AT4G12840 : -
Query Information
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AGICode AT4G12840
Description Protein of unknown function (DUF707)
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G12840 Protein of unknown function (DUF707) 1 0.32 -0.32
2 AT5G42280 Cysteine/Histidine-rich C1 domain family protein 0.77 0.32 -0.32
3 AT4G27050 F-box/RNI-like superfamily protein -0.76 0.32 -0.31
4 AT1G59900 pyruvate dehydrogenase complex E1 alpha subunit pyruvate dehydrogenase complex E1
alpha subunit, pyruvate
dehydrogenase complex E1 alpha
subunit		 0.74 0.3 -0.31
5 AT5G05750 DNAJ heat shock N-terminal domain-containing protein 0.73 0.29 -0.31
6 AT5G05890 UDP-Glycosyltransferase superfamily protein 0.7 0.28 -0.3
7 AT3G53710 ARF-GAP domain 6 ARF-GAP domain 6 0.69 0.31 -0.32
8 AT1G69550 disease resistance protein (TIR-NBS-LRR class) 0.68 0.32 -0.3
9 AT5G26270 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.68 0.35 -0.32
10 AT5G12940 Leucine-rich repeat (LRR) family protein 0.68 0.31 -0.33
11 AT1G66540 Cytochrome P450 superfamily protein 0.68 0.3 -0.33
12 AT1G63880 Disease resistance protein (TIR-NBS-LRR class) family 0.67 0.31 -0.31
13 AT5G23710 DNA binding;DNA-directed RNA polymerases 0.66 0.32 -0.3
14 AT5G15980 Pentatricopeptide repeat (PPR) superfamily protein 0.66 0.3 -0.32
15 AT5G23230 nicotinamidase 2 nicotinamidase 2 0.66 0.31 -0.31
16 AT1G65280 DNAJ heat shock N-terminal domain-containing protein 0.65 0.32 -0.32
17 AT4G13050 Acyl-ACP thioesterase 0.65 0.3 -0.31
18 AT5G39990 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 0.64 0.31 -0.3
19 AT5G20580 BEST Arabidopsis thaliana protein match is: FRIGIDA
interacting protein 1 (TAIR:AT2G06005.1); Has 167 Blast
hits to 167 proteins in 73 species: Archae - 0; Bacteria -
25; Metazoa - 58; Fungi - 25; Plants - 43; Viruses - 0;
Other Eukaryotes - 16 (source: NCBI BLink).		 0.64 0.31 -0.33
20 AT1G79000 histone acetyltransferase of the CBP family 1 ARABIDOPSIS HISTONE
ACETYLTRANSFERASE OF THE CBP
FAMILY 1, ARABIDOPSIS THALIANA
P300/CBP ACETYLTRANSFERASE-RELATED
PROTEIN 2, histone
acetyltransferase of the CBP
family 1, P300/CBP
ACETYLTRANSFERASE-RELATED PROTEIN
2		 0.62 0.32 -0.35
21 AT1G64490 DEK, chromatin associated protein 0.62 0.3 -0.3
22 AT1G62830 LSD1-like 1 ARABIDOPSIS LYSINE-SPECIFIC
HISTONE DEMETHYLASE, ATSWP1,
LSD1-like 1, LYSINE-SPECIFIC
HISTONE DEMETHYLASE, SWP1		 0.62 0.32 -0.31
23 AT1G68370 Chaperone DnaJ-domain superfamily protein ALTERED RESPONSE TO GRAVITY 1 0.62 0.33 -0.31
24 AT1G47270 tubby like protein 6 tubby like protein 6, tubby like
protein 6		 0.62 0.34 -0.3
25 AT5G13460 IQ-domain 11 IQ-domain 11 0.61 0.33 -0.35
26 AT4G16515 Encodes a root meristem growth factor (RGF). Belongs to a
family of functionally redundant homologous peptides that
are secreted, tyrosine-sulfated, and expressed mainly in
the stem cell area and the innermost layer of central
columella cells. RGFs are required for maintenance of the
root stem cell niche and transit amplifying cell
proliferation. Members of this family include: At5g60810
(RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350
(RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240
(RGF7), At2g03830 (RGF8) and At5g64770 (RGF9).		 root meristem growth factor 6 0.61 0.31 -0.32
27 AT4G22280 F-box/RNI-like superfamily protein -0.6 0.31 -0.31
28 AT5G03200 RING/U-box superfamily protein 0.6 0.32 -0.31
29 AT4G29050 Concanavalin A-like lectin protein kinase family protein 0.6 0.33 -0.32
