AT4G18800 : ATHSGBP
Query Information
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AGICode AT4G18800
Description RAB GTPase homolog A1D
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G18800 RAB GTPase homolog A1D ATHSGBP, ATRAB11B, RAB GTPase
homolog A1D, RAB GTPase homolog
A1D		 1 0.32 -0.31
2 AT3G07270 GTP cyclohydrolase I 0.85 0.32 -0.33
3 AT2G35900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 13 growth stages; Has 32 Blast hits to 32 proteins
in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.81 0.3 -0.33
4 AT4G17070 peptidyl-prolyl cis-trans isomerases 0.8 0.33 -0.3
5 AT1G74270 Ribosomal protein L35Ae family protein 0.8 0.31 -0.31
6 AT3G09770 RING/U-box superfamily protein LOSS OF GDU 2 -0.8 0.31 -0.29
7 AT1G24280 glucose-6-phosphate dehydrogenase 3 glucose-6-phosphate dehydrogenase
3		 0.79 0.31 -0.32
8 AT3G05880 Low temperature and salt responsive protein family RARE-COLD-INDUCIBLE 2A -0.79 0.3 -0.3
9 AT3G28007 Nodulin MtN3 family protein AtSWEET4, SWEET4 -0.79 0.32 -0.33
10 AT5G20050 Protein kinase superfamily protein 0.79 0.3 -0.34
11 AT5G16630 DNA repair protein Rad4 family ATRAD4, RAD4 -0.79 0.31 -0.32
12 AT4G12390 pectin methylesterase inhibitor 1 pectin methylesterase inhibitor 1 0.78 0.3 -0.3
13 AT4G00710 BR-signaling kinase 3 BR-signaling kinase 3 0.78 0.34 -0.31
14 AT4G11460 cysteine-rich RLK (RECEPTOR-like protein kinase) 30 cysteine-rich RLK (RECEPTOR-like
protein kinase) 30		 0.77 0.29 -0.33
15 AT1G29395 COLD REGULATED 314 INNER MEMBRANE 1 COLD REGULATED 314 THYLAKOID
MEMBRANE 1, COLD REGULATED 314
INNER MEMBRANE 1, cold regulated
414 thylakoid membrane 1		 -0.77 0.31 -0.31
16 AT5G05990 Mitochondrial glycoprotein family protein 0.77 0.33 -0.31
17 AT2G32380 Transmembrane protein 97, predicted 0.77 0.31 -0.32
18 AT3G16940 calmodulin binding;transcription regulators -0.76 0.29 -0.3
19 AT1G73480 alpha/beta-Hydrolases superfamily protein -0.76 0.28 -0.28
20 AT1G58360 amino acid permease 1 amino acid permease 1, NEUTRAL
AMINO ACID TRANSPORTER 2		 -0.76 0.3 -0.31
21 AT1G48960 Adenine nucleotide alpha hydrolases-like superfamily
protein		 0.76 0.3 -0.32
22 AT2G42610 Protein of unknown function (DUF640) LIGHT SENSITIVE HYPOCOTYLS 10 0.76 0.34 -0.31
23 AT5G62000 auxin response factor 2 ARF1-BINDING PROTEIN, auxin
response factor 2, HLS1
SUPPRESSOR, ORESARA 14		 -0.76 0.32 -0.32
24 AT4G11290 Peroxidase superfamily protein 0.76 0.3 -0.32
25 AT4G21870 HSP20-like chaperones superfamily protein 0.76 0.3 -0.31
26 AT4G05400 copper ion binding 0.75 0.33 -0.3
27 AT4G38350 Patched family protein -0.75 0.33 -0.32
28 AT1G04830 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.75 0.33 -0.31
29 AT5G62000 auxin response factor 2 ARF1-BINDING PROTEIN, auxin
response factor 2, HLS1
SUPPRESSOR, ORESARA 14		 -0.75 0.34 -0.33
30 AT1G16000 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G80890.1); Has 41 Blast hits
to 40 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.74 0.35 -0.31
31 AT3G14310 pectin methylesterase 3 pectin methylesterase 3, pectin
methylesterase 3		 0.74 0.33 -0.3
32 AT5G65650 Protein of unknown function (DUF1195) 0.74 0.33 -0.33
