AT4G28010 : -
Query Information
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AGICode AT4G28010
Description Tetratricopeptide repeat (TPR)-like superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G28010 Tetratricopeptide repeat (TPR)-like superfamily protein 1 0.32 -0.32
2 AT5G49620 myb domain protein 78 myb domain protein 78, myb domain
protein 78		 -0.7 0.31 -0.31
3 AT5G16880 Target of Myb protein 1 -0.69 0.32 -0.32
4 AT2G12300 transposable element gene 0.68 0.3 -0.32
5 AT1G22130 AGAMOUS-like 104 AGAMOUS-like 104 -0.66 0.32 -0.34
6 AT4G10330 glycine-rich protein -0.65 0.31 -0.31
7 AT3G45000 SNF7 family protein VPS24, VPS24.2 0.64 0.31 -0.32
8 AT1G63070 pentatricopeptide (PPR) repeat-containing protein -0.62 0.33 -0.31
9 AT1G72180 Leucine-rich receptor-like protein kinase family protein -0.61 0.3 -0.31
10 ATMG00110 cytochrome C biogenesis 206 ATP-binding cassette I2,
cytochrome C biogenesis 206		 -0.61 0.33 -0.32
11 AT1G17730 vacuolar protein sorting 46.1 CHARGED MULTIVESICULAR BODY
PROTEIN/CHROMATIN MODIFYING
PROTEIN1B, vacuolar protein
sorting 46.1		 -0.61 0.33 -0.31
12 AT1G36980 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0220
(InterPro:IPR007919); Has 424 Blast hits to 424 proteins in
159 species: Archae - 0; Bacteria - 0; Metazoa - 228; Fungi
- 120; Plants - 62; Viruses - 0; Other Eukaryotes - 14
(source: NCBI BLink).		 -0.61 0.32 -0.34
13 AT4G01400 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: COG4
transport (InterPro:IPR013167), Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 26268 Blast hits to 8959
proteins in 289 species: Archae - 0; Bacteria - 3; Metazoa
- 247; Fungi - 222; Plants - 25350; Viruses - 0; Other
Eukaryotes - 446 (source: NCBI BLink).		 -0.6 0.3 -0.32
14 AT5G38950 RmlC-like cupins superfamily protein 0.6 0.31 -0.31
15 AT1G47765 F-box and associated interaction domains-containing protein -0.59 0.33 -0.33
16 AT1G28030 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.59 0.3 -0.32
17 AT3G54720 Peptidase M28 family protein ALTERED MERISTEM PROGRAM 1,
CONSTITUTIVE MORPHOGENESIS 2,
HAUPTLING, Multifolia, PRIMORDIA
TIMING		 0.59 0.32 -0.31
18 AT5G22555 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.58 0.31 -0.33
19 AT5G42750 BRI1 kinase inhibitor 1 BRI1 kinase inhibitor 1 -0.58 0.33 -0.32
20 AT2G32630 Pentatricopeptide repeat (PPR-like) superfamily protein 0.58 0.3 -0.32
21 AT2G33230 YUCCA 7 YUCCA 7 -0.58 0.33 -0.31
22 AT5G43320 casein kinase I-like 8 casein kinase I-like 8 -0.58 0.32 -0.31
23 AT1G50090 D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily protein		 -0.57 0.31 -0.31
24 AT2G11190 transposable element gene -0.57 0.32 -0.3
25 AT5G65910 BSD domain-containing protein -0.57 0.31 -0.33
26 AT1G26710 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G26720.1); Has 9 Blast hits to
9 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.57 0.32 -0.33
27 ATMG00150 hypothetical protein ORF116 -0.57 0.29 -0.33
28 AT3G50400 GDSL-like Lipase/Acylhydrolase superfamily protein 0.57 0.3 -0.32
29 AT5G02920 F-box/RNI-like superfamily protein 0.57 0.31 -0.29
30 AT4G16680 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.57 0.33 -0.3
31 AT2G47020 Peptide chain release factor 1 0.56 0.3 -0.33
32 AT2G10630 transposable element gene -0.56 0.31 -0.33
33 AT5G09920 RNA polymerase II, Rpb4, core protein ATRPB15.9, NRPB4, RPB15.9,
RPB15.9.9		 -0.56 0.32 -0.32
34 AT2G17430 Seven transmembrane MLO family protein ATMLO7, MILDEW RESISTANCE LOCUS O
7, NORTIA		 0.56 0.32 -0.32
35 AT5G55250 IAA carboxylmethyltransferase 1 AtIAMT1, IAA
carboxylmethyltransferase 1		 0.56 0.3 -0.32
36 AT3G17340 ARM repeat superfamily protein 0.56 0.32 -0.3
37 AT1G01980 FAD-binding Berberine family protein 0.55 0.32 -0.32
38 AT2G19310 HSP20-like chaperones superfamily protein -0.55 0.3 -0.33
39 AT3G27310 plant UBX domain-containing protein 1 plant UBX domain-containing
protein 1		 -0.55 0.33 -0.31
40 AT1G28650 GDSL-like Lipase/Acylhydrolase superfamily protein 0.55 0.32 -0.33
41 AT5G60310 Concanavalin A-like lectin protein kinase family protein 0.55 0.29 -0.33
42 AT1G60430 actin-related protein C3 actin-related protein C3 -0.55 0.31 -0.31
43 AT4G21780 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.55 0.31 -0.32
44 AT2G20740 Tetraspanin family protein -0.55 0.33 -0.31
45 AT1G49960 Xanthine/uracil permease family protein 0.55 0.32 -0.31
46 AT1G25270 nodulin MtN21 /EamA-like transporter family protein 0.55 0.31 -0.32
47 AT4G26680 Tetratricopeptide repeat (TPR)-like superfamily protein 0.54 0.31 -0.32
48 AT3G11690 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G06380.1); Has 84 Blast
hits to 84 proteins in 12 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.54 0.3 -0.31
49 ATMG00840 hypothetical protein ORF121B -0.54 0.3 -0.31
50 AT3G26790 AP2/B3-like transcriptional factor family protein FUSCA 3 -0.54 0.28 -0.32
51 AT2G47440 Tetratricopeptide repeat (TPR)-like superfamily protein -0.53 0.34 -0.3
52 AT3G60110 DNA-binding bromodomain-containing protein -0.53 0.33 -0.32
53 AT1G75910 extracellular lipase 4 extracellular lipase 4 0.53 0.33 -0.31
54 AT4G31940 cytochrome P450, family 82, subfamily C, polypeptide 4 cytochrome P450, family 82,
subfamily C, polypeptide 4		 0.53 0.29 -0.34
55 AT3G56960 phosphatidyl inositol monophosphate 5 kinase 4 phosphatidyl inositol
monophosphate 5 kinase 4		 0.51 0.31 -0.3
56 AT5G27230 Frigida-like protein 0.51 0.31 -0.31
57 AT4G37770 1-amino-cyclopropane-1-carboxylate synthase 8 1-amino-cyclopropane-1-carboxylate
synthase 8		 0.51 0.31 -0.31
58 AT3G02010 Pentatricopeptide repeat (PPR) superfamily protein 0.5 0.32 -0.31
59 AT5G07190 seed gene 3 seed gene 3 0.5 0.32 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
60 C0221 Quercetin-3-(2''-O-α-rhamnosyl)-O-β-glucosyl-7-O-α-rhamnoside Quercetin-3-(2''-O-α-L-rhamnosyl)-O-β-D-glucosyl-7-O-α-L-rhamnoside - quercetin glucoside biosynthesis (Arabidopsis) 0.63 0.42 -0.43