AT4G22980 : -
Query Information
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AGICode AT4G22980
Description FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT5G51920.1); Has 520 Blast hits to 468 proteins in 130 species: Archae - 5; Bacteria - 23; Metazoa - 99; Fungi - 131; Plants - 231; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G22980 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9
growth stages; BEST Arabidopsis thaliana protein match is:
Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein (TAIR:AT5G51920.1); Has 520 Blast hits
to 468 proteins in 130 species: Archae - 5; Bacteria - 23;
Metazoa - 99; Fungi - 131; Plants - 231; Viruses - 0; Other
Eukaryotes - 31 (source: NCBI BLink).		 1 0.33 -0.32
2 AT3G50760 galacturonosyltransferase-like 2 galacturonosyltransferase-like 2 0.88 0.3 -0.34
3 AT5G17630 Nucleotide/sugar transporter family protein -0.86 0.28 -0.33
4 AT4G30210 P450 reductase 2 AR2, P450 reductase 2 0.86 0.32 -0.3
5 AT3G48760 DHHC-type zinc finger family protein 0.85 0.34 -0.3
6 AT1G18470 Transmembrane Fragile-X-F-associated protein 0.85 0.33 -0.32
7 AT5G51070 Clp ATPase CLPD, EARLY RESPONSIVE TO
DEHYDRATION 1, SENESCENCE
ASSOCIATED GENE 15		 0.85 0.3 -0.33
8 AT2G14620 xyloglucan endotransglucosylase/hydrolase 10 xyloglucan
endotransglucosylase/hydrolase 10		 0.85 0.31 -0.3
9 AT5G46350 WRKY DNA-binding protein 8 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 8, WRKY
DNA-binding protein 8		 0.85 0.33 -0.31
10 AT5G12890 UDP-Glycosyltransferase superfamily protein 0.84 0.32 -0.31
11 AT2G39700 expansin A4 ATEXP4, expansin A4, ATHEXP ALPHA
1.6, expansin A4		 -0.84 0.3 -0.3
12 AT1G06430 FTSH protease 8 FTSH protease 8 0.84 0.32 -0.32
13 AT3G03890 FMN binding 0.83 0.31 -0.32
14 AT3G14690 cytochrome P450, family 72, subfamily A, polypeptide 15 cytochrome P450, family 72,
subfamily A, polypeptide 15		 0.83 0.33 -0.32
15 AT3G45160 Putative membrane lipoprotein -0.83 0.29 -0.31
16 AT4G12420 Cupredoxin superfamily protein SKU5 -0.83 0.33 -0.31
17 AT3G12740 ALA-interacting subunit 1 ALA-interacting subunit 1 0.83 0.33 -0.3
18 AT3G16785 phospholipase D P1 PHOSPHOLIPASE D ZETA 1,
phospholipase D P1, PHOSPHOLIPASE
D ZETA1, PLDZETA1		 0.83 0.33 -0.32
19 AT2G06530 SNF7 family protein VPS2.1 0.83 0.31 -0.35
20 AT2G26230 uricase / urate oxidase / nodulin 35, putative 0.82 0.3 -0.32
21 AT1G68820 Transmembrane Fragile-X-F-associated protein 0.82 0.31 -0.29
22 AT5G49890 chloride channel C ATCLC-C, chloride channel C 0.82 0.36 -0.31
23 AT1G23060 BEST Arabidopsis thaliana protein match is: TPX2 (targeting
protein for Xklp2) protein family (TAIR:AT1G70950.1); Has
449 Blast hits to 419 proteins in 98 species: Archae - 0;
Bacteria - 40; Metazoa - 139; Fungi - 21; Plants - 158;
Viruses - 3; Other Eukaryotes - 88 (source: NCBI BLink).		 0.82 0.31 -0.31
24 AT1G32940 Subtilase family protein ATSBT3.5, SBT3.5 0.82 0.32 -0.33
25 AT5G54870 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G27020.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.82 0.32 -0.33
26 AT5G61560 U-box domain-containing protein kinase family protein 0.82 0.33 -0.3
27 AT5G43430 electron transfer flavoprotein beta electron transfer flavoprotein
beta		 0.82 0.3 -0.29
28 AT1G52190 Major facilitator superfamily protein -0.82 0.31 -0.31
29 AT3G01410 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 -0.81 0.31 -0.3
