AT4G05390 : root FNR 1
Query Information
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AGICode AT4G05390
Description root FNR 1
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G05390 root FNR 1 root FNR 1, root FNR 1 1 0.32 -0.32
2 AT1G77840 Translation initiation factor IF2/IF5 0.81 0.33 -0.32
3 AT4G21410 cysteine-rich RLK (RECEPTOR-like protein kinase) 29 cysteine-rich RLK (RECEPTOR-like
protein kinase) 29		 0.8 0.32 -0.32
4 AT3G48990 AMP-dependent synthetase and ligase family protein 0.78 0.3 -0.32
5 AT4G25480 dehydration response element B1A ATCBF3, C-REPEAT BINDING FACTOR
3, dehydration response element
B1A		 -0.76 0.31 -0.32
6 AT4G18270 translocase 11 ARABIDOPSIS THALIANA TRANSLOCASE
11, translocase 11		 -0.76 0.32 -0.29
7 AT4G35300 tonoplast monosaccharide transporter2 tonoplast monosaccharide
transporter2		 -0.74 0.3 -0.33
8 AT1G27980 dihydrosphingosine phosphate lyase ATDPL1, dihydrosphingosine
phosphate lyase		 0.73 0.3 -0.32
9 AT5G52310 low-temperature-responsive protein 78 (LTI78) /
desiccation-responsive protein 29A (RD29A)		 COLD REGULATED 78, LTI140,
LOW-TEMPERATURE-INDUCED 78,
RESPONSIVE TO DESSICATION 29A		 -0.73 0.31 -0.31
10 AT3G27190 uridine kinase-like 2 uridine kinase-like 2 0.73 0.3 -0.31
11 AT5G64080 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 AtXYP1, xylogen protein 1 -0.73 0.31 -0.31
12 AT1G78070 Transducin/WD40 repeat-like superfamily protein -0.73 0.32 -0.32
13 AT5G14120 Major facilitator superfamily protein 0.72 0.31 -0.34
14 AT5G53480 ARM repeat superfamily protein 0.72 0.34 -0.33
15 AT5G19180 E1 C-terminal related 1 E1 C-terminal related 1 0.72 0.32 -0.33
16 AT4G38250 Transmembrane amino acid transporter family protein 0.72 0.33 -0.33
17 AT5G66380 folate transporter 1 folate transporter 1, folate
transporter 1		 0.72 0.31 -0.31
18 AT5G43170 zinc-finger protein 3 zinc-finger protein 3, zinc-finger
protein 3		 0.71 0.33 -0.32
19 AT4G34770 SAUR-like auxin-responsive protein family 0.71 0.31 -0.33
20 AT4G36860 LIM domain-containing protein DA1-RELATED PROTEIN 1 0.71 0.31 -0.32
21 AT2G42540 cold-regulated 15a COR15, cold-regulated 15a -0.71 0.31 -0.3
22 AT5G01210 HXXXD-type acyl-transferase family protein 0.71 0.33 -0.31
23 AT2G42280 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.71 0.29 -0.31
24 AT3G13760 Cysteine/Histidine-rich C1 domain family protein 0.7 0.31 -0.31
25 AT1G16850 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to salt stress; LOCATED IN:
endomembrane system; EXPRESSED IN: leaf apex, leaf whorl,
male gametophyte, flower, leaf; EXPRESSED DURING: LP.06 six
leaves visible, LP.04 four leaves visible, LP.10 ten leaves
visible, petal differentiation and expansion stage, LP.08
eight leaves visible; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G64820.1); Has 24 Blast
