AT4G28240 : -
Query Information
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AGICode AT4G28240
Description Wound-responsive family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G28240 Wound-responsive family protein 1 0.31 -0.31
2 AT3G07310 Protein of unknown function (DUF760) 0.83 0.31 -0.32
3 AT1G56220 Dormancy/auxin associated family protein 0.82 0.32 -0.31
4 AT3G10200 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.81 0.3 -0.32
5 AT1G18460 alpha/beta-Hydrolases superfamily protein 0.79 0.31 -0.3
6 AT5G60680 Protein of unknown function, DUF584 0.78 0.32 -0.32
7 AT5G47390 myb-like transcription factor family protein 0.77 0.32 -0.32
8 AT1G79460 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 ARABIDOPSIS THALIANA ENT-KAURENE
SYNTHASE, ARABIDOPSIS THALIANA
ENT-KAURENE SYNTHASE 1, GA
REQUIRING 2, KS, ENT-KAURENE
SYNTHASE 1		 0.75 0.29 -0.31
9 AT1G48300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 96 Blast hits to 87
proteins in 37 species: Archae - 0; Bacteria - 2; Metazoa -
12; Fungi - 2; Plants - 65; Viruses - 0; Other Eukaryotes -
15 (source: NCBI BLink).		 0.75 0.32 -0.31
10 AT5G49480 Ca2+-binding protein 1 Ca2+-binding protein 1,
Ca2+-binding protein 1		 -0.75 0.33 -0.31
11 AT4G13830 DNAJ-like 20 DNAJ-like 20 0.74 0.32 -0.32
12 AT2G20670 Protein of unknown function (DUF506) 0.74 0.31 -0.32
13 AT5G10550 global transcription factor group E2 global transcription factor group
E2		 0.74 0.3 -0.31
14 AT2G47700 RING/U-box superfamily protein RED AND FAR-RED INSENSITIVE 2 0.74 0.3 -0.31
15 AT1G68650 Uncharacterized protein family (UPF0016) -0.74 0.31 -0.32
16 AT3G23080 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.74 0.3 -0.3
17 AT1G06110 SKP1/ASK-interacting protein 16 SKP1/ASK-interacting protein 16 0.74 0.31 -0.29
18 AT5G56100 glycine-rich protein / oleosin 0.73 0.28 -0.32
19 AT1G66890 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
50S ribosomal protein-related (TAIR:AT5G16200.1); Has 36
Blast hits to 36 proteins in 7 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.73 0.31 -0.32
20 AT3G06330 RING/U-box superfamily protein 0.73 0.28 -0.32
21 AT4G38900 Basic-leucine zipper (bZIP) transcription factor family
protein		 0.73 0.33 -0.33
22 AT3G59940 Galactose oxidase/kelch repeat superfamily protein 0.73 0.32 -0.34
23 AT1G29240 Protein of unknown function (DUF688) 0.73 0.3 -0.31
24 AT3G26510 Octicosapeptide/Phox/Bem1p family protein 0.73 0.32 -0.32
25 AT5G30490 CONTAINS InterPro DOMAIN/s: Craniofacial development
protein 1/Bucentaur (InterPro:IPR011421); Has 333 Blast
hits to 324 proteins in 149 species: Archae - 0; Bacteria -
18; Metazoa - 117; Fungi - 96; Plants - 49; Viruses - 0;
Other Eukaryotes - 53 (source: NCBI BLink).		 -0.73 0.31 -0.3
26 AT3G25655 inflorescence deficient in abscission (IDA)-like 1 inflorescence deficient in
abscission (IDA)-like 1		 -0.72 0.32 -0.31
27 AT3G17950 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 10 growth stages; Has 63 Blast hits to 63 proteins
in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.72 0.33 -0.31
28 AT2G02860 sucrose transporter 2 ARABIDOPSIS THALIANA SUCROSE
TRANSPORTER 3, ATSUT2, SUCROSE
TRANSPORTER 3, sucrose transporter
2		 -0.71 0.34 -0.33
29 AT2G38820 Protein of unknown function (DUF506) 0.71 0.31 -0.31
30 AT1G55500 evolutionarily conserved C-terminal region 4 evolutionarily conserved
C-terminal region 4		 -0.71 0.34 -0.31
31 AT5G27540 MIRO-related GTP-ase 1 embryo defective 2473,
MIRO-related GTP-ase 1		 -0.71 0.32 -0.31
32 AT5G24490 30S ribosomal protein, putative 0.71 0.31 -0.33
33 AT4G12690 Plant protein of unknown function (DUF868) 0.71 0.3 -0.31
