AT4G12390 : pectin methylesterase inhibitor 1
Query Information
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AGICode AT4G12390
Description pectin methylesterase inhibitor 1
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G12390 pectin methylesterase inhibitor 1 pectin methylesterase inhibitor 1 1 0.31 -0.31
2 AT4G11460 cysteine-rich RLK (RECEPTOR-like protein kinase) 30 cysteine-rich RLK (RECEPTOR-like
protein kinase) 30		 0.87 0.33 -0.29
3 AT4G27730 oligopeptide transporter 1 ARABIDOPSIS THALIANA OLIGOPEPTIDE
TRANSPORTER 6, oligopeptide
transporter 1		 0.85 0.29 -0.31
4 AT5G44130 FASCICLIN-like arabinogalactan protein 13 precursor FASCICLIN-like arabinogalactan
protein 13 precursor		 0.84 0.32 -0.29
5 AT4G00710 BR-signaling kinase 3 BR-signaling kinase 3 0.84 0.32 -0.32
6 AT4G21870 HSP20-like chaperones superfamily protein 0.84 0.32 -0.33
7 AT2G45180 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.83 0.32 -0.31
8 AT4G37450 arabinogalactan protein 18 arabinogalactan protein 18,
ATAGP18		 0.81 0.32 -0.32
9 AT3G07270 GTP cyclohydrolase I 0.8 0.32 -0.32
10 AT2G18910 hydroxyproline-rich glycoprotein family protein 0.8 0.33 -0.31
11 AT2G39050 hydroxyproline-rich glycoprotein family protein ArathEULS3, Euonymus lectin S3 -0.79 0.32 -0.31
12 AT1G73480 alpha/beta-Hydrolases superfamily protein -0.79 0.32 -0.31
13 AT1G24280 glucose-6-phosphate dehydrogenase 3 glucose-6-phosphate dehydrogenase
3		 0.79 0.3 -0.3
14 AT3G05880 Low temperature and salt responsive protein family RARE-COLD-INDUCIBLE 2A -0.79 0.32 -0.32
15 AT1G48960 Adenine nucleotide alpha hydrolases-like superfamily
protein		 0.79 0.3 -0.31
16 AT3G28007 Nodulin MtN3 family protein AtSWEET4, SWEET4 -0.79 0.29 -0.31
17 AT2G23130 arabinogalactan protein 17 arabinogalactan protein 17,
ATAGP17		 0.79 0.32 -0.31
18 AT2G23350 poly(A) binding protein 4 poly(A) binding protein 4, POLY(A)
BINDING PROTEIN 4		 0.79 0.31 -0.31
19 AT1G23030 ARM repeat superfamily protein 0.79 0.29 -0.32
20 AT4G18800 RAB GTPase homolog A1D ATHSGBP, ATRAB11B, RAB GTPase
homolog A1D, RAB GTPase homolog
A1D		 0.78 0.32 -0.31
21 AT1G07140 Pleckstrin homology (PH) domain superfamily protein SIRANBP 0.78 0.33 -0.34
22 AT1G58360 amino acid permease 1 amino acid permease 1, NEUTRAL
AMINO ACID TRANSPORTER 2		 -0.78 0.33 -0.31
23 AT4G34750 SAUR-like auxin-responsive protein family 0.78 0.31 -0.32
24 AT5G65650 Protein of unknown function (DUF1195) 0.78 0.32 -0.32
25 AT3G14440 nine-cis-epoxycarotenoid dioxygenase 3 ATNCED3, nine-cis-epoxycarotenoid
dioxygenase 3, SUGAR INSENSITIVE
7, SALT TOLERANT 1		 -0.78 0.31 -0.31
26 AT5G57050 Protein phosphatase 2C family protein ABA INSENSITIVE 2, AtABI2 -0.78 0.32 -0.32
27 AT1G04040 HAD superfamily, subfamily IIIB acid phosphatase 0.78 0.32 -0.3
28 AT2G43140 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.77 0.29 -0.31
29 AT1G67300 Major facilitator superfamily protein -0.77 0.33 -0.31
30 AT5G05420 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.77 0.33 -0.33
31 AT2G45440 dihydrodipicolinate synthase dihydrodipicolinate synthase 0.77 0.31 -0.33
32 AT1G09780 Phosphoglycerate mutase,
2,3-bisphosphoglycerate-independent		 2,3-biphosphoglycerate-independent
phosphoglycerate mutase 1		 0.77 0.31 -0.32
33 AT4G37540 LOB domain-containing protein 39 LOB domain-containing protein 39 0.77 0.33 -0.33
34 AT3G15880 WUS-interacting protein 2 TOPLESS-RELATED 4, WUS-interacting