hits to 24 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.7 0.31 -0.29
26 AT5G13110 glucose-6-phosphate dehydrogenase 2 glucose-6-phosphate dehydrogenase
2		 0.69 0.31 -0.32
27 AT2G15970 cold regulated 413 plasma membrane 1 ARABIDOPSIS THALIANA
COLD-REGULATED413 PLASMA MEMBRANE
1, CYCLOPHILLIN 19, cold regulated
413 plasma membrane 1, FL3-5A3,
WCOR413, WCOR413-LIKE		 -0.69 0.33 -0.32
28 AT4G17070 peptidyl-prolyl cis-trans isomerases 0.69 0.31 -0.33
29 AT1G20450 Dehydrin family protein EARLY RESPONSIVE TO DEHYDRATION
10, LOW TEMPERATURE INDUCED 29,
LOW TEMPERATURE INDUCED 45		 -0.69 0.31 -0.31
30 AT2G42530 cold regulated 15b cold regulated 15b -0.68 0.34 -0.3
31 AT5G10290 leucine-rich repeat transmembrane protein kinase family
protein		 0.68 0.33 -0.32
32 AT5G05710 Pleckstrin homology (PH) domain superfamily protein 0.68 0.32 -0.31
33 AT5G60590 DHBP synthase RibB-like alpha/beta domain 0.68 0.3 -0.31
34 AT2G17440 plant intracellular ras group-related LRR 5 plant intracellular ras
group-related LRR 5		 0.68 0.32 -0.33
35 AT1G22160 Protein of unknown function (DUF581) -0.68 0.32 -0.33
36 AT1G64890 Major facilitator superfamily protein -0.68 0.32 -0.34
37 AT1G68470 Exostosin family protein -0.68 0.32 -0.29
38 AT4G21400 cysteine-rich RLK (RECEPTOR-like protein kinase) 28 cysteine-rich RLK (RECEPTOR-like
protein kinase) 28		 0.67 0.33 -0.33
39 AT1G21910 Integrase-type DNA-binding superfamily protein dehydration response
element-binding protein 26		 0.67 0.33 -0.34
40 AT5G47020 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G11700.2); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.67 0.32 -0.31
41 AT3G06720 importin alpha isoform 1 IMPORTIN ALPHA, AT-IMP, ATKAP
ALPHA, importin alpha isoform 1,
IMPORTIN ALPHA ISOFORM 1		 0.67 0.32 -0.31
42 AT1G56600 galactinol synthase 2 galactinol synthase 2, galactinol
synthase 2		 -0.67 0.29 -0.3
43 AT1G54730 Major facilitator superfamily protein 0.67 0.33 -0.31
44 AT3G01640 glucuronokinase G ARABIDOPSIS THALIANA
GLUCURONOKINASE, glucuronokinase G		 0.67 0.31 -0.3
45 AT5G56360 calmodulin-binding protein PRIORITY IN SWEET LIFE 4 0.67 0.32 -0.32
46 AT5G40850 urophorphyrin methylase 1 urophorphyrin methylase 1 0.67 0.31 -0.31
47 AT3G20330 PYRIMIDINE B PYRIMIDINE B 0.66 0.3 -0.31
48 AT5G55500 beta-1,2-xylosyltransferase ARABIDOPSIS THALIANA
BETA-1,2-XYLOSYLTRANSFERASE,
beta-1,2-xylosyltransferase		 0.66 0.31 -0.32
49 AT1G70230 TRICHOME BIREFRINGENCE-LIKE 27 ALTERED XYLOGLUCAN 4, TRICHOME
BIREFRINGENCE-LIKE 27		 0.66 0.33 -0.31
50 AT1G60190 ARM repeat superfamily protein AtPUB19, plant U-box 19 -0.66 0.32 -0.3
51 AT1G65930 cytosolic NADP+-dependent isocitrate dehydrogenase cytosolic NADP+-dependent
isocitrate dehydrogenase		 0.66 0.32 -0.3
52 AT2G18230 pyrophosphorylase 2 pyrophosphorylase 2,
pyrophosphorylase 2		 -0.66 0.32 -0.34