34 AT1G04810 26S proteasome regulatory complex, non-ATPase subcomplex,
Rpn2/Psmd1 subunit		 -0.7 0.32 -0.32
35 AT5G11460 Protein of unknown function (DUF581) 0.7 0.31 -0.31
36 AT1G25230 Calcineurin-like metallo-phosphoesterase superfamily
protein		 0.7 0.29 -0.33
37 AT1G55170 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G14750.1); Has 13439 Blast
hits to 8993 proteins in 828 species: Archae - 344;
Bacteria - 1469; Metazoa - 6958; Fungi - 1008; Plants -
683; Viruses - 29; Other Eukaryotes - 2948 (source: NCBI
BLink).		 -0.7 0.32 -0.31
38 AT5G59960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.7 0.29 -0.3
39 AT2G17280 Phosphoglycerate mutase family protein -0.69 0.31 -0.31
40 AT4G01660 ABC transporter 1 ABC transporter 1, ABC transporter
1, ATATH10		 -0.69 0.31 -0.33
41 AT4G24800 MA3 domain-containing protein EIN2 C-terminus Interacting
Protein 1		 0.69 0.3 -0.3
42 AT1G07030 Mitochondrial substrate carrier family protein -0.69 0.32 -0.31
43 AT5G22920 CHY-type/CTCHY-type/RING-type Zinc finger protein 0.69 0.33 -0.31
44 AT5G07250 RHOMBOID-like protein 3 RHOMBOID-like protein 3,
RHOMBOID-like protein 3		 0.69 0.32 -0.31
45 AT2G33210 heat shock protein 60-2 heat shock protein 60-2 -0.69 0.32 -0.32
46 AT3G24530 AAA-type ATPase family protein / ankyrin repeat family
protein		 -0.69 0.33 -0.3
47 AT5G23840 MD-2-related lipid recognition domain-containing protein -0.69 0.34 -0.31
48 AT3G09405 Pectinacetylesterase family protein -0.68 0.31 -0.3
49 AT3G01350 Major facilitator superfamily protein 0.68 0.33 -0.33
50 AT4G16480 inositol transporter 4 ATINT4, inositol transporter 4 0.68 0.31 -0.31
51 AT3G47000 Glycosyl hydrolase family protein 0.68 0.34 -0.32
52 AT5G26860 lon protease 1 lon protease 1, LON_ARA_ARA -0.68 0.33 -0.33
53 AT5G09420 translocon at the outer membrane of chloroplasts 64-V AtmtOM64, translocon at the outer
membrane of chloroplasts 64-V,
ARABIDOPSIS THALIANA TRANSLOCON AT
THE OUTER MEMBRANE OF CHLOROPLASTS
64-V, outer membrane 64,
translocon at the outer membrane
of chloroplasts 64-V		 -0.68 0.31 -0.33
54 AT3G55620 Translation initiation factor IF6 eukaryotic initiation facor 6A,
embryo defective 1624		 -0.68 0.32 -0.29
55 AT2G41730 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G24640.1); Has 25 Blast hits
to 25 proteins in 5 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.68 0.31 -0.34
56 AT4G01330 Protein kinase superfamily protein 0.68 0.32 -0.31
57 AT1G08570 atypical CYS HIS rich thioredoxin 4 atypical CYS HIS rich thioredoxin
4		 0.67 0.29 -0.31
58 AT2G25900 Zinc finger C-x8-C-x5-C-x3-H type family protein ATCTH, A. THALIANA TANDEM ZINC
FINGER PROTEIN 1		 0.67 0.31 -0.33
59 AT1G80630 RNI-like superfamily protein 0.67 0.32 -0.31
60 AT5G15640 Mitochondrial substrate carrier family protein -0.67 0.32 -0.31
61 AT5G63190 MA3 domain-containing protein 0.67 0.32 -0.32
62 AT4G24120 YELLOW STRIPE like 1 YELLOW STRIPE LIKE 1, YELLOW
STRIPE like 1		 -0.67 0.32 -0.31
63 AT2G17450 RING-H2 finger A3A RING-H2 finger A3A 0.67 0.33 -0.3
64 AT5G18400 Cytokine-induced anti-apoptosis inhibitor 1, Fe-S
biogenesis		 -0.67 0.34 -0.31
65 AT4G37910 mitochondrial heat shock protein 70-1 mitochondrial heat shock protein
70-1		 -0.67 0.32 -0.32
66 AT4G21480 sugar transporter protein 12 sugar transporter protein 12 0.67 0.33 -0.3
67 AT5G22060 DNAJ homologue 2 ARABIDOPSIS THALIANA DNAJ
HOMOLOGUE 2, DNAJ homologue 2		 -0.67 0.32 -0.31
68 AT5G55920 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 OLIGOCELLULA 2 -0.67 0.34 -0.33
69 AT1G17690 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: nucleus; EXPRESSED
IN: 24 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Digestive organ
