AT4G25700 : B1
Query Information
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AGICode AT4G25700
Description beta-hydroxylase 1
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G25700 beta-hydroxylase 1 B1, BETA CAROTENOID HYDROXYLASE 1,
beta-hydroxylase 1, chy1		 1 0.31 -0.33
2 AT1G76930 extensin 4 EXTENSIN 1, extensin 4, extensin
1, extensin 4, OBP3-RESPONSIVE
GENE 5		 -0.78 0.32 -0.28
3 AT4G29670 atypical CYS HIS rich thioredoxin 2 atypical CYS HIS rich thioredoxin
2		 0.77 0.31 -0.32
4 AT4G20380 LSD1 zinc finger family protein LESION SIMULATING DISEASE 0.75 0.33 -0.32
5 AT5G19855 Chaperonin-like RbcX protein AtRbcX2, homologue of
cyanobacterial RbcX 2		 0.75 0.31 -0.31
6 AT5G19070 SNARE associated Golgi protein family 0.75 0.32 -0.29
7 AT2G39080 NAD(P)-binding Rossmann-fold superfamily protein EMBRYO DEFECTIVE 2799 0.73 0.32 -0.31
8 AT2G20270 Thioredoxin superfamily protein 0.73 0.31 -0.32
9 AT5G13740 zinc induced facilitator 1 zinc induced facilitator 1 0.72 0.31 -0.31
10 AT4G25170 Uncharacterised conserved protein (UCP012943) 0.72 0.32 -0.31
11 AT2G26540 uroporphyrinogen-III synthase family protein DOMAIN OF UNKNOWN FUNCTION 724 3,
ARABIDOPSIS THALIANA
UROPORPHYRINOGEN III SYNTHASE,
DOMAIN OF UNKNOWN FUNCTION 724 3,
HEMD, UROPORPHYRINOGEN III
SYNTHASE		 0.72 0.29 -0.32
12 AT3G62820 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.72 0.31 -0.31
13 AT2G26670 Plant haem oxygenase (decyclizing) family protein ARABIDOPSIS THALIANA HEME
OXYGENASE 1, GENOMES UNCOUPLED 2,
HEME OXYGENASE 1, HEME OXYGENASE
1, HEME OXYGENASE 6, REVERSAL OF
THE DET PHENOTYPE 4		 0.71 0.33 -0.33
14 AT3G02290 RING/U-box superfamily protein 0.71 0.3 -0.3
15 AT3G09150 phytochromobilin:ferredoxin oxidoreductase, chloroplast /
phytochromobilin synthase (HY2)		 ARABIDOPSIS ELONGATED HYPOCOTYL 2,
GENOMES UNCOUPLED 3, ELONGATED
HYPOCOTYL 2		 0.71 0.33 -0.3
16 AT2G43750 O-acetylserine (thiol) lyase B ARABIDOPSIS CYSTEINE SYNTHASE 1,
ARABIDOPSIS THALIANA CYSTEIN
SYNTHASE-B, CHLOROPLAST
O-ACETYLSERINE SULFHYDRYLASE 1,
O-acetylserine (thiol) lyase B		 0.71 0.32 -0.32
17 AT1G52510 alpha/beta-Hydrolases superfamily protein 0.71 0.33 -0.29
18 AT4G33520 P-type ATP-ase 1 Arabidopsis thaliana heavy metal
ATPase 6, HEAVY METAL ATPASE 6,
P-type ATP-ase 1		 0.7 0.32 -0.3
19 AT1G09250 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.7 0.32 -0.3
20 AT3G02900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G16660.1); Has 80 Blast
hits to 80 proteins in 21 species: Archae - 0; Bacteria -
4; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.7 0.32 -0.3
21 AT3G18290 zinc finger protein-related BRUTUS, embryo defective 2454 0.7 0.3 -0.33
22 AT2G39080 NAD(P)-binding Rossmann-fold superfamily protein EMBRYO DEFECTIVE 2799 0.7 0.31 -0.33
23 AT4G11980 nudix hydrolase homolog 14 ARABIDOPSIS THALIANA NUDIX
HYDROLASE HOMOLOG 14, nudix
hydrolase homolog 14, nudix
hydrolase homolog 14		 0.69 0.3 -0.31