53 AT5G01370 ALC-interacting protein 1 ALC-interacting protein 1 -0.66 0.32 -0.33
54 AT4G16210 enoyl-CoA hydratase/isomerase A ENOYL-COA HYDRATASE 2, enoyl-CoA
hydratase/isomerase A		 0.66 0.33 -0.32
55 AT5G23020 2-isopropylmalate synthase 2 2-isopropylmalate synthase 2,
METHYLTHIOALKYMALATE
SYNTHASE-LIKE, MAM3		 0.66 0.32 -0.32
56 AT4G02630 Protein kinase superfamily protein -0.66 0.3 -0.31
57 AT2G22490 Cyclin D2;1 ATCYCD2;1, Cyclin D2;1 0.66 0.31 -0.32
58 AT1G11200 Protein of unknown function (DUF300) 0.66 0.3 -0.32
59 AT3G55760 unknown protein; LOCATED IN: chloroplast stroma,
chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED
DURING: 10 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G42430.2); Has 176 Blast
hits to 125 proteins in 40 species: Archae - 0; Bacteria -
3; Metazoa - 19; Fungi - 9; Plants - 81; Viruses - 0; Other
Eukaryotes - 64 (source: NCBI BLink).		 -0.65 0.32 -0.31
60 AT1G20440 cold-regulated 47 AtCOR47, cold-regulated 47, RD17 -0.65 0.31 -0.33
61 AT5G14640 shaggy-like kinase 13 SHAGGY-LIKE KINASE 13, shaggy-like
kinase 13		 -0.65 0.32 -0.32
62 AT5G35700 fimbrin-like protein 2 fimbrin-like protein 2, FIMBRIN5 0.65 0.33 -0.3
63 AT5G37500 gated outwardly-rectifying K+ channel gated outwardly-rectifying K+
channel		 -0.65 0.33 -0.3
64 AT2G16990 Major facilitator superfamily protein -0.65 0.3 -0.32
65 AT2G20280 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.65 0.34 -0.31
66 AT3G53110 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 LOW EXPRESSION OF OSMOTICALLY
RESPONSIVE GENES 4		 0.65 0.29 -0.31
67 AT4G24960 HVA22 homologue D ARABIDOPSIS THALIANA HVA22
HOMOLOGUE D, HVA22 homologue D		 -0.65 0.32 -0.32
68 AT5G39850 Ribosomal protein S4 0.65 0.33 -0.32
69 AT2G24580 FAD-dependent oxidoreductase family protein 0.65 0.31 -0.32
70 AT5G44670 Domain of unknown function (DUF23) -0.65 0.3 -0.32
71 AT3G18160 peroxin 3-1 peroxin 3-1 -0.65 0.3 -0.32
72 AT5G09220 amino acid permease 2 amino acid permease 2 -0.64 0.32 -0.32
73 AT1G21790 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing
protein		 -0.64 0.33 -0.3
74 AT5G17420 Cellulose synthase family protein ATCESA7, CELLULOSE SYNTHASE
CATALYTIC SUBUNIT 7, IRREGULAR
XYLEM 3, MURUS 10		 -0.64 0.32 -0.33
75 AT1G48100 Pectin lyase-like superfamily protein -0.64 0.33 -0.32
76 AT1G15040 Class I glutamine amidotransferase-like superfamily protein 0.64 0.32 -0.32
77 AT1G55810 uridine kinase-like 3 uridine kinase-like 3 0.64 0.29 -0.32
78 AT5G60270 Concanavalin A-like lectin protein kinase family protein 0.64 0.32 -0.31
79 AT1G72430 SAUR-like auxin-responsive protein family 0.64 0.33 -0.3
80 AT5G18830 squamosa promoter binding protein-like 7 SQUAMOSA PROMOTER BINDING
PROTEIN-LIKE 7, squamosa promoter
binding protein-like 7		 -0.64 0.32 -0.32
81 AT1G05180 NAD(P)-binding Rossmann-fold superfamily protein AUXIN RESISTANT 1 0.63 0.29 -0.3
