AT4G04890 : protodermal factor 2
Query Information
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AGICode AT4G04890
Description protodermal factor 2
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G04890 protodermal factor 2 protodermal factor 2 1 0.33 -0.31
2 AT4G21750 Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein		 MERISTEM LAYER 1 0.93 0.32 -0.3
3 AT2G26910 pleiotropic drug resistance 4 ATP-binding cassette G32,
PLEIOTROPIC DRUG RESISTANCE 4,
pleiotropic drug resistance 4,
PERMEABLE CUTICLE 1		 0.9 0.31 -0.3
4 AT3G14990 Class I glutamine amidotransferase-like superfamily protein DJ-1 homolog A, DJ-1 homolog A -0.89 0.3 -0.32
5 AT4G36360 beta-galactosidase 3 beta-galactosidase 3 0.88 0.32 -0.33
6 AT5G65410 homeobox protein 25 ARABIDOPSIS THALIANA HOMEOBOX
PROTEIN 25, homeobox protein 25,
ZINC FINGER HOMEODOMAIN 2, ZINC
FINGER HOMEODOMAIN 1		 0.88 0.32 -0.31
7 AT4G34220 Leucine-rich repeat protein kinase family protein 0.88 0.32 -0.33
8 AT3G04260 plastid transcriptionally active 3 PIGMENT DEFECTIVE 324, plastid
transcriptionally active 3		 0.88 0.3 -0.32
9 AT5G06750 Protein phosphatase 2C family protein -0.87 0.3 -0.31
10 AT2G14880 SWIB/MDM2 domain superfamily protein 0.87 0.31 -0.3
11 AT4G29060 elongation factor Ts family protein embryo defective 2726 0.86 0.32 -0.31
12 AT3G49670 Leucine-rich receptor-like protein kinase family protein BARELY ANY MERISTEM 2 0.86 0.33 -0.32
13 AT1G09750 Eukaryotic aspartyl protease family protein 0.86 0.32 -0.31
14 AT3G63140 chloroplast stem-loop binding protein of 41 kDa chloroplast stem-loop binding
protein of 41 kDa		 0.86 0.32 -0.3
15 AT4G31850 proton gradient regulation 3 proton gradient regulation 3 0.86 0.32 -0.32
16 AT5G08000 glucan endo-1,3-beta-glucosidase-like protein 3 glucan
endo-1,3-beta-glucosidase-like
protein 3, PLASMODESMATA
CALLOSE-BINDING PROTEIN 2		 0.85 0.3 -0.32
17 AT3G04290 Li-tolerant lipase 1 ATLTL1, Li-tolerant lipase 1 0.85 0.3 -0.3
18 AT5G64580 AAA-type ATPase family protein EMBRYO DEFECTIVE 3144 0.85 0.31 -0.3
19 AT3G09270 glutathione S-transferase TAU 8 glutathione S-transferase TAU 8,
glutathione S-transferase TAU 8		 -0.84 0.33 -0.32
20 AT5G42765 INVOLVED IN: biological_process unknown; LOCATED IN:
thylakoid, chloroplast thylakoid membrane, chloroplast;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Twin-arginine
translocation pathway, signal sequence
(InterPro:IPR006311); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.84 0.32 -0.31
21 AT3G28040 Leucine-rich receptor-like protein kinase family protein 0.84 0.32 -0.32
22 AT1G63680 acid-amino acid ligases;ligases;ATP binding;ATP
binding;ligases		 ALBINO OR PALE-GREEN 13, ATMURE,
MURE, PIGMENT DEFECTIVE EMBRYO 316		 0.84 0.31 -0.31
23 AT1G21810 Plant protein of unknown function (DUF869) 0.84 0.33 -0.33
24 AT5G18460 Protein of Unknown Function (DUF239) 0.84 0.32 -0.32
25 AT3G58070 C2H2 and C2HC zinc fingers superfamily protein GLABROUS INFLORESCENCE STEMS 0.84 0.31 -0.31