24 AT5G03440 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G54880.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.69 0.31 -0.3
25 AT3G14280 unknown protein; Has 51 Blast hits to 51 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.69 0.31 -0.32
26 AT4G32870 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.69 0.32 -0.31
27 AT3G52230 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast outer membrane, chloroplast thylakoid membrane,
chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; Has 29
Blast hits to 29 proteins in 12 species: Archae - 0;
Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 26; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.69 0.31 -0.32
28 AT2G30170 Protein phosphatase 2C family protein 0.69 0.32 -0.33
29 AT1G64980 Nucleotide-diphospho-sugar transferases superfamily protein 0.69 0.3 -0.34
30 AT4G14910 HISTIDINE BIOSYNTHESIS 5B HISTIDINE BIOSYNTHESIS 5B 0.68 0.32 -0.32
31 AT5G43780 Pseudouridine synthase/archaeosine transglycosylase-like
family protein		 APS4 -0.68 0.32 -0.31
32 AT2G46580 Pyridoxamine 5'-phosphate oxidase family protein 0.68 0.32 -0.32
33 AT5G41480 Folylpolyglutamate synthetase family protein A. THALIANA DHFS-FPGS HOMOLOG A,
DHFS-FPGS HOMOLOG A, EMBRYO
DEFECTIVE 9, GLOBULAR ARREST1		 0.68 0.32 -0.32
34 AT4G33460 ABC transporter family protein ATP-binding cassette I10, ATNAP13,
embryo defective 2751		 0.67 0.33 -0.31
35 AT1G33960 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 AVRRPT2-INDUCED GENE 1 -0.67 0.32 -0.32
36 AT4G01440 nodulin MtN21 /EamA-like transporter family protein -0.67 0.32 -0.31
37 AT5G18650 CHY-type/CTCHY-type/RING-type Zinc finger protein 0.67 0.3 -0.32
38 AT5G03415 Transcription factor DP ATDPB, DPB 0.67 0.33 -0.31
39 AT3G17770 Dihydroxyacetone kinase 0.67 0.32 -0.31
40 AT3G01850 Aldolase-type TIM barrel family protein 0.67 0.3 -0.32
41 AT4G20070 allantoate amidohydrolase allantoate amidohydrolase,
allantoate amidohydrolase		 0.67 0.29 -0.32
42 AT3G20060 ubiquitin-conjugating enzyme19 ubiquitin-conjugating enzyme19 0.66 0.33 -0.33
43 AT1G14780 MAC/Perforin domain-containing protein -0.66 0.32 -0.31
44 AT3G56980 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 BHLH039, OBP3-RESPONSIVE GENE 3 0.66 0.3 -0.32
45 AT5G60600 4-hydroxy-3-methylbut-2-enyl diphosphate synthase CHLOROPLAST BIOGENESIS 4,
CONSTITUTIVE SUBTILISIN 3, GCPE,
4-hydroxy-3-methylbut-2-enyl
diphosphate synthase, ISPG		 0.66 0.3 -0.34
46 AT3G57260 beta-1,3-glucanase 2 AtPR2, BETA-1,3-GLUCANASE 2,
beta-1,3-glucanase 2,
PATHOGENESIS-RELATED PROTEIN 2,
PATHOGENESIS-RELATED PROTEIN 2		 -0.66 0.31 -0.33
47 AT3G03860 APR-like 5 APR-like 5, APR-like 5 0.65 0.32 -0.33
48 AT5G57850 D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily protein		 0.65 0.31 -0.32
49 AT2G42670 Protein of unknown function (DUF1637) 0.64 0.33 -0.33
50 AT5G42960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, chloroplast, plastid, chloroplast envelope;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G45170.1); Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 0.64 0.3 -0.33