82 AT3G15770 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G25360.2); Has 143 Blast hits
to 143 proteins in 25 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other
Eukaryotes - 7 (source: NCBI BLink).		 0.63 0.3 -0.32
83 AT1G28580 GDSL-like Lipase/Acylhydrolase superfamily protein 0.63 0.32 -0.33
84 AT3G13070 CBS domain-containing protein / transporter associated
domain-containing protein		 0.63 0.32 -0.3
85 AT4G02050 sugar transporter protein 7 sugar transporter protein 7 0.63 0.3 -0.32
86 AT1G21590 Protein kinase protein with adenine nucleotide alpha
hydrolases-like domain		 -0.63 0.32 -0.29
87 AT5G04590 sulfite reductase sulfite reductase 0.63 0.32 -0.31
88 AT1G71880 sucrose-proton symporter 1 ARABIDOPSIS THALIANA
SUCROSE-PROTON SYMPORTER 1,
sucrose-proton symporter 1		 0.63 0.31 -0.28
89 AT2G44080 ARGOS-like ARGOS-like 0.63 0.31 -0.31
90 AT3G15610 Transducin/WD40 repeat-like superfamily protein 0.62 0.32 -0.32
91 AT3G03340 LUC7 related protein unfertilized embryo sac 6 -0.62 0.33 -0.33
92 AT4G20840 FAD-binding Berberine family protein 0.62 0.29 -0.32
93 AT3G19370 Plant protein of unknown function (DUF869) -0.62 0.32 -0.34
94 AT2G35900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 13 growth stages; Has 32 Blast hits to 32 proteins
in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.62 0.32 -0.33
95 AT3G04350 Plant protein of unknown function (DUF946) 0.62 0.33 -0.29
96 AT1G31910 GHMP kinase family protein 0.62 0.31 -0.34
97 AT5G20990 molybdopterin biosynthesis CNX1 protein / molybdenum
cofactor biosynthesis enzyme CNX1 (CNX1)		 B73, CHLORATE RESISTANT 6,
CO-FACTOR FOR NITRATE REDUCTASE
AND XANTHINE DEHYDROGENASE,
CO-FACTOR FOR NITRATE REDUCTASE
AND XANTHINE DEHYDROGENASE 1,
SIRTINOL 4		 0.62 0.31 -0.32
98 AT1G19970 ER lumen protein retaining receptor family protein -0.62 0.3 -0.32
99 AT5G60460 Preprotein translocase Sec, Sec61-beta subunit protein 0.62 0.32 -0.32
100 AT1G12780 UDP-D-glucose/UDP-D-galactose 4-epimerase 1 A. THALIANA UDP-GLC 4-EPIMERASE 1,
UDP-D-glucose/UDP-D-galactose
4-epimerase 1		 0.61 0.33 -0.3
101 AT5G65470 O-fucosyltransferase family protein -0.61 0.31 -0.31
102 AT3G55560 AT-hook protein of GA feedback 2 AT-hook protein of GA feedback 2,
AT-hook motif nuclear-localized
protein 15		 0.61 0.31 -0.32
103 AT5G53530 vacuolar protein sorting 26A vacuolar protein sorting 26A 0.61 0.3 -0.28
104 AT5G54250 cyclic nucleotide-gated cation channel 4 cyclic nucleotide-gated cation
channel 4, cyclic nucleotide-gated
cation channel 4, DEFENSE, NO
DEATH 2, HLM1		 0.61 0.31 -0.33
105 AT5G04520 Protein of unknown function DUF455 0.61 0.3 -0.29
106 AT2G45530 RING/U-box superfamily protein -0.61 0.3 -0.3
107 AT2G38130 Acyl-CoA N-acyltransferases (NAT) superfamily protein ATMAK3 0.61 0.32 -0.3
108 AT3G47295 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 13 Blast hits to 13