30 AT2G37970 SOUL heme-binding family protein SOUL-1 0.81 0.32 -0.29
31 AT2G25625 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED
DURING: LP.06 six leaves visible, LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage; Has 24 Blast hits to 24 proteins in 9 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.81 0.32 -0.34
32 AT5G62720 Integral membrane HPP family protein -0.81 0.32 -0.3
33 AT3G51660 Tautomerase/MIF superfamily protein 0.81 0.3 -0.32
34 AT1G32960 Subtilase family protein ATSBT3.3, SBT3.3 0.8 0.31 -0.31
35 AT3G43230 RING/FYVE/PHD-type zinc finger family protein 0.8 0.31 -0.32
36 AT3G29350 histidine-containing phosphotransmitter 2 histidine-containing
phosphotransmitter 2		 0.8 0.32 -0.32
37 AT3G14205 Phosphoinositide phosphatase family protein 0.8 0.32 -0.33
38 AT1G54130 RELA/SPOT homolog 3 AT-RSH3, RELA/SPOT HOMOLOG 3,
RELA/SPOT homolog 3		 0.8 0.33 -0.31
39 AT2G41560 autoinhibited Ca(2+)-ATPase, isoform 4 autoinhibited Ca(2+)-ATPase,
isoform 4		 -0.8 0.32 -0.32
40 AT1G28050 B-box type zinc finger protein with CCT domain 0.8 0.33 -0.32
41 AT3G56620 nodulin MtN21 /EamA-like transporter family protein 0.8 0.32 -0.31
42 AT1G76130 alpha-amylase-like 2 alpha-amylase-like 2, ARABIDOPSIS
THALIANA ALPHA-AMYLASE-LIKE 2		 0.79 0.32 -0.3
43 AT3G05010 Protein of unknown function, transmembrane-40 0.79 0.32 -0.31
44 AT2G37860 Protein of unknown function (DUF3411) LOWER CELL DENSITY 1 -0.79 0.32 -0.31
45 AT4G02340 alpha/beta-Hydrolases superfamily protein 0.79 0.3 -0.32
46 AT1G74360 Leucine-rich repeat protein kinase family protein 0.79 0.3 -0.3
47 AT1G73080 PEP1 receptor 1 PEP1 RECEPTOR 1, PEP1 receptor 1 0.79 0.32 -0.33
48 AT2G26640 3-ketoacyl-CoA synthase 11 3-ketoacyl-CoA synthase 11 -0.79 0.32 -0.29
49 AT4G32830 ataurora1 ataurora1, ataurora1 -0.79 0.31 -0.32
50 AT2G15620 nitrite reductase 1 ARABIDOPSIS THALIANA NITRITE
REDUCTASE, NITRITE REDUCTASE,
nitrite reductase 1		 -0.79 0.31 -0.33
51 AT1G75850 VPS35 homolog B VPS35 homolog B 0.79 0.32 -0.33
52 AT2G29470 glutathione S-transferase tau 3 glutathione S-transferase tau 3,
GLUTATHIONE S-TRANSFERASE 21,
glutathione S-transferase tau 3		 0.79 0.33 -0.34
53 AT3G21700 Ras-related small GTP-binding family protein ATSGP2, SGP2 0.79 0.33 -0.31
54 AT1G33110 MATE efflux family protein 0.79 0.34 -0.32
55 AT4G18050 P-glycoprotein 9 ATP-binding cassette B9,
P-glycoprotein 9		 0.79 0.33 -0.28
56 AT1G04780 Ankyrin repeat family protein 0.79 0.3 -0.32
57 AT5G05180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G10880.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.79 0.31 -0.32
58 AT1G76490 hydroxy methylglutaryl CoA reductase 1 AtHMGR1, hydroxy methylglutaryl
CoA reductase 1,
3-HYDROXY-3-METHYLGLUTARYL COA
REDUCTASE 1		 0.79 0.3 -0.31
59 AT4G12300 cytochrome P450, family 706, subfamily A, polypeptide 4 cytochrome P450, family 706,
subfamily A, polypeptide 4		 0.79 0.33 -0.31
60 AT4G34370 RING/U-box superfamily protein ARIADNE 1, ARABIDOPSIS ARIADNE 1 0.79 0.3 -0.33
61 AT1G04680 Pectin lyase-like superfamily protein -0.78 0.31 -0.33
62 AT3G53960 Major facilitator superfamily protein 0.78 0.31 -0.33
63 AT3G22370 alternative oxidase 1A alternative oxidase 1A, ATAOX1A,
AtHSR3, hyper-sensitivity-related
3		 0.78 0.33 -0.33
64 AT5G52890 AT hook motif-containing protein -0.78 0.35 -0.32
65 AT1G26390 FAD-binding Berberine family protein 0.78 0.33 -0.32