26 AT3G49650 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.84 0.3 -0.31
27 AT3G48110 glycine-tRNA ligases EDD, EMBRYO-DEFECTIVE-DEVELOPMENT
1		 0.84 0.31 -0.31
28 AT2G37630 myb-like HTH transcriptional regulator family protein ASYMMETRIC LEAVES 1, MYB DOMAIN
PROTEIN 91, ARABIDOPSIS
PHANTASTICA-LIKE 1, MYB DOMAIN
PROTEIN 91		 0.84 0.31 -0.31
29 AT1G80030 Molecular chaperone Hsp40/DnaJ family protein 0.84 0.32 -0.33
30 AT1G51570 Calcium-dependent lipid-binding (CaLB domain) plant
phosphoribosyltransferase family protein		 0.84 0.32 -0.32
31 AT1G60800 NSP-interacting kinase 3 NSP-interacting kinase 3 0.83 0.31 -0.31
32 AT2G47940 DEGP protease 2 DEGP protease 2, EMBRYO DEFECTIVE
3117		 0.83 0.33 -0.31
33 AT4G39330 cinnamyl alcohol dehydrogenase 9 ATCAD9, cinnamyl alcohol
dehydrogenase 9		 0.83 0.31 -0.31
34 AT3G14330 Tetratricopeptide repeat (TPR)-like superfamily protein 0.83 0.3 -0.33
35 AT3G59420 crinkly4 crinkly4, crinkly4 0.82 0.32 -0.32
36 AT5G01240 like AUXIN RESISTANT 1 like AUXIN RESISTANT 1 0.82 0.33 -0.31
37 AT4G23740 Leucine-rich repeat protein kinase family protein 0.82 0.31 -0.31
38 AT3G43610 Spc97 / Spc98 family of spindle pole body (SBP) component 0.82 0.31 -0.33
39 AT5G06270 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 11 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G11600.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.82 0.3 -0.31
40 AT1G72970 Glucose-methanol-choline (GMC) oxidoreductase family
protein		 embryo sac development arrest 17,
HOTHEAD		 0.82 0.32 -0.32
41 AT4G35920 PLAC8 family protein mid1-complementing activity 1 0.82 0.3 -0.32
42 AT4G38770 proline-rich protein 4 ARABIDOPSIS THALIANA PROLINE-RICH
PROTEIN 4, proline-rich protein 4		 0.82 0.31 -0.32
43 AT5G14090 unknown protein; Has 56 Blast hits to 56 proteins in 18
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2;
Plants - 46; Viruses - 0; Other Eukaryotes - 8 (source:
NCBI BLink).		 0.81 0.3 -0.33
44 AT5G63420 RNA-metabolising metallo-beta-lactamase family protein embryo defective 2746 0.81 0.3 -0.31
45 AT5G55540 tornado 1 LOPPED 1, TORNADO 1 0.81 0.32 -0.29
46 AT5G42130 Mitochondrial substrate carrier family protein AtMfl1, MitoFerrinLike1 0.81 0.3 -0.32
47 AT1G10850 Leucine-rich repeat protein kinase family protein 0.81 0.32 -0.31
48 AT3G12760 CONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation
protein (InterPro:IPR014764), Protein of unknown function
DUF298 (InterPro:IPR005176), UBA-like (InterPro:IPR009060);
BEST Arabidopsis thaliana protein match is: Domain of
unknown function (DUF298) (TAIR:AT1G15860.2); Has 857 Blast
hits to 855 proteins in 202 species: Archae - 0; Bacteria -
0; Metazoa - 482; Fungi - 154; Plants - 139; Viruses - 0;
Other Eukaryotes - 82 (source: NCBI BLink).		 -0.81 0.31 -0.31
49 AT3G17640 Leucine-rich repeat (LRR) family protein 0.81 0.31 -0.31
50 AT3G26932 dsRNA-binding protein 3 dsRNA-binding protein 3 0.81 0.31 -0.32
51 AT4G25960 P-glycoprotein 2 ATP-binding cassette B2,