protein 2		 -0.77 0.31 -0.34
35 AT1G14710 hydroxyproline-rich glycoprotein family protein 0.76 0.31 -0.3
36 AT5G45480 Protein of unknown function (DUF594) 0.76 0.29 -0.3
37 AT1G28960 nudix hydrolase homolog 15 ARABIDOPSIS THALIANA NUDIX
HYDROLASE HOMOLOG 15, nudix
hydrolase homolog 15, nudix
hydrolase homolog 15		 -0.76 0.32 -0.33
38 AT2G40460 Major facilitator superfamily protein -0.76 0.3 -0.29
39 AT5G63100 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.76 0.33 -0.32
40 AT1G51140 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.76 0.29 -0.3
41 AT1G76590 PLATZ transcription factor family protein -0.75 0.33 -0.32
42 AT1G15810 S15/NS1, RNA-binding protein 0.75 0.33 -0.3
43 AT1G65840 polyamine oxidase 4 polyamine oxidase 4, polyamine
oxidase 4		 0.75 0.31 -0.31
44 AT3G17390 S-adenosylmethionine synthetase family protein METHIONINE ADENOSYLTRANSFERASE 4,
METHIONINE OVER-ACCUMULATOR 3,
S-ADENOSYLMETHIONINE SYNTHETASE 3		 0.75 0.32 -0.3
45 AT4G17890 ARF-GAP domain 8 ARF-GAP domain 8 0.75 0.34 -0.3
46 AT5G43910 pfkB-like carbohydrate kinase family protein 0.75 0.32 -0.31
47 AT5G64000 Inositol monophosphatase family protein ATSAL2, SAL2 0.75 0.31 -0.33
48 AT5G01990 Auxin efflux carrier family protein -0.75 0.31 -0.34
49 AT3G14840 Leucine-rich repeat transmembrane protein kinase 0.75 0.31 -0.32
50 AT2G33330 plasmodesmata-located protein 3 plasmodesmata-located protein 3 0.75 0.31 -0.32
51 AT1G76990 ACT domain repeat 3 ACT domain repeat 3 0.75 0.32 -0.33
52 AT3G29575 ABI five binding protein 3 ABI five binding protein 3 -0.75 0.31 -0.29
53 AT4G17870 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 PYRABACTIN RESISTANCE 1,
regulatory component of ABA
receptor 11		 0.75 0.32 -0.32
54 AT5G14040 phosphate transporter 3;1 phosphate transporter 3;1 0.75 0.34 -0.34
55 AT3G51895 sulfate transporter 3;1 AST12, sulfate transporter 3;1 -0.75 0.3 -0.31
56 AT3G20300 Protein of unknown function (DUF3537) -0.75 0.31 -0.31
57 AT1G77450 NAC domain containing protein 32 NAC domain containing protein 32,
NAC domain containing protein 32		 -0.74 0.32 -0.32
58 AT1G11680 CYTOCHROME P450 51G1 CYTOCHROME P450 51, CYTOCHROME
P450 51A2, CYTOCHROME P450 51G1,
embryo defective 1738		 0.74 0.32 -0.33
59 AT1G05700 Leucine-rich repeat transmembrane protein kinase protein 0.74 0.3 -0.3
60 AT2G46270 G-box binding factor 3 G-box binding factor 3 -0.74 0.3 -0.32
61 AT4G17070 peptidyl-prolyl cis-trans isomerases 0.74 0.34 -0.3
62 AT4G01720 WRKY family transcription factor AtWRKY47, WRKY47 0.74 0.34 -0.32
63 AT3G02910 AIG2-like (avirulence induced gene) family protein 0.74 0.3 -0.31
64 AT2G22170 Lipase/lipooxygenase, PLAT/LH2 family protein 0.74 0.33 -0.31
65 AT4G02280 sucrose synthase 3 ATSUS3, sucrose synthase 3 -0.74 0.31 -0.31
66 AT2G43130 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ARA-4, ARA4, ATRAB11F, ARABIDOPSIS
RAB GTPASE HOMOLOG A5C, RABA5C		 0.74 0.32 -0.33
67 AT5G62000 auxin response factor 2 ARF1-BINDING PROTEIN, auxin
response factor 2, HLS1
SUPPRESSOR, ORESARA 14		 -0.74 0.34 -0.3
68 AT2G44370 Cysteine/Histidine-rich C1 domain family protein 0.74 0.32 -0.32
69 AT3G46820 type one serine/threonine protein phosphatase 5 type one serine/threonine protein
phosphatase 5		 0.74 0.31 -0.31
70 AT5G49710 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G24590.1); Has 35333 Blast
hits to 34131 proteins in 2444 species: Archae - 798;
Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531;
Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).		 -0.73 0.31 -0.32
71 AT2G22010 related to KPC1 related to KPC1 -0.73 0.3 -0.3
72 AT5G12140 cystatin-1 cystatin-1, cystatin-1 -0.73 0.3 -0.29
73 AT1G27340 Galactose oxidase/kelch repeat superfamily protein 0.73 0.3 -0.33
74 AT1G05840 Eukaryotic aspartyl protease family protein -0.73 0.33 -0.29
75 AT3G14310 pectin methylesterase 3 pectin methylesterase 3, pectin
methylesterase 3		 0.73 0.33 -0.3
76 AT1G29395 COLD REGULATED 314 INNER MEMBRANE 1 COLD REGULATED 314 THYLAKOID
MEMBRANE 1, COLD REGULATED 314
INNER MEMBRANE 1, cold regulated
414 thylakoid membrane 1		 -0.73 0.32 -0.32
77 AT2G44380 Cysteine/Histidine-rich C1 domain family protein 0.73 0.32 -0.34
78 AT2G17990 BEST Arabidopsis thaliana protein match is:
kinectin-related (TAIR:AT5G66250.3); Has 7578 Blast hits to
6129 proteins in 783 species: Archae - 220; Bacteria -
1045; Metazoa - 3605; Fungi - 575; Plants - 442; Viruses -
38; Other Eukaryotes - 1653 (source: NCBI BLink).		 -0.73 0.32 -0.31
79 AT3G25540 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing
protein		 LONGEVITY ASSURANCE GENE 1 0.73 0.32 -0.32
80 AT5G44020 HAD superfamily, subfamily IIIB acid phosphatase 0.73 0.34 -0.32
81 AT1G24530 Transducin/WD40 repeat-like superfamily protein 0.73 0.32 -0.33
82 AT1G14210 Ribonuclease T2 family protein 0.73 0.3 -0.31
83 AT4G13550 triglyceride lipases;triglyceride lipases -0.72 0.31 -0.33
84 AT3G02350 galacturonosyltransferase 9 galacturonosyltransferase 9 0.72 0.3 -0.28
85 AT5G20250 Raffinose synthase family protein DARK INDUCIBLE 10, raffinose
synthase 6		 0.72 0.31 -0.35
86 AT1G62480 Vacuolar calcium-binding protein-related 0.72 0.33 -0.3
87 AT5G20640 Protein of unknown function (DUF567) 0.72 0.33 -0.31
88 AT5G52660 Homeodomain-like superfamily protein -0.72 0.33 -0.32
89 AT1G76380 DNA-binding bromodomain-containing protein -0.72 0.31 -0.32
90 AT1G64970 gamma-tocopherol methyltransferase gamma-tocopherol
methyltransferase, TMT1, VITAMIN E
DEFICIENT 4		 -0.72 0.33 -0.31
91 AT1G18710 myb domain protein 47 myb domain protein 47, myb domain
protein 47		 -0.72 0.31 -0.31
92 AT1G12010 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.72 0.33 -0.31
93 AT4G21410 cysteine-rich RLK (RECEPTOR-like protein kinase) 29 cysteine-rich RLK (RECEPTOR-like
protein kinase) 29		 0.72 0.31 -0.34
94 AT2G31730 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.72 0.32 -0.3
95 AT5G58720 smr (Small MutS Related) domain-containing protein -0.72 0.33 -0.33
96 AT1G51790 Leucine-rich repeat protein kinase family protein 0.72 0.33 -0.31
97 AT4G25110 metacaspase 2 metacaspase 2, metacaspase 1c,
metacaspase 2, metacaspase 1c		 0.72 0.33 -0.34
98 AT3G16800 Protein phosphatase 2C family protein -0.71 0.3 -0.32
99 AT1G34020 Nucleotide-sugar transporter family protein 0.71 0.31 -0.34
100 AT3G57300 INO80 ortholog INO80 ORTHOLOG, INO80 ortholog -0.71 0.32 -0.33
101 AT3G07360 plant U-box 9 ARABIDOPSIS THALIANA PLANT U-BOX
9, plant U-box 9		 -0.71 0.32 -0.31
102 AT4G20840 FAD-binding Berberine family protein 0.71 0.3 -0.32
103 AT2G43500 Plant regulator RWP-RK family protein -0.71 0.34 -0.34
104 AT3G22750 Protein kinase superfamily protein 0.71 0.31 -0.31
105 AT5G62020 heat shock transcription factor B2A ARABIDOPSIS THALIANA HEAT SHOCK
TRANSCRIPTION FACTOR B2A, heat
shock transcription factor B2A		 -0.71 0.33 -0.32