expansion factor, predicted (InterPro:IPR010678); Has 25006
Blast hits to 13379 proteins in 904 species: Archae - 102;
Bacteria - 5571; Metazoa - 7448; Fungi - 3168; Plants -
1056; Viruses - 466; Other Eukaryotes - 7195 (source: NCBI
BLink).		 nucleolar factor 1 -0.66 0.32 -0.31
70 AT5G01340 Mitochondrial substrate carrier family protein AtmSFC1, mitochondrial
succinate-fumarate carrier 1		 -0.66 0.31 -0.31
71 AT1G16740 Ribosomal protein L20 -0.66 0.3 -0.32
72 AT3G01040 galacturonosyltransferase 13 galacturonosyltransferase 13 -0.66 0.31 -0.3
73 AT1G23390 Kelch repeat-containing F-box family protein 0.66 0.3 -0.3
74 AT1G73920 alpha/beta-Hydrolases superfamily protein 0.66 0.31 -0.31
75 AT2G26070 Protein of unknown function (DUF778) REVERSION-TO-ETHYLENE SENSITIVITY1 0.66 0.32 -0.32
76 AT5G03180 RING/U-box superfamily protein 0.66 0.35 -0.3
77 AT4G01026 PYR1-like 7 PYR1-like 7, regulatory components
of ABA receptor 2		 0.66 0.32 -0.33
78 AT1G48970 NagB/RpiA/CoA transferase-like superfamily protein -0.66 0.31 -0.3
79 AT4G00560 NAD(P)-binding Rossmann-fold superfamily protein 0.65 0.32 -0.32
80 AT2G35720 DNAJ heat shock N-terminal domain-containing protein ORIENTATION UNDER VERY LOW
FLUENCES OF LIGHT 1		 -0.65 0.32 -0.29
81 AT5G51080 RNase H family protein 0.65 0.32 -0.33
82 AT4G04210 plant UBX domain containing protein 4 plant UBX domain containing
protein 4		 -0.65 0.31 -0.34
83 AT4G21650 Subtilase family protein 0.65 0.32 -0.32
84 AT2G32250 FAR1-related sequence 2 FAR1-related sequence 2 -0.65 0.3 -0.29
85 AT1G64470 Ubiquitin-like superfamily protein 0.65 0.3 -0.33
86 AT1G09520 LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 12 growth stages; CONTAINS InterPro
DOMAIN/s: Zinc finger, PHD-type, conserved site
(InterPro:IPR019786); BEST Arabidopsis thaliana protein
match is: PHD finger family protein (TAIR:AT3G17460.1); Has
56 Blast hits to 56 proteins in 17 species: Archae - 0;
Bacteria - 2; Metazoa - 0; Fungi - 4; Plants - 46; Viruses
- 0; Other Eukaryotes - 4 (source: NCBI BLink).		 0.65 0.31 -0.32
87 AT3G10380 subunit of exocyst complex 8 SUBUNIT OF EXOCYST COMPLEX 8,
subunit of exocyst complex 8		 -0.65 0.31 -0.33
88 AT1G41797 transposable element gene 0.65 0.31 -0.32
89 AT3G56270 Plant protein of unknown function (DUF827) 0.64 0.34 -0.32
90 AT1G74750 Pentatricopeptide repeat (PPR) superfamily protein -0.64 0.31 -0.32
91 AT3G57660 nuclear RNA polymerase A1 nuclear RNA polymerase A1 -0.64 0.34 -0.32
92 AT5G40530 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.64 0.34 -0.3
93 AT4G25780 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 0.64 0.33 -0.34
94 AT2G38290 ammonium transporter 2 ammonium transporter 2, AMMONIUM
TRANSPORTER 2;1, ammonium
transporter 2		 -0.64 0.31 -0.32
95 AT2G06210 binding EARLY FLOWERING 8, VERNALIZATION
INDEPENDENCE 6		 -0.64 0.33 -0.3
96 AT4G05070 Wound-responsive family protein 0.64 0.32 -0.3
97 AT3G26740 CCR-like CCR-like 0.64 0.33 -0.31
98 AT1G78570 rhamnose biosynthesis 1 ARABIDOPSIS THALIANA RHAMNOSE
BIOSYNTHESIS 1, rhamnose
biosynthesis 1, REPRESSOR OF LRX1
1		 -0.64 0.34 -0.31
99 AT5G25280 serine-rich protein-related 0.64 0.33 -0.32
100 AT1G71980 Protease-associated (PA) RING/U-box zinc finger family
protein		 0.63 0.32 -0.32
101 AT4G04860 DERLIN-2.2 DERLIN-2.2 -0.63 0.31 -0.32
102 AT3G52450 plant U-box 22 plant U-box 22 -0.63 0.31 -0.35
103 AT5G17270 Protein prenylyltransferase superfamily protein -0.63 0.29 -0.33
104 AT4G24920 secE/sec61-gamma protein transport protein -0.63 0.33 -0.29
105 AT2G18420 Gibberellin-regulated family protein -0.63 0.34 -0.33
106 AT5G23480 SWIB/MDM2 domain;Plus-3;GYF -0.63 0.32 -0.32