P-glycoprotein 2		 0.81 0.33 -0.32
52 AT3G61930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; EXPRESSED
IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C
globular stage, petal differentiation and expansion stage;
Has 11 Blast hits to 11 proteins in 5 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 11; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.81 0.33 -0.31
53 AT3G16290 AAA-type ATPase family protein embryo defective 2083 0.81 0.3 -0.31
54 AT1G51080 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED
DURING: 11 growth stages; Has 101 Blast hits to 98 proteins
in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38;
Fungi - 10; Plants - 27; Viruses - 0; Other Eukaryotes - 26
(source: NCBI BLink).		 0.81 0.33 -0.33
55 AT1G74850 plastid transcriptionally active 2 PIGMENT DEFECTIVE 343, plastid
transcriptionally active 2		 0.81 0.31 -0.33
56 AT2G42840 protodermal factor 1 protodermal factor 1 0.8 0.31 -0.32
57 AT2G26330 Leucine-rich receptor-like protein kinase family protein ERECTA, QUANTITATIVE RESISTANCE TO
PLECTOSPHAERELLA 1		 0.8 0.31 -0.31
58 AT5G55730 FASCICLIN-like arabinogalactan 1 FASCICLIN-like arabinogalactan 1 0.8 0.32 -0.3
59 AT3G61550 RING/U-box superfamily protein 0.8 0.31 -0.29
60 AT2G04270 RNAse E/G-like RNAse E/G-like 0.8 0.3 -0.3
61 AT4G34610 BEL1-like homeodomain 6 BEL1-like homeodomain 6 0.8 0.3 -0.33
62 AT1G10140 Uncharacterised conserved protein UCP031279 -0.8 0.3 -0.32
63 AT5G10820 Major facilitator superfamily protein -0.79 0.32 -0.31
64 AT3G53480 pleiotropic drug resistance 9 ATP-binding cassette G37,
PLEIOTROPIC DRUG RESISTANCE 9,
pleiotropic drug resistance 9,
polar auxin transport inhibitor
sensitive 1		 -0.79 0.32 -0.31
65 AT4G19880 Glutathione S-transferase family protein -0.78 0.29 -0.33
66 AT5G51040 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF339 (InterPro:IPR005631); Has 532 Blast
hits to 532 proteins in 207 species: Archae - 0; Bacteria -
285; Metazoa - 16; Fungi - 41; Plants - 40; Viruses - 0;
Other Eukaryotes - 150 (source: NCBI BLink).		 -0.78 0.32 -0.33
67 AT1G32170 xyloglucan endotransglucosylase/hydrolase 30 xyloglucan
endotransglucosylase/hydrolase 30,
xyloglucan endotransglycosylase 4		 -0.78 0.32 -0.33
68 AT3G25610 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 -0.78 0.33 -0.32
69 AT2G29500 HSP20-like chaperones superfamily protein -0.77 0.32 -0.3
70 AT3G62920 unknown protein; Has 25 Blast hits to 25 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.77 0.29 -0.33
71 AT4G22530 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.77 0.29 -0.32
72 AT1G22800 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.76 0.32 -0.31
73 AT3G59700 lectin-receptor kinase lectin-receptor kinase,
lectin-receptor kinase,
LECTIN-RECEPTOR KINASE 1		 -0.76 0.33 -0.31
74 AT2G27450 nitrilase-like protein 1 ATNLP1, CPA, nitrilase-like
protein 1		 -0.76 0.34 -0.32
75 AT1G04850 ubiquitin-associated (UBA)/TS-N domain-containing protein -0.76 0.33 -0.34