66 AT5G42050 DCD (Development and Cell Death) domain protein 0.78 0.32 -0.32
67 AT3G55640 Mitochondrial substrate carrier family protein 0.78 0.31 -0.31
68 AT5G16830 syntaxin of plants 21 ATPEP12, ATSYP21, PEP12, PEP12P,
syntaxin of plants 21		 0.78 0.3 -0.33
69 AT1G54180 BREVIS RADIX-like 3 ARABIDOPSIS THALIANA BREVIS
RADIX-LIKE 3, BREVIS RADIX-like 3		 -0.78 0.33 -0.32
70 AT2G38810 histone H2A 8 histone H2A 8 -0.78 0.33 -0.32
71 AT4G31550 WRKY DNA-binding protein 11 ATWRKY11, WRKY DNA-binding protein
11		 0.78 0.32 -0.33
72 AT3G16240 delta tonoplast integral protein AQP1, ATTIP2;1, delta tonoplast
integral protein, DELTA-TIP1,
TIP2;1		 -0.78 0.3 -0.31
73 AT1G16520 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G56080.1); Has 243 Blast
hits to 234 proteins in 69 species: Archae - 2; Bacteria -
2; Metazoa - 61; Fungi - 9; Plants - 125; Viruses - 0;
Other Eukaryotes - 44 (source: NCBI BLink).		 -0.78 0.31 -0.34
74 AT5G56190 Transducin/WD40 repeat-like superfamily protein 0.78 0.3 -0.33
75 AT3G25620 ABC-2 type transporter family protein ATP-binding cassette G21 0.78 0.32 -0.3
76 AT4G03410 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 0.78 0.31 -0.33
77 AT2G43430 glyoxalase 2-1 glyoxalase 2-1, GLYOXALASE II 0.78 0.32 -0.32
78 AT1G15520 pleiotropic drug resistance 12 ATP-binding cassette G40,
Arabidopsis thaliana ATP-binding
cassette G40, PLEIOTROPIC DRUG
RESISTANCE 12, pleiotropic drug
resistance 12		 0.78 0.33 -0.32
79 AT3G12400 Ubiquitin-conjugating enzyme/RWD-like protein ATELC, ELC 0.78 0.32 -0.3
80 AT1G75300 NmrA-like negative transcriptional regulator family protein 0.77 0.31 -0.32
81 AT4G39630 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.77 0.3 -0.31
82 AT2G25880 ataurora2 ataurora2, ataurora2 -0.77 0.3 -0.31
83 AT1G16920 RAB GTPase homolog A1B RAB GTPase homolog A1B, RAB11, RAB
GTPase homolog A1B		 -0.77 0.33 -0.29
84 AT5G25580 BEST Arabidopsis thaliana protein match is: DDT domain
superfamily (TAIR:AT1G18950.1); Has 178 Blast hits to 178
proteins in 75 species: Archae - 0; Bacteria - 4; Metazoa -
51; Fungi - 33; Plants - 60; Viruses - 1; Other Eukaryotes
- 29 (source: NCBI BLink).		 -0.77 0.3 -0.3
85 AT5G66920 SKU5 similar 17 SKU5 similar 17 -0.77 0.31 -0.31
86 AT3G11480 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 ATBSMT1, BSMT1 0.77 0.31 -0.31
87 AT1G72370 40s ribosomal protein SA AP40, 40s ribosomal protein SA,
RP40, RPSAA		 -0.77 0.33 -0.29
88 AT5G46700 Tetraspanin family protein TETRASPANIN 1, TORNADO 2 -0.77 0.37 -0.33
89 AT1G45050 Ubiquitin-conjugating enzyme family protein ATUBC2-1, Arabidopsis thaliana
ubiquitin-conjugating enzyme 15		 0.77 0.31 -0.31
90 AT5G13200 GRAM domain family protein 0.77 0.3 -0.34
91 AT2G37580 RING/U-box superfamily protein 0.77 0.31 -0.31
92 AT2G26920 Ubiquitin-associated/translation elongation factor EF1B
protein		 0.77 0.32 -0.32
93 AT5G65010 asparagine synthetase 2 asparagine synthetase 2 -0.77 0.34 -0.29
94 AT2G41510 cytokinin oxidase/dehydrogenase 1 CYTOKININ OXIDASE/DEHYDROGENASE 1,
cytokinin oxidase/dehydrogenase 1		 -0.76 0.33 -0.31
95 AT5G66230 Chalcone-flavanone isomerase family protein -0.76 0.31 -0.32
96 AT1G60390 polygalacturonase 1 polygalacturonase 1 -0.76 0.3 -0.32
97 AT1G50490 ubiquitin-conjugating enzyme 20 ubiquitin-conjugating enzyme 20 -0.76 0.3 -0.31