30 AT5G19490 Histone superfamily protein 0.6 0.33 -0.3
31 AT4G13630 Protein of unknown function, DUF593 0.59 0.32 -0.3
32 AT4G11100 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G03060.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.59 0.34 -0.32
33 AT1G74320 Protein kinase superfamily protein 0.59 0.31 -0.31
34 AT4G36380 Cytochrome P450 superfamily protein ROTUNDIFOLIA 3 -0.59 0.33 -0.31
35 AT5G24760 GroES-like zinc-binding dehydrogenase family protein -0.59 0.34 -0.32
36 AT1G65290 mitochondrial acyl carrier protein 2 mitochondrial acyl carrier protein
2		 0.59 0.31 -0.32
37 AT1G78970 lupeol synthase 1 ARABIDOPSIS THALIANA LUPEOL
SYNTHASE 1, lupeol synthase 1		 0.59 0.32 -0.34
38 AT1G70060 SIN3-like 4 SIN3-like 4 0.59 0.33 -0.32
39 AT1G52100 Mannose-binding lectin superfamily protein 0.58 0.34 -0.33
40 AT5G17890 DA1-related protein 4 CHILLING SENSITIVE 3, DA1-related
protein 4		 0.58 0.31 -0.31
41 AT2G27350 OTU-like cysteine protease family protein otubain-like deubiquitinase 1 -0.58 0.32 -0.33
42 AT3G57820 60S ribosomal protein L21 (RPL21F), pseudogene, 60S
RIBOSOMAL PROTEIN L21 - Arabidopsis thaliana,
SWISSPROT:RL21_ARATH; blastp match of 75% identity and
2.5e-15 P-value to GP|3885884|gb|AAC78102.1||AF093630 60S
ribosomal protein L21 {Oryza sativa}		 0.58 0.33 -0.31
43 AT5G17880 disease resistance protein (TIR-NBS-LRR class) constitutive shade-avoidance1 0.58 0.33 -0.32
44 AT4G09680 conserved telomere maintenance component 1 ATCTC1, conserved telomere
maintenance component 1		 0.58 0.33 -0.31
45 AT4G19240 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G43280.1); Has 19 Blast hits
to 17 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.57 0.35 -0.31
46 AT3G16090 RING/U-box superfamily protein homolog of yeast Hrd1, homolog of
yeast Hrd1		 -0.57 0.31 -0.32
47 AT4G29770 Target of trans acting-siR480/255. -0.57 0.32 -0.3
48 AT5G35730 EXS (ERD1/XPR1/SYG1) family protein 0.57 0.32 -0.33
49 AT5G38380 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: membrane; EXPRESSED
IN: 22 plant structures; EXPRESSED DURING: 14 growth
stages; CONTAINS InterPro DOMAIN/s: Protein of unknown
function DUF6, transmembrane (InterPro:IPR000620); BEST
Arabidopsis thaliana protein match is: Cation efflux family
protein (TAIR:AT2G04620.1); Has 123 Blast hits to 121
proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa -
69; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes -
9 (source: NCBI BLink).		 0.57 0.32 -0.31
50 AT1G52260 PDI-like 1-5 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 3, PDI-like
1-5, PROTEIN DISULFIDE ISOMERASE
3, PDI-like 1-5		 0.57 0.32 -0.31
51 AT5G16640 Pentatricopeptide repeat (PPR) superfamily protein 0.56 0.31 -0.31
52 AT4G08960 phosphotyrosyl phosphatase activator (PTPA) family protein -0.56 0.3 -0.31
53 AT1G73510 unknown protein; Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.56 0.31 -0.31
54 AT5G51270 U-box domain-containing protein kinase family protein 0.56 0.3 -0.32
55 AT5G27110 Tetratricopeptide repeat (TPR)-like superfamily protein 0.56 0.32 -0.33
56 AT5G41650 Lactoylglutathione lyase / glyoxalase I family protein 0.56 0.32 -0.33
57 AT1G60710 NAD(P)-linked oxidoreductase superfamily protein ATB2 0.55 0.31 -0.3
58 AT1G53000 Nucleotide-diphospho-sugar transferases superfamily protein AtCKS, CMP-KDO synthetase, KDSB 0.55 0.34 -0.32
59 AT1G54040 epithiospecifier protein epithiospecifier protein,
EPITHIOSPECIFYING SENESCENCE
