AGICode | AT4G20090 |
Description | Pentatricopeptide repeat (PPR) superfamily protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT4G20090 | Pentatricopeptide repeat (PPR) superfamily protein | embryo defective 1025 | 1 | 0.31 | -0.3 | ||
2 | AT2G28590 | Protein kinase superfamily protein | 0.65 | 0.31 | -0.31 | |||
3 | AT5G14770 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.65 | 0.3 | -0.33 | |||
4 | AT5G06810 | Mitochondrial transcription termination factor family protein |
0.65 | 0.3 | -0.33 | |||
5 | AT4G29450 | Leucine-rich repeat protein kinase family protein | 0.65 | 0.31 | -0.33 | |||
6 | AT2G47120 | NAD(P)-binding Rossmann-fold superfamily protein | -0.64 | 0.31 | -0.32 | |||
7 | AT3G62140 | CONTAINS InterPro DOMAIN/s: NEFA-interacting nuclear protein NIP30, N-terminal (InterPro:IPR019331); Has 398 Blast hits to 395 proteins in 139 species: Archae - 0; Bacteria - 6; Metazoa - 193; Fungi - 83; Plants - 36; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). |
0.63 | 0.34 | -0.3 | |||
8 | AT2G31035 | BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 1B (TAIR:AT2G31030.1); Has 7 Blast hits to 7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.62 | 0.31 | -0.35 | |||
9 | AT1G57650 | ATP binding | 0.6 | 0.31 | -0.31 | |||
10 | AT3G20140 | cytochrome P450, family 705, subfamily A, polypeptide 23 | cytochrome P450, family 705, subfamily A, polypeptide 23 |
-0.6 | 0.32 | -0.32 | ||
11 | AT3G28780 | Protein of unknown function (DUF1216) | 0.59 | 0.31 | -0.31 | |||
12 | AT4G34330 | Protein of unknown function (DUF677) | 0.58 | 0.31 | -0.3 | |||
13 | AT4G24640 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
APPB1 | -0.57 | 0.34 | -0.3 | ||
14 | AT5G01860 | C2H2 and C2HC zinc fingers superfamily protein | 0.57 | 0.31 | -0.33 | |||
15 | AT2G03210 | fucosyltransferase 2 | ATFUT2, fucosyltransferase 2 | -0.56 | 0.32 | -0.32 | ||
16 | AT5G44880 | transposable element gene | -0.56 | 0.3 | -0.29 | |||
17 | AT3G43390 | transposable element gene | 0.55 | 0.31 | -0.31 | |||
18 | AT1G75600 | Histone superfamily protein | -0.55 | 0.3 | -0.34 | |||
19 | AT5G56620 | NAC domain containing protein 99 | NAC domain containing protein 99, NAC domain containing protein 99 |
-0.54 | 0.3 | -0.34 | ||
20 | AT5G46100 | Pentatricopeptide repeat (PPR) superfamily protein | 0.53 | 0.3 | -0.31 | |||
21 | AT1G17760 | Tetratricopeptide repeat (TPR)-like superfamily protein | ARABIDOPSIS THALIANA CLEAVAGE STIMULATION FACTOR 77, CSTF77 |
0.52 | 0.31 | -0.31 | ||
22 | AT4G39490 | cytochrome P450, family 96, subfamily A, polypeptide 10 | cytochrome P450, family 96, subfamily A, polypeptide 10 |
-0.52 | 0.29 | -0.33 | ||
23 | AT3G55870 | ADC synthase superfamily protein | -0.52 | 0.32 | -0.29 | |||
24 | AT4G26930 | myb domain protein 97 | myb domain protein 97, myb domain protein 97 |
-0.52 | 0.3 | -0.31 | ||
25 | AT3G58780 | K-box region and MADS-box transcription factor family protein |
AGAMOUS-like 1, SHATTERPROOF 1 | 0.52 | 0.32 | -0.32 | ||
26 | AT3G45480 | RING/U-box protein with C6HC-type zinc finger | -0.51 | 0.33 | -0.36 | |||
27 | AT3G45220 | Serine protease inhibitor (SERPIN) family protein | -0.51 | 0.32 | -0.33 | |||
28 | AT5G47580 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
ALTERED SEED GERMINATION 7 | 0.51 | 0.28 | -0.3 | ||
29 | AT2G17210 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.51 | 0.31 | -0.3 | |||
30 | AT1G31620 | unknown protein; Has 9 Blast hits to 9 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.51 | 0.34 | -0.3 | |||
31 | AT1G73410 | myb domain protein 54 | ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 54, myb domain protein 54 |
-0.5 | 0.3 | -0.33 | ||
32 | AT2G01740 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.5 | 0.3 | -0.29 | |||
33 | AT2G45460 | SMAD/FHA domain-containing protein | 0.5 | 0.31 | -0.3 | |||
34 | AT2G03190 | SKP1-like 16 | SKP1-like 16, SKP1-like 16 | 0.5 | 0.3 | -0.32 | ||
35 | AT4G08830 | transposable element gene | 0.5 | 0.31 | -0.34 | |||
36 | AT1G54840 | HSP20-like chaperones superfamily protein | -0.49 | 0.3 | -0.3 | |||
37 | AT1G68250 | unknown protein; Has 5 Blast hits to 5 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.49 | 0.33 | -0.32 | |||
38 | AT2G39910 | ARM repeat superfamily protein | 0.49 | 0.31 | -0.3 | |||
39 | AT3G25750 | F-box family protein with a domain of unknown function (DUF295) |
0.49 | 0.32 | -0.31 | |||
40 | AT1G22480 | Cupredoxin superfamily protein | -0.49 | 0.33 | -0.3 | |||
41 | AT4G08590 | ORTHRUS-like | ORTH-LIKE 1, ORTHRUS-LIKE 1, ORTHRUS-like, VARIANT IN METHYLATION 6 |
-0.49 | 0.32 | -0.31 | ||
42 | AT2G10500 | transposable element gene | -0.48 | 0.31 | -0.34 | |||
43 | AT4G33230 | Plant invertase/pectin methylesterase inhibitor superfamily | -0.48 | 0.3 | -0.31 | |||
44 | AT5G17040 | UDP-Glycosyltransferase superfamily protein | 0.48 | 0.3 | -0.31 | |||
45 | AT5G17910 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G29620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.48 | 0.32 | -0.29 | |||
46 | AT1G32570 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.48 | 0.34 | -0.33 | |||
47 | AT1G34070 | CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G48050.1); Has 648 Blast hits to 647 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 25; Plants - 607; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.48 | 0.3 | -0.32 | |||
48 | AT4G08450 | Disease resistance protein (TIR-NBS-LRR class) family | -0.48 | 0.31 | -0.31 | |||
49 | AT1G67880 | beta-1,4-N-acetylglucosaminyltransferase family protein | -0.47 | 0.34 | -0.33 | |||
50 | AT1G53420 | Leucine-rich repeat transmembrane protein kinase | 0.46 | 0.32 | -0.3 | |||
51 | AT5G41550 | Disease resistance protein (TIR-NBS-LRR class) family | -0.46 | 0.31 | -0.31 | |||
52 | AT5G36960 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.46 | 0.3 | -0.34 | |||
53 | AT2G14640 | transposable element gene | -0.46 | 0.31 | -0.3 | |||
54 | AT4G09710 | transposable element gene | -0.46 | 0.31 | -0.3 | |||
55 | AT2G04870 | unknown protein; Has 14 Blast hits to 14 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). |
-0.45 | 0.31 | -0.32 | |||
56 | AT5G39630 | Vesicle transport v-SNARE family protein | -0.43 | 0.32 | -0.31 | |||
57 | AT1G56520 | Disease resistance protein (TIR-NBS-LRR class) family | -0.43 | 0.32 | -0.32 |