51 AT1G75340 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.64 0.31 -0.33
52 AT5G08460 GDSL-like Lipase/Acylhydrolase superfamily protein 0.64 0.33 -0.32
53 AT1G59750 auxin response factor 1 auxin response factor 1 0.64 0.31 -0.29
54 AT1G55300 TBP-associated factor 7 TBP-associated factor 7 0.64 0.32 -0.32
55 AT1G57590 Pectinacetylesterase family protein -0.64 0.32 -0.32
56 AT5G64920 COP1-interacting protein 8 COP1-interacting protein 8 0.64 0.31 -0.3
57 AT5G10760 Eukaryotic aspartyl protease family protein -0.64 0.32 -0.32
58 AT3G58680 multiprotein bridging factor 1B MULTIPROTEIN BRIDGING FACTOR 1B,
multiprotein bridging factor 1B		 0.64 0.29 -0.31
59 AT5G41340 ubiquitin conjugating enzyme 4 UBIQUITIN CONJUGATING ENZYME 4,
ubiquitin conjugating enzyme 4		 0.64 0.33 -0.32
60 AT2G26480 UDP-glucosyl transferase 76D1 UDP-glucosyl transferase 76D1 -0.63 0.31 -0.31
61 AT5G15240 Transmembrane amino acid transporter family protein 0.63 0.32 -0.32
62 AT4G24730 Calcineurin-like metallo-phosphoesterase superfamily
protein		 0.63 0.3 -0.31
63 AT5G20060 alpha/beta-Hydrolases superfamily protein 0.63 0.32 -0.31
64 AT1G12030 Protein of unknown function (DUF506) 0.63 0.33 -0.31
65 AT5G16290 VALINE-TOLERANT 1 VALINE-TOLERANT 1 0.63 0.29 -0.33
66 AT3G43670 Copper amine oxidase family protein -0.63 0.32 -0.3
67 AT1G06060 LisH and RanBPM domains containing protein 0.63 0.34 -0.31
68 AT1G60430 actin-related protein C3 actin-related protein C3 0.63 0.33 -0.3
69 AT3G55150 exocyst subunit exo70 family protein H1 exocyst subunit exo70 family
protein H1, exocyst subunit exo70
family protein H1		 -0.63 0.32 -0.32
70 AT5G47400 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.63 0.32 -0.31
71 AT5G06580 FAD-linked oxidases family protein 0.63 0.33 -0.31
72 AT2G28890 poltergeist like 4 poltergeist like 4 -0.63 0.31 -0.3
73 AT1G34750 Protein phosphatase 2C family protein -0.63 0.32 -0.31
74 AT3G57240 beta-1,3-glucanase 3 beta-1,3-glucanase 3 -0.62 0.32 -0.33
75 AT3G11530 Vacuolar protein sorting 55 (VPS55) family protein 0.62 0.33 -0.33
76 AT2G46735 unknown protein; Has 14 Blast hits to 14 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.62 0.3 -0.31
77 AT5G65710 HAESA-like 2 HAESA-like 2 -0.62 0.31 -0.3
78 AT1G54680 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G27290.1); Has 200 Blast hits to 200 proteins in
57 species: Archae - 0; Bacteria - 59; Metazoa - 0; Fungi -
0; Plants - 127; Viruses - 0; Other Eukaryotes - 14
(source: NCBI BLink).		 0.62 0.31 -0.31
79 AT3G54860 Sec1/munc18-like (SM) proteins superfamily ATVPS33, VACUOLAR PROTEIN SORTING
33		 0.62 0.31 -0.33
80 AT1G23210 glycosyl hydrolase 9B6 glycosyl hydrolase 9B6, glycosyl
hydrolase 9B6		 -0.62 0.32 -0.33
81 AT2G40900 nodulin MtN21 /EamA-like transporter family protein -0.61 0.32 -0.31
82 AT1G01070 nodulin MtN21 /EamA-like transporter family protein -0.61 0.29 -0.3
83 AT3G26870 Plant self-incompatibility protein S1 family -0.61 0.32 -0.31