REGULATOR, TASTY		 -0.55 0.33 -0.31
60 AT4G08790 Nitrilase/cyanide hydratase and apolipoprotein
N-acyltransferase family protein		 -0.55 0.32 -0.33
61 AT1G49950 telomere repeat binding factor 1 TELOMERE REPEAT BINDING FACTOR 1,
telomere repeat binding factor 1		 0.55 0.32 -0.32
62 AT1G67550 urease urease 0.55 0.32 -0.32
63 AT4G31570 CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G24460.1); Has 194354 Blast hits to 66887 proteins
in 3244 species: Archae - 3688; Bacteria - 38556; Metazoa -
84828; Fungi - 17265; Plants - 10589; Viruses - 805; Other
Eukaryotes - 38623 (source: NCBI BLink).		 -0.55 0.31 -0.32
64 AT1G50290 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.55 0.3 -0.32
65 AT5G28030 L-cysteine desulfhydrase 1 L-cysteine desulfhydrase 1 -0.55 0.32 -0.32
66 AT1G71340 PLC-like phosphodiesterases superfamily protein AtGDPD4, glycerophosphodiester
phosphodiesterase 4		 0.54 0.31 -0.31
67 AT4G30820 cyclin-dependent kinase-activating kinase assembly
factor-related / CDK-activating kinase assembly
factor-related		 -0.54 0.3 -0.32
68 AT5G35840 phytochrome C phytochrome C 0.54 0.31 -0.3
69 AT5G37630 ARM repeat superfamily protein EMBRYO DEFECTIVE 2656 0.54 0.32 -0.32
70 AT1G68930 pentatricopeptide (PPR) repeat-containing protein 0.53 0.32 -0.29
71 AT1G14800 Nucleic acid-binding, OB-fold-like protein 0.53 0.33 -0.3
72 AT1G65370 TRAF-like family protein 0.53 0.32 -0.3
73 AT4G35230 BR-signaling kinase 1 BR-signaling kinase 1 -0.52 0.31 -0.3
74 ATMG01350 hypothetical protein ORF145C -0.52 0.31 -0.33
75 AT5G18840 Major facilitator superfamily protein -0.52 0.31 -0.32
76 AT3G30180 brassinosteroid-6-oxidase 2 brassinosteroid-6-oxidase 2,
CYP85A2		 -0.52 0.32 -0.31
77 AT5G05760 syntaxin of plants 31 ATSED5, ATSYP31, T-SNARE SED 5,
syntaxin of plants 31		 0.52 0.3 -0.32
78 AT1G64960 ARM repeat superfamily protein hypersensitive to excess boron 1 0.52 0.27 -0.32
79 AT5G25880 NADP-malic enzyme 3 Arabidopsis thaliana NADP-malic
enzyme 3, NADP-malic enzyme 3		 0.51 0.31 -0.31
80 AT4G12460 OSBP(oxysterol binding protein)-related protein 2B OSBP(oxysterol binding
protein)-related protein 2B		 0.51 0.33 -0.31
81 AT5G20620 ubiquitin 4 ubiquitin 4 -0.51 0.32 -0.31
82 AT4G33970 Leucine-rich repeat (LRR) family protein -0.51 0.34 -0.31
83 AT5G23340 RNI-like superfamily protein -0.49 0.31 -0.31
84 AT5G14340 myb domain protein 40 myb domain protein 40, myb domain
protein 40		 -0.47 0.33 -0.33
85 AT1G70570 anthranilate phosphoribosyltransferase, putative -0.46 0.32 -0.31
86 AT4G36480 long-chain base1 long-chain base1, EMBRYO DEFECTIVE
2779, FUMONISIN B1 RESISTANT 11,
long-chain base1		 -0.46 0.32 -0.3
87 AT4G35540 zinc ion binding;transcription regulators -0.43 0.33 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
88 C0244 Sucrose D-Sucrose Sucrose stachyose biosynthesis,
fructan degradation,
stachyose degradation,
galactose degradation III,
superpathway of sucrose and starch metabolism II (photosynthetic tissue),
sucrose degradation III,
UDP-glucose biosynthesis (from sucrose),
ajugose biosynthesis II (galactinol-independent),
sucrose biosynthesis I 		0.76 0.31 -0.31 C0244
89 C0124 Isonicotinic acid - - - -0.67 0.46 -0.45
90 C0034 4-Methylthio-n-butylglucosinolate - 4-Methylthiobutyl glucosinolate glucosinolate biosynthesis from dihomomethionine 0.67 0.31 -0.32 C0034
91 C0037 5-Methylsulfinyl-n-pentylglucosinolate - 5-Methylsulfinylpentyl glucosinolate glucosinolate biosynthesis from trihomomethionine 0.56 0.33 -0.34 C0037