AT4G02530 : -
Query Information
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AGICode AT4G02530
Description chloroplast thylakoid lumen protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G02530 chloroplast thylakoid lumen protein 1 0.33 -0.31
2 AT5G08410 ferredoxin/thioredoxin reductase subunit A (variable
subunit) 2		 ferredoxin/thioredoxin reductase
subunit A (variable subunit) 2		 0.85 0.33 -0.32
3 AT2G27680 NAD(P)-linked oxidoreductase superfamily protein 0.85 0.31 -0.32
4 AT1G77090 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP
family protein		 0.84 0.33 -0.32
5 AT5G06060 NAD(P)-binding Rossmann-fold superfamily protein 0.84 0.31 -0.31
6 AT4G35250 NAD(P)-binding Rossmann-fold superfamily protein 0.84 0.32 -0.32
7 AT2G32480 ARABIDOPSIS SERIN PROTEASE ARABIDOPSIS SERIN PROTEASE 0.83 0.34 -0.29
8 AT2G45770 signal recognition particle receptor protein, chloroplast
(FTSY)		 CPFTSY, FERRIC CHELATE REDUCTASE
DEFECTIVE 4		 0.83 0.32 -0.33
9 AT1G52220 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast
thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: photosystem I P
subunit (TAIR:AT2G46820.2); Has 291 Blast hits to 291
proteins in 50 species: Archae - 0; Bacteria - 90; Metazoa
- 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes
- 1 (source: NCBI BLink).		 0.82 0.35 -0.3
10 AT4G28030 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.81 0.3 -0.33
11 AT4G02790 GTP-binding family protein EMBRYO DEFECTIVE 3129 0.81 0.31 -0.3
12 AT4G29690 Alkaline-phosphatase-like family protein -0.81 0.33 -0.32
13 AT4G27700 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.81 0.31 -0.3
14 AT4G05090 Inositol monophosphatase family protein 0.81 0.32 -0.34
15 AT5G28750 Bacterial sec-independent translocation protein mttA/Hcf106 0.8 0.32 -0.33
16 AT3G17930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF3007
(InterPro:IPR021562); Has 236 Blast hits to 236 proteins in
83 species: Archae - 0; Bacteria - 117; Metazoa - 0; Fungi
- 0; Plants - 39; Viruses - 0; Other Eukaryotes - 80
(source: NCBI BLink).		 0.79 0.33 -0.31
17 AT3G25530 glyoxylate reductase 1 ATGHBDH, GHBDH, glyoxylate
reductase 1, GLYOXYLATE REDUCTASE
1		 0.78 0.34 -0.31
18 AT2G01110 Sec-independent periplasmic protein translocase ALBINO AND PALE GREEN 2, PGA2,
TWIN-ARGININE TRANSLOCATION C,
unfertilized embryo sac 3		 0.78 0.3 -0.31
19 AT1G31160 HISTIDINE TRIAD NUCLEOTIDE-BINDING 2 HISTIDINE TRIAD NUCLEOTIDE-BINDING
2		 0.78 0.32 -0.31
20 AT5G38660 acclimation of photosynthesis to environment ACCLIMATION OF PHOTOSYNTHESIS TO
ENVIRONMENT		 0.77 0.3 -0.31
21 AT1G56190 Phosphoglycerate kinase family protein 0.77 0.31 -0.29
22 AT1G66130 NAD(P)-binding Rossmann-fold superfamily protein 0.77 0.31 -0.32
23 AT5G16710 dehydroascorbate reductase 1 dehydroascorbate reductase 1 0.76 0.3 -0.3
24 AT4G04850 K+ efflux antiporter 3 ATKEA3, K+ efflux antiporter 3 0.76 0.31 -0.31
25 AT5G57345 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.76 0.32 -0.29
26 AT3G16460 Mannose-binding lectin superfamily protein jacalin-related lectin 34 -0.75 0.33 -0.3
27 AT1G14240 GDA1/CD39 nucleoside phosphatase family protein -0.73 0.31 -0.32
28 AT5G35940 Mannose-binding lectin superfamily protein -0.73 0.33 -0.3
29 AT5G63930 Leucine-rich repeat protein kinase family protein -0.73 0.3 -0.3
30 AT5G19520 mechanosensitive channel of small conductance-like 9 ATMSL9, mechanosensitive channel
of small conductance-like 9		 -0.72 0.31 -0.31
31 AT4G12080 AT-hook motif nuclear-localized protein 1 AT-hook motif nuclear-localized
protein 1, ATAHL1		 -0.72 0.29 -0.32
32 AT1G22440 Zinc-binding alcohol dehydrogenase family protein -0.71 0.32 -0.31
33 AT2G39110 Protein kinase superfamily protein -0.7 0.32 -0.32
34 AT2G43535 Scorpion toxin-like knottin superfamily protein -0.7 0.31 -0.31
35 AT1G56145 Leucine-rich repeat transmembrane protein kinase -0.68 0.32 -0.33
36 AT1G15210 pleiotropic drug resistance 7 ATP-binding cassette G35,
PLEIOTROPIC DRUG RESISTANCE 7,
pleiotropic drug resistance 7		 -0.67 0.31 -0.3
37 AT3G20960 cytochrome P450, family 705, subfamily A, polypeptide 33 cytochrome P450, family 705,
subfamily A, polypeptide 33		 -0.67 0.32 -0.31
38 AT1G33750 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.66 0.32 -0.32
39 AT4G01480 pyrophosphorylase 5 pyrophosphorylase 5,
pyrophosphorylase 5		 -0.66 0.3 -0.31
40 AT2G23050 Phototropic-responsive NPH3 family protein MAB4/ENP/NPY1-LIKE 4, NAKED PINS
IN YUC MUTANTS 4		 -0.65 0.32 -0.31
41 AT5G48010 thalianol synthase 1 Arabidopsis thaliana thalianol
synthase 1, THALIANOL SYNTHASE,
thalianol synthase 1		 -0.65 0.32 -0.33
42 AT2G02160 CCCH-type zinc finger family protein -0.65 0.29 -0.34
43 AT2G39300 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: vacuole; EXPRESSED IN: 8 plant structures;
EXPRESSED DURING: 4 anthesis, petal differentiation and
expansion stage; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G55060.1); Has 46416 Blast
hits to 28308 proteins in 1743 species: Archae - 734;
Bacteria - 4822; Metazoa - 24446; Fungi - 3539; Plants -
2267; Viruses - 163; Other Eukaryotes - 10445 (source: NCBI
BLink).		 -0.65 0.33 -0.32
44 AT1G53180 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 13 plant
structures; EXPRESSED DURING: 6 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G15115.1); Has 58 Blast hits to 56 proteins in 22
species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 4;
Plants - 29; Viruses - 0; Other Eukaryotes - 19 (source:
NCBI BLink).		 -0.65 0.3 -0.32
45 AT2G30840 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.64 0.33 -0.3
46 AT4G17800 Predicted AT-hook DNA-binding family protein -0.64 0.31 -0.33
47 AT1G18980 RmlC-like cupins superfamily protein -0.64 0.33 -0.31
48 AT5G42580 cytochrome P450, family 705, subfamily A, polypeptide 12 cytochrome P450, family 705,
subfamily A, polypeptide 12		 -0.64 0.3 -0.32
49 AT1G21370 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF218 (InterPro:IPR003848); Has 160 Blast
hits to 160 proteins in 86 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 102; Plants - 44; Viruses - 0;
Other Eukaryotes - 14 (source: NCBI BLink).		 -0.63 0.31 -0.32
50 AT4G37250 Leucine-rich repeat protein kinase family protein -0.63 0.32 -0.3
51 AT2G19110 heavy metal atpase 4 ARABIDOPSIS HEAVY METAL ATPASE 4,
heavy metal atpase 4		 -0.63 0.32 -0.32
52 AT5G23840 MD-2-related lipid recognition domain-containing protein -0.63 0.31 -0.31
53 AT1G56345 Pseudouridine synthase family protein -0.62 0.32 -0.31
54 AT3G21420 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 LATERAL BRANCHING OXIDOREDUCTASE 1 -0.62 0.3 -0.31
55 AT5G01160 RING/U-box superfamily protein -0.61 0.34 -0.32
56 AT4G00080 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 unfertilized embryo sac 11 -0.61 0.31 -0.3
57 AT1G01190 cytochrome P450, family 78, subfamily A, polypeptide 8 