33 AT5G22290 NAC domain containing protein 89 NAC domain containing protein 89,
fructose-sensing quantitative
trait locus 6, NAC domain
containing protein 89		 -0.74 0.33 -0.31
34 AT4G17870 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 PYRABACTIN RESISTANCE 1,
regulatory component of ABA
receptor 11		 0.74 0.3 -0.31
35 AT3G02790 zinc finger (C2H2 type) family protein 0.74 0.32 -0.31
36 AT2G22240 myo-inositol-1-phosphate synthase 2 INOSITOL 3-PHOSPHATE SYNTHASE 2,
MYO-INOSITOL-1-PHOSTPATE SYNTHASE
2, myo-inositol-1-phosphate
synthase 2		 -0.74 0.3 -0.32
37 AT5G14040 phosphate transporter 3;1 phosphate transporter 3;1 0.74 0.31 -0.32
38 AT1G07960 PDI-like 5-1 PDI-like 5-1, PDI-like 5-1 0.74 0.3 -0.31
39 AT4G37660 Ribosomal protein L12/ ATP-dependent Clp protease adaptor
protein ClpS family protein		 0.74 0.3 -0.3
40 AT5G12140 cystatin-1 cystatin-1, cystatin-1 -0.73 0.3 -0.31
41 AT4G13550 triglyceride lipases;triglyceride lipases -0.73 0.31 -0.32
42 AT1G68020 UDP-Glycosyltransferase / trehalose-phosphatase family
protein		 ATTPS6, TREHALOSE -6-PHOSPHATASE
SYNTHASE S6		 -0.73 0.31 -0.33
43 AT4G35300 tonoplast monosaccharide transporter2 tonoplast monosaccharide
transporter2		 -0.73 0.32 -0.31
44 AT2G40460 Major facilitator superfamily protein -0.73 0.33 -0.31
45 AT2G24420 DNA repair ATPase-related -0.73 0.32 -0.31
46 AT5G57050 Protein phosphatase 2C family protein ABA INSENSITIVE 2, AtABI2 -0.73 0.31 -0.31
47 AT5G44670 Domain of unknown function (DUF23) -0.73 0.3 -0.31
48 AT1G62310 transcription factor jumonji (jmjC) domain-containing
protein		 -0.72 0.32 -0.32
49 AT1G31750 proline-rich family protein -0.72 0.31 -0.31
50 AT5G47020 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G11700.2); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.72 0.36 -0.31
51 AT1G55110 indeterminate(ID)-domain 7 indeterminate(ID)-domain 7,
indeterminate(ID)-domain 7		 -0.72 0.31 -0.34
52 AT2G42850 cytochrome P450, family 718 cytochrome P450, family 718 0.72 0.31 -0.33
53 AT2G38790 unknown protein; Has 21 Blast hits to 21 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.72 0.34 -0.34
54 AT5G49660 Leucine-rich repeat transmembrane protein kinase family
protein		 XYLEM INTERMIXED WITH PHLOEM 1 -0.72 0.3 -0.3
55 AT2G39450 Cation efflux family protein ATMTP11, MTP11 -0.72 0.33 -0.31
56 AT1G14210 Ribonuclease T2 family protein 0.72 0.3 -0.32
57 AT3G57300 INO80 ortholog INO80 ORTHOLOG, INO80 ortholog -0.71 0.35 -0.3
58 AT4G34770 SAUR-like auxin-responsive protein family 0.71 0.32 -0.32
59 AT5G64000 Inositol monophosphatase family protein ATSAL2, SAL2 0.71 0.32 -0.3
60 AT2G16990 Major facilitator superfamily protein -0.71 0.32 -0.3
61 AT5G01990 Auxin efflux carrier family protein -0.71 0.33 -0.32
62 AT5G20640 Protein of unknown function (DUF567) 0.71 0.31 -0.3
63 AT4G35790 phospholipase D delta ARABIDOPSIS THALIANA PHOSPHOLIPASE
D DELTA, phospholipase D delta		 -0.71 0.32 -0.3
64 AT1G76990 ACT domain repeat 3 ACT domain repeat 3 0.71 0.3 -0.33
65 AT3G27620 alternative oxidase 1C alternative oxidase 1C 0.71 0.32 -0.31
66 AT3G05640 Protein phosphatase 2C family protein -0.71 0.31 -0.31
67 AT1G22310 methyl-CPG-binding domain 8 ATMBD8, methyl-CPG-binding domain