84 AT1G56010 NAC domain containing protein 1 Arabidopsis NAC domain containing
protein 21, Arabidopsis NAC domain
containing protein 22, NAC domain
containing protein 1		 -0.6 0.3 -0.33
85 AT3G28540 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.6 0.31 -0.31
86 AT3G15720 Pectin lyase-like superfamily protein -0.58 0.32 -0.33
87 AT1G67760 TCP-1/cpn60 chaperonin family protein -0.57 0.35 -0.32
88 AT5G22380 NAC domain containing protein 90 NAC domain containing protein 90,
NAC domain containing protein 90		 -0.57 0.29 -0.31
89 AT3G50190 Plant protein of unknown function (DUF247) -0.56 0.29 -0.3
90 AT5G10380 RING/U-box superfamily protein ATRING1, RING1 -0.56 0.31 -0.31
91 AT1G75760 ER lumen protein retaining receptor family protein -0.55 0.34 -0.31
92 AT5G53110 RING/U-box superfamily protein -0.55 0.31 -0.3
93 AT2G34100 unknown protein; Has 35333 Blast hits to 34131 proteins in
2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink).		 -0.55 0.31 -0.31
94 AT5G40780 lysine histidine transporter 1 lysine histidine transporter 1 -0.55 0.3 -0.32
95 AT1G02980 cullin 2 ATCUL2, cullin 2 -0.54 0.32 -0.32
96 AT3G25640 Protein of unknown function, DUF617 -0.54 0.32 -0.32
97 AT1G05490 chromatin remodeling 31 chromatin remodeling 31 -0.54 0.29 -0.31
98 AT3G61820 Eukaryotic aspartyl protease family protein -0.54 0.31 -0.32
99 AT4G35700 zinc finger (C2H2 type) family protein DUO1-activated zinc finger 3 -0.53 0.33 -0.32
100 AT5G14940 Major facilitator superfamily protein -0.53 0.32 -0.32
101 AT1G16510 SAUR-like auxin-responsive protein family -0.53 0.29 -0.31
102 AT2G02680 Cysteine/Histidine-rich C1 domain family protein -0.53 0.32 -0.31
103 AT5G51930 Glucose-methanol-choline (GMC) oxidoreductase family
protein		 -0.53 0.31 -0.35
104 AT4G22400 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G18320.2); Has 44 Blast hits
to 44 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.52 0.34 -0.33
105 AT1G69180 Plant-specific transcription factor YABBY family protein CRABS CLAW -0.52 0.32 -0.33
106 AT5G53370 pectin methylesterase PCR fragment F PECTIN METHYLESTERASE PCR FRAGMENT
F, pectin methylesterase PCR
fragment F		 -0.52 0.31 -0.33
107 AT5G37730 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G23150.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.51 0.31 -0.32
108 AT4G08190 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.51 0.33 -0.31
109 AT3G18360 VQ motif-containing protein -0.51 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
110 C0153 Monogalactosyldiacylgycerol-34:6 - a Monogalactosyldiacylgycerol glycolipid biosynthesis,
triacylglycerol degradation,
linoleate biosynthesis I,
glutathione redox reactions I 		0.79 0.46 -0.46 C0153
111 C0035 4-Methoxyindol-3-ylmethylglucosinolate - 4-Methoxy-3-indolylmethyl glucosinolate glucosinolate biosynthesis from tryptophan,
indole glucosinolate breakdown (active in intact plant cell) 		-0.7 0.44 -0.45 C0035
112 C0230 Rutin - - polyphenol biosynthesis -0.66 0.46 -0.44