98 AT1G80050 adenine phosphoribosyl transferase 2 adenine phosphoribosyl transferase
2, ATAPT2, PHT1.1		 -0.76 0.32 -0.31
99 AT1G07370 proliferating cellular nuclear antigen 1 PROLIFERATING CELLULAR NUCLEAR
ANTIGEN 1, proliferating cellular
nuclear antigen 1		 -0.76 0.3 -0.31
100 AT1G06420 unknown protein; Has 1017 Blast hits to 654 proteins in 124
species: Archae - 0; Bacteria - 39; Metazoa - 232; Fungi -
69; Plants - 40; Viruses - 0; Other Eukaryotes - 637
(source: NCBI BLink).		 -0.76 0.31 -0.34
101 AT5G48800 Phototropic-responsive NPH3 family protein -0.76 0.31 -0.31
102 AT5G44900 Toll-Interleukin-Resistance (TIR) domain family protein -0.75 0.29 -0.31
103 AT1G18250 Pathogenesis-related thaumatin superfamily protein ATLP-1 -0.75 0.33 -0.28
104 AT4G05400 copper ion binding -0.75 0.32 -0.31
105 AT3G49750 receptor like protein 44 receptor like protein 44, receptor
like protein 44		 -0.75 0.32 -0.31
106 AT5G04950 nicotianamine synthase 1 ARABIDOPSIS THALIANA NICOTIANAMINE
SYNTHASE 1, nicotianamine synthase
1		 -0.75 0.31 -0.29
107 AT5G62550 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 9 growth stages; Has 14949 Blast hits to 9947
proteins in 971 species: Archae - 43; Bacteria - 3248;
Metazoa - 4424; Fungi - 1542; Plants - 562; Viruses - 55;
Other Eukaryotes - 5075 (source: NCBI BLink).		 -0.75 0.32 -0.32
108 AT5G15520 Ribosomal protein S19e family protein -0.74 0.31 -0.33
109 AT3G11250 Ribosomal protein L10 family protein -0.74 0.34 -0.31
110 AT5G27440 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: shoot apex, shoot, flower, seed;
EXPRESSED DURING: petal differentiation and expansion
stage, E expanded cotyledon stage; Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.74 0.3 -0.36
111 AT1G03300 DOMAIN OF UNKNOWN FUNCTION 724 1 DOMAIN OF UNKNOWN FUNCTION 724 1,
DOMAIN OF UNKNOWN FUNCTION 724 1		 -0.73 0.33 -0.33
112 AT4G31840 early nodulin-like protein 15 AtENODL15, early nodulin-like
protein 15		 -0.73 0.31 -0.31
113 AT1G29980 Protein of unknown function, DUF642 -0.73 0.34 -0.33
114 AT3G52580 Ribosomal protein S11 family protein -0.73 0.35 -0.34
115 AT4G34260 1,2-alpha-L-fucosidases ALTERED XYLOGLUCAN 8, FUC95A -0.73 0.32 -0.3
116 AT2G42110 unknown protein; Has 27 Blast hits to 27 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.73 0.34 -0.32
117 AT5G50120 Transducin/WD40 repeat-like superfamily protein -0.73 0.32 -0.3
118 AT5G15460 membrane-anchored ubiquitin-fold protein 2 membrane-anchored ubiquitin-fold
protein 2		 -0.73 0.32 -0.3
119 AT2G22170 Lipase/lipooxygenase, PLAT/LH2 family protein -0.73 0.31 -0.31
120 AT5G63810 beta-galactosidase 10 beta-galactosidase 10 -0.72 0.3 -0.31
121 AT5G15830 basic leucine-zipper 3 basic leucine-zipper 3, basic
leucine-zipper 3		 -0.72 0.34 -0.32
122 AT3G62050 Putative endonuclease or glycosyl hydrolase -0.72 0.3 -0.32
123 AT1G02640 beta-xylosidase 2 BETA-XYLOSIDASE 2, beta-xylosidase
2		 -0.72 0.31 -0.3
124 AT3G07580 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED
DURING: 12 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G48335.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.72 0.29 -0.31
125 AT3G63110 isopentenyltransferase 3 isopentenyltransferase 3,
isopentenyltransferase 3		 -0.72 0.31 -0.3
126 AT3G27640 Transducin/WD40 repeat-like superfamily protein -0.72 0.33 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
127 C0265 Vitexin - - - 0.85 0.43 -0.43