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.61 0.3 -0.29
109 AT2G28550 related to AP2.7 related to AP2.7, TARGET OF EARLY
ACTIVATION TAGGED (EAT) 1		 -0.6 0.32 -0.33
110 AT5G62650 Tic22-like family protein 0.6 0.32 -0.3
111 AT4G39780 Integrase-type DNA-binding superfamily protein 0.6 0.31 -0.32
112 AT3G18850 lysophosphatidyl acyltransferase 5 lysophosphatidyl acyltransferase 5 -0.6 0.32 -0.31
113 AT1G02860 SPX (SYG1/Pho81/XPR1) domain-containing protein BENZOIC ACID HYPERSENSITIVE 1,
nitrogen limitation adaptation		 0.6 0.33 -0.32
114 AT2G31680 RAB GTPase homolog A5D RAB GTPase homolog A5D, RAB GTPase
homolog A5D		 0.6 0.3 -0.3
115 AT5G03690 Aldolase superfamily protein 0.6 0.31 -0.34
116 AT1G63420 Arabidopsis thaliana protein of unknown function (DUF821) -0.59 0.33 -0.31
117 AT4G22270 Protein of unknown function (DUF3537) ARABIDOPSIS MEMBRANE RELATED
BIGGER1, MEMBRANE RELATED BIGGER1		 -0.59 0.3 -0.3
118 AT5G35970 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.59 0.33 -0.33
119 AT3G17130 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.58 0.31 -0.3
120 AT3G19340 Protein of unknown function (DUF3754) -0.58 0.31 -0.3
121 AT2G02120 Scorpion toxin-like knottin superfamily protein LOW-MOLECULAR-WEIGHT CYSTEINE-RICH
70, PDF2.1		 -0.58 0.32 -0.3
122 AT5G13580 ABC-2 type transporter family protein ATP-binding cassette G6 -0.58 0.31 -0.32
123 AT1G50590 RmlC-like cupins superfamily protein -0.58 0.31 -0.32
124 AT4G23920 UDP-D-glucose/UDP-D-galactose 4-epimerase 2 UDP-GLC 4-EPIMERASE 2,
UDP-D-glucose/UDP-D-galactose
4-epimerase 2		 -0.58 0.33 -0.32
125 AT1G58270 TRAF-like family protein ZW9 -0.58 0.3 -0.3
126 AT5G42720 Glycosyl hydrolase family 17 protein -0.58 0.34 -0.33
127 AT5G38070 RING/FYVE/PHD zinc finger superfamily protein -0.58 0.33 -0.3
128 AT1G53080 Legume lectin family protein -0.58 0.3 -0.31
129 AT2G17840 Senescence/dehydration-associated protein-related EARLY-RESPONSIVE TO DEHYDRATION 7 -0.58 0.32 -0.34
130 AT3G44735 PHYTOSULFOKINE 3 PRECURSOR PHYTOSULFOKINE 3 PRECURSOR, PSK1,
PHYTOSULFOKINE 3 PRECURSOR		 -0.57 0.31 -0.33
131 AT5G20930 Protein kinase superfamily protein TOUSLED -0.57 0.32 -0.31
132 AT1G15940 Tudor/PWWP/MBT superfamily protein -0.57 0.32 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
133 C0023 1,6-Anhydro-β-glucose 1,6-Anhydro-β-D-glucose Levoglucosan - 0.72 0.47 -0.47 C0023
134 C0098 Glucose D-Glucose alpha-D-glucose; beta-D-glucose trehalose degradation II (trehalase),
indole glucosinolate breakdown (active in intact plant cell),
coumarin biosynthesis (via 2-coumarate),
glucosinolate biosynthesis from tryptophan,
sinapate ester biosynthesis,
GDP-glucose biosynthesis,
coniferin metabolism,
melibiose degradation,
indole glucosinolate breakdown (insect chewing induced) 		-0.57 0.3 -0.31 C0098