinogalactan protein 12 arabinogalactan protein 12,
ATAGP12		 0.68 0.32 -0.3
79 AT3G15380 Plasma-membrane choline transporter family protein -0.68 0.32 -0.34
80 AT3G52740 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G44450.1); Has 65 Blast hits
to 65 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.68 0.33 -0.32
81 AT4G17310 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 9
plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage; BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT5G47455.7); Has 164 Blast hits to 164
proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.68 0.31 -0.32
82 AT1G23220 Dynein light chain type 1 family protein 0.68 0.31 -0.32
83 AT4G29960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 15 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.68 0.34 -0.32
84 AT1G18460 alpha/beta-Hydrolases superfamily protein -0.67 0.3 -0.29
85 AT3G23930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: hypocotyl; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G13540.1); Has 10639 Blast hits to 7432 proteins
in 646 species: Archae - 82; Bacteria - 826; Metazoa -
5047; Fungi - 759; Plants - 314; Viruses - 86; Other
Eukaryotes - 3525 (source: NCBI BLink).		 -0.67 0.32 -0.31
86 AT5G67420 LOB domain-containing protein 37 ASYMMETRIC LEAVES2-LIKE 39, LOB
domain-containing protein 37		 -0.67 0.31 -0.32
87 AT5G15170 tyrosyl-DNA phosphodiesterase-related tyrosyl-DNA phosphodiesterase 1 -0.67 0.32 -0.32
88 AT2G17970 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.67 0.3 -0.31
89 AT1G54120 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G14060.1); Has 23 Blast hits
to 23 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.67 0.31 -0.31
90 AT1G30550 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.66 0.29 -0.32
91 AT2G29300 NAD(P)-binding Rossmann-fold superfamily protein -0.66 0.3 -0.31
92 AT1G68740 EXS (ERD1/XPR1/SYG1) family protein PHO1;H1 -0.65 0.31 -0.32
93 AT4G27250 NAD(P)-binding Rossmann-fold superfamily protein -0.65 0.31 -0.33
94 AT1G54740 Protein of unknown function (DUF3049) -0.65 0.33 -0.36
95 AT1G80630 RNI-like superfamily protein -0.65 0.3 -0.34
96 AT3G19030 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: pyridoxine biosynthetic process, homoserine
biosynthetic process; LOCATED IN: endomembrane system;
EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9
growth stages; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G49500.1); Has 22 Blast hits to 22
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.64 0.29 -0.32
97 AT1G05600 Tetratricopeptide repeat (TPR)-like superfamily protein EMBRYO DEFECTIVE 3101 -0.64 0.29 -0.32
98 AT3G11280 Duplicated homeodomain-like superfamily protein -0.64 0.31 -0.3
99 AT1G50290 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.63 0.31 -0.32
100 AT3G59000 F-box/RNI-like superfamily protein -0.63 0.31 -0.3
101 AT5G56570 Leucine-rich repeat (LRR) family protein -0.63 0.31 -0.31
102 AT1G73970 unknown protein; Has 34 Blast hits to 33 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.63 0.3 -0.31
103 AT1G78320 glutathione S-transferase TAU 23 glutathione S-transferase TAU 23,
glutathione S-transferase TAU 23		 -0.63 0.31 -0.3
104 AT1G48310 chromatin remodeling factor18 CHA18, chromatin remodeling
factor18		 -0.62 0.31 -0.32
105 AT1G69720 heme oxygenase 3 heme oxygenase 3 -0.62 0.32 -0.33
106 AT1G75730 unknown protein; Has 327 Blast hits to 272 proteins in 89
species: Archae - 0; Bacteria - 129; Metazoa - 68; Fungi -
14; Plants - 20; Viruses - 0; Other Eukaryotes - 96
(source: NCBI BLink).		 -0.62 0.32 -0.31
107 AT1G11710 Pentatricopeptide repeat (PPR) superfamily protein -0.62 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
108 C0033 4-(Methylsulfinyl)butylglucosinolate - 4-Methylsulfinylbutyl glucosinolate glucosinolate biosynthesis from dihomomethionine 0.86 0.44 -0.46 C0033