107 AT1G03520 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 0.63 0.3 -0.32
108 AT4G24130 Protein of unknown function, DUF538 -0.63 0.31 -0.32
109 AT1G49830 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.62 0.34 -0.32
110 AT5G13390 no exine formation 1 NO EXINE FORMATION 1 -0.62 0.33 -0.35
111 AT3G10050 L-O-methylthreonine resistant 1 L-O-methylthreonine resistant 1 -0.62 0.31 -0.32
112 AT4G35060 Heavy metal transport/detoxification superfamily protein heavy metal associated
isoprenylated plant protein 25		 -0.62 0.32 -0.32
113 AT5G42190 E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family
protein		 Arabidopsis SKP-like 2, SKP1B 0.62 0.32 -0.32
114 AT2G46550 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G01240.3); Has 72 Blast hits
to 68 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 1; Fungi - 0; Plants - 71; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.62 0.3 -0.3
115 AT5G02020 Encodes a protein involved in salt tolerance, names SIS
(Salt Induced Serine rich).		 Salt Induced Serine rich 0.62 0.33 -0.32
116 AT1G61370 S-locus lectin protein kinase family protein -0.62 0.28 -0.3
117 AT1G24450 Ribonuclease III family protein NUCLEAR FUSION DEFECTIVE 2 0.62 0.32 -0.32
118 AT5G66110 Heavy metal transport/detoxification superfamily protein heavy metal associated
isoprenylated plant protein 27		 0.62 0.33 -0.32
119 AT3G47640 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 POPEYE 0.62 0.3 -0.31
120 AT3G26980 membrane-anchored ubiquitin-fold protein 4 precursor membrane-anchored ubiquitin-fold
protein 4 precursor		 -0.62 0.31 -0.32
121 AT5G15700 DNA/RNA polymerases superfamily protein -0.61 0.32 -0.31
122 AT4G15010 Mitochondrial substrate carrier family protein -0.61 0.3 -0.3
123 AT1G04945 HIT-type Zinc finger family protein -0.61 0.32 -0.33
124 AT5G02780 glutathione transferase lambda 1 glutathione transferase lambda 1 -0.61 0.32 -0.31
125 AT3G23990 heat shock protein 60 heat shock protein 60, HEAT SHOCK
PROTEIN 60-3B		 -0.61 0.32 -0.31
126 AT4G00570 NAD-dependent malic enzyme 2 NAD-dependent malic enzyme 2 -0.6 0.31 -0.3
127 AT1G07890 ascorbate peroxidase 1 ascorbate peroxidase 1, ATAPX01,
ATAPX1, CS1, maternal effect
embryo arrest 6		 -0.6 0.29 -0.3
128 AT4G12750 Homeodomain-like transcriptional regulator -0.6 0.31 -0.3
129 AT3G44460 Basic-leucine zipper (bZIP) transcription factor family
protein		 basic leucine zipper transcription
factor 67, DPBF2		 -0.6 0.34 -0.32
130 AT1G50140 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.6 0.31 -0.31
131 AT1G25520 Uncharacterized protein family (UPF0016) -0.6 0.33 -0.3
132 AT5G44570 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: leaf whorl, hypocotyl,
sepal, flower, leaf; EXPRESSED DURING: petal
differentiation and expansion stage, LP.08 eight leaves
visible; Has 7 Blast hits to 7 proteins in 2 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.6 0.32 -0.32
133 AT1G72560 ARM repeat superfamily protein PAUSED -0.6 0.32 -0.29
134 AT5G09380 RNA polymerase III RPC4 -0.6 0.31 -0.32
135 AT5G56460 Protein kinase superfamily protein -0.6 0.31 -0.32
136 AT2G04070 MATE efflux family protein -0.6 0.33 -0.31
137 AT4G23260 cysteine-rich RLK (RECEPTOR-like protein kinase) 18 cysteine-rich RLK (RECEPTOR-like
protein kinase) 18		 -0.6 0.31 -0.32
138 AT3G09440 Heat shock protein 70 (Hsp 70) family protein -0.6 0.34 -0.33
139 AT1G06470 Nucleotide/sugar transporter family protein -0.6 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
140 C0226 Raffinose pentahydrate D-(+)-Raffinose pentahydrate - galactolipid biosynthesis suppression,
polysaccharide biosynthesis 		-0.63 0.3 -0.33