76 AT1G08315 ARM repeat superfamily protein -0.76 0.3 -0.31
77 AT2G29490 glutathione S-transferase TAU 1 glutathione S-transferase TAU 1,
GLUTATHIONE S-TRANSFERASE 19,
glutathione S-transferase TAU 1		 -0.76 0.32 -0.32
78 AT4G39950 cytochrome P450, family 79, subfamily B, polypeptide 2 cytochrome P450, family 79,
subfamily B, polypeptide 2		 -0.76 0.31 -0.32
79 AT2G15490 UDP-glycosyltransferase 73B4 UDP-glycosyltransferase 73B4 -0.76 0.32 -0.33
80 AT2G43060 ILI1 binding bHLH 1 ILI1 binding bHLH 1 -0.75 0.33 -0.32
81 AT1G34370 C2H2 and C2HC zinc fingers superfamily protein sensitive to proton rhizotoxicity
1		 -0.75 0.33 -0.31
82 AT5G58375 Methyltransferase-related protein -0.75 0.31 -0.3
83 AT1G51420 sucrose-phosphatase 1 SUCROSE-PHOSPHATASE 1,
sucrose-phosphatase 1		 -0.74 0.3 -0.32
84 AT5G45410 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G25030.2); Has 124 Blast hits
to 124 proteins in 34 species: Archae - 2; Bacteria - 31;
Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.74 0.32 -0.33
85 AT1G06180 myb domain protein 13 myb domain protein 13, ATMYBLFGN,
myb domain protein 13		 -0.74 0.32 -0.33
86 AT1G35260 MLP-like protein 165 MLP-like protein 165 -0.74 0.32 -0.32
87 AT2G17290 Calcium-dependent protein kinase family protein ARABIDOPSIS THALIANA
CALMODULIN-DOMAIN PROTEIN KINASE
3, ARABIDOPSIS THALIANA
CALCIUM-DEPENDENT PROTEIN KINASE
6, calcium dependent protein
kinase 6		 -0.73 0.33 -0.32
88 AT1G16670 Protein kinase superfamily protein -0.73 0.3 -0.32
89 AT4G39955 alpha/beta-Hydrolases superfamily protein -0.73 0.31 -0.3
90 AT1G09740 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.73 0.32 -0.31
91 AT3G45130 lanosterol synthase 1 lanosterol synthase 1 -0.72 0.31 -0.32
92 AT2G28120 Major facilitator superfamily protein -0.72 0.31 -0.29
93 AT2G19570 cytidine deaminase 1 AT-CDA1, cytidine deaminase 1,
DESZ		 -0.72 0.34 -0.32
94 AT4G33780 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; BEST Arabidopsis thaliana protein match is:
short hypocotyl in white light1 (TAIR:AT1G69935.1); Has 40
Blast hits to 40 proteins in 10 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.72 0.31 -0.33
95 AT2G33630 NAD(P)-binding Rossmann-fold superfamily protein -0.72 0.32 -0.32
96 AT1G69410 eukaryotic elongation factor 5A-3 EUKARYOTIC ELONGATION FACTOR 5A-3,
eukaryotic elongation factor 5A-3		 -0.72 0.32 -0.31
97 AT1G79690 nudix hydrolase homolog 3 nudix hydrolase homolog 3, nudix
hydrolase homolog 3		 -0.72 0.32 -0.29
98 AT1G09560 germin-like protein 5 germin-like protein 5 -0.71 0.29 -0.32
99 AT4G21610 lsd one like 2 lsd one like 2 -0.71 0.32 -0.3
100 AT5G12210 RAB geranylgeranyl transferase beta subunit 1 RAB geranylgeranyl transferase
beta subunit 1, RAB geranylgeranyl
transferase beta subunit 1		 -0.71 0.3 -0.31
101 AT1G80360 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 -0.71 0.31 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
102 C0007 β-Sitosterol - Sitosterol plant sterol biosynthesis 0.8 0.44 -0.44 C0007