106 AT5G55630 Outward rectifying potassium channel protein ATKCO1, TANDEM PORE K+ CHANNEL 1,
CA2+ ACTIVATED OUTWARD RECTIFYING
K+ CHANNEL 1, TWO PORE K CHANNEL,
TWO PORE K CHANNEL 1		 0.71 0.29 -0.31
107 AT1G55110 indeterminate(ID)-domain 7 indeterminate(ID)-domain 7,
indeterminate(ID)-domain 7		 -0.71 0.31 -0.34
108 AT5G59160 type one serine/threonine protein phosphatase 2 PROTOPORPHYRINOGEN OXIDASE, type
one serine/threonine protein
phosphatase 2		 0.71 0.33 -0.3
109 AT5G60710 Zinc finger (C3HC4-type RING finger) family protein 0.71 0.33 -0.3
110 AT4G32770 tocopherol cyclase, chloroplast / vitamin E deficient 1
(VTE1) / sucrose export defective 1 (SXD1)		 SUCROSE EXPORT DEFECTIVE 1,
VITAMIN E DEFICIENT 1		 -0.71 0.31 -0.29
111 AT3G27620 alternative oxidase 1C alternative oxidase 1C 0.71 0.3 -0.32
112 AT2G24580 FAD-dependent oxidoreductase family protein 0.71 0.3 -0.32
113 AT2G30060 Pleckstrin homology (PH) domain superfamily protein 0.71 0.31 -0.31
114 AT5G53160 regulatory components of ABA receptor 3 PYR1-like 8, regulatory components
of ABA receptor 3		 0.71 0.34 -0.31
115 AT2G01460 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.7 0.32 -0.33
116 AT1G51090 Heavy metal transport/detoxification superfamily protein -0.7 0.33 -0.31
117 AT5G06760 Late Embryogenesis Abundant 4-5 Late Embryogenesis Abundant 4-5,
Late Embryogenesis Abundant 4-5		 -0.7 0.35 -0.31
118 AT4G36830 GNS1/SUR4 membrane protein family HOS3-1 -0.7 0.3 -0.32
119 AT4G35790 phospholipase D delta ARABIDOPSIS THALIANA PHOSPHOLIPASE
D DELTA, phospholipase D delta		 -0.7 0.32 -0.3
120 AT2G24420 DNA repair ATPase-related -0.7 0.33 -0.34
121 AT2G39450 Cation efflux family protein ATMTP11, MTP11 -0.7 0.31 -0.31
122 AT3G28220 TRAF-like family protein -0.7 0.33 -0.32
123 AT5G04370 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 NAMT1 -0.69 0.31 -0.32
124 AT1G67310 Calmodulin-binding transcription activator protein with
CG-1 and Ankyrin domains		 -0.69 0.33 -0.33
125 AT2G47180 galactinol synthase 1 galactinol synthase 1, galactinol
synthase 1		 -0.69 0.32 -0.32
126 AT1G04830 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.68 0.33 -0.32
127 AT1G34120 inositol polyphosphate 5-phosphatase I AT5P1, MYO-INOSITOL POLYPHOSPHATE
5-PHOSPHATASE 1, ATIP5PI, inositol
polyphosphate 5-phosphatase I		 -0.68 0.31 -0.31
128 AT1G76350 Plant regulator RWP-RK family protein -0.68 0.32 -0.32
129 AT1G62430 CDP-diacylglycerol synthase 1 CDP-diacylglycerol synthase 1,
CDP-diacylglycerol synthase 1		 -0.68 0.3 -0.3
130 AT1G69260 ABI five binding protein ABI five binding protein -0.68 0.31 -0.32
131 AT2G32090 Lactoylglutathione lyase / glyoxalase I family protein -0.68 0.3 -0.33
132 AT1G60470 galactinol synthase 4 galactinol synthase 4, galactinol
synthase 4		 -0.68 0.31 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
133 C0210 Phytol E-Phytol Phytol chlorophyll a degradation II,
chlorophyll a degradation,
phytol salvage pathway 		-0.73 0.44 -0.43 C0210
134 C0107 Glycine - Glycine 5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
folate polyglutamylation,
gamma-glutamyl cycle (plant pathway),
glutathione biosynthesis,
glutathione-mediated detoxification II,
folate transformations II,
indole glucosinolate breakdown (active in intact plant cell),
glycine cleavage complex,
camalexin biosynthesis,
thiamine biosynthesis II,
tRNA charging,
glycine biosynthesis,
glutathione degradation,
photorespiration 		-0.72 0.42 -0.45 C0107