8		 -0.71 0.29 -0.3
68 AT1G18870 isochorismate synthase 2 ARABIDOPSIS ISOCHORISMATE SYNTHASE
2, isochorismate synthase 2		 -0.7 0.32 -0.32
69 AT3G07360 plant U-box 9 ARABIDOPSIS THALIANA PLANT U-BOX
9, plant U-box 9		 -0.7 0.3 -0.3
70 AT2G43500 Plant regulator RWP-RK family protein -0.7 0.3 -0.29
71 AT5G20250 Raffinose synthase family protein DARK INDUCIBLE 10, raffinose
synthase 6		 0.7 0.29 -0.32
72 AT5G16470 zinc finger (C2H2 type) family protein 0.7 0.33 -0.3
73 AT3G01560 Protein of unknown function (DUF1421) -0.7 0.33 -0.32
74 AT1G69260 ABI five binding protein ABI five binding protein -0.7 0.31 -0.31
75 AT1G61660 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.7 0.31 -0.31
76 AT1G09815 polymerase delta 4 polymerase delta 4 0.7 0.3 -0.31
77 AT4G32770 tocopherol cyclase, chloroplast / vitamin E deficient 1
(VTE1) / sucrose export defective 1 (SXD1)		 SUCROSE EXPORT DEFECTIVE 1,
VITAMIN E DEFICIENT 1		 -0.7 0.3 -0.3
78 AT4G00450 RNA polymerase II transcription mediators CENTER CITY, CRYPTIC PRECOCIOUS -0.7 0.3 -0.31
79 AT2G31960 glucan synthase-like 3 glucan synthase-like 3, ATGSL3,
GSL03, glucan synthase-like 3		 -0.69 0.3 -0.31
80 AT5G49710 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G24590.1); Has 35333 Blast
hits to 34131 proteins in 2444 species: Archae - 798;
Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531;
Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).		 -0.69 0.3 -0.33
81 AT4G14100 transferases, transferring glycosyl groups 0.69 0.33 -0.31
82 AT2G43050 Plant invertase/pectin methylesterase inhibitor superfamily ATPMEPCRD 0.69 0.32 -0.29
83 AT1G65840 polyamine oxidase 4 polyamine oxidase 4, polyamine
oxidase 4		 0.69 0.3 -0.32
84 AT3G04230 Ribosomal protein S5 domain 2-like superfamily protein 0.69 0.33 -0.31
85 AT5G51890 Peroxidase superfamily protein -0.69 0.33 -0.3
86 AT1G11190 bifunctional nuclease i bifunctional nuclease i,
ENDONUCLEASE 1		 -0.69 0.32 -0.32
87 AT5G15630 COBRA-like extracellular glycosyl-phosphatidyl
inositol-anchored protein family		 COBRA-LIKE4, IRREGULAR XYLEM 6 -0.69 0.31 -0.31
88 AT4G08460 Protein of unknown function (DUF1644) 0.69 0.33 -0.32
89 AT4G01720 WRKY family transcription factor AtWRKY47, WRKY47 0.69 0.33 -0.32
90 AT5G19420 Regulator of chromosome condensation (RCC1) family with
FYVE zinc finger domain		 -0.69 0.3 -0.32
91 AT2G32090 Lactoylglutathione lyase / glyoxalase I family protein -0.69 0.32 -0.32
92 AT5G05430 RNA-binding protein 0.69 0.32 -0.31
93 AT3G15880 WUS-interacting protein 2 TOPLESS-RELATED 4, WUS-interacting
protein 2		 -0.69 0.31 -0.31
94 AT2G01460 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.68 0.32 -0.32
95 AT2G28420 Lactoylglutathione lyase / glyoxalase I family protein glyoxylase I 8 -0.68 0.34 -0.31
96 AT5G57390 AINTEGUMENTA-like 5 AINTEGUMENTA-like 5, CHOTTO 1,
EMBRYOMAKER, PLETHORA 5		 -0.68 0.3 -0.34
97 AT5G57040 Lactoylglutathione lyase / glyoxalase I family protein -0.68 0.32 -0.31
98 AT2G48060 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: shoot, sperm cell;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341
proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa
- 318; Fungi - 0; Plants - 93; Viruses - 0; Other
Eukaryotes - 105 (source: NCBI BLink).		 -0.67 0.3 -0.34
99 AT5G13640 phospholipid:diacylglycerol acyltransferase ARABIDOPSIS THALIANA
PHOSPHOLIPID:DIACYLGLYCEROL
ACYLTRANSFERASE,
phospholipid:diacylglycerol
acyltransferase,
PHOSPHOLIPID:DIACYLGLYCEROL
ACYLTRANSFERASE 1		 -0.67 0.31 -0.32
100 AT3G03870 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G18130.1); Has 41 Blast hits
to 41 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.67 0.31 -0.33
101 AT5G18830 squamosa promoter binding protein-like 7 SQUAMOSA PROMOTER BINDING
PROTEIN-LIKE 7, squamosa promoter
binding protein-like 7		 -0.67 0.31 -0.32
102 AT5G37500 gated outwardly-rectifying K+ channel gated outwardly-rectifying K+
channel		 -0.66 0.31 -0.32
103 AT1G35660 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 19 plant structures; EXPRESSED
DURING: 11 growth stages; Has 309 Blast hits to 256
proteins in 99 species: Archae - 0; Bacteria - 11; Metazoa
- 192; Fungi - 12; Plants - 36; Viruses - 0; Other
Eukaryotes - 58 (source: NCBI BLink).		 -0.66 0.31 -0.32
104 AT1G29390 cold regulated 314 thylakoid membrane 2 cold regulated 314 thylakoid
membrane 2, COLD REGULATED 314
INNER MEMBRANE 2		 -0.66 0.32 -0.31
105 AT1G07250 UDP-glucosyl transferase 71C4 UDP-glucosyl transferase 71C4 -0.66 0.33 -0.32
106 AT1G51090 Heavy metal transport/detoxification superfamily protein -0.66 0.3 -0.32
107 AT5G52660 Homeodomain-like superfamily protein -0.66 0.3 -0.3
108 AT1G17440 Transcription initiation factor TFIID subunit A CYTOKININ-HYPERSENSITIVE 1,
ENHANCED ETHYLENE RESPONSE 4,
TBP-ASSOCIATED FACTOR 12B		 -0.66 0.31 -0.31
109 AT5G01770 HEAT repeat ;WD domain, G-beta repeat protein protein ATRAPTOR1A, RAPTOR1A, RAPTOR2 -0.66 0.32 -0.3
110 AT5G35460 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2838 (InterPro:IPR021261); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.66 0.3 -0.31
111 AT5G64080 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 AtXYP1, xylogen protein 1 -0.66 0.31 -0.34
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
112 C0225 Raffinose D-(+)-Raffinose Raffinose ajugose biosynthesis II (galactinol-independent),
stachyose biosynthesis,
stachyose degradation 		-0.78 0.45 -0.47 C0225
113 C0189 Nicotinic acid - Nicotinate pyridine nucleotide cycling (plants),
aldoxime degradation 		-0.7 0.33 -0.32 C0189
114 C0054 Agmatine - Agmatine putrescine biosynthesis I,
putrescine biosynthesis II,
superpathway of polyamine biosynthesis 		-0.69 0.33 -0.31 C0054
115 C0092 Fumaric acid - Fumarate citrulline-nitric oxide cycle,
succinate + a ubiquinone -> a ubiquinol + fumarate,
superpathway of glyoxylate cycle and fatty acid degradation,
tyrosine degradation I,
aerobic respiration (alternative oxidase pathway),
inosine-5'-phosphate biosynthesis II,
arginine biosynthesis I,
TCA cycle variation V (plant),
TCA cycle variation III (eukaryotic),
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
purine nucleotides de novo biosynthesis II,
arginine biosynthesis II (acetyl cycle),
urea cycle,
aerobic respiration (cytochrome c) 		-0.68 0.32 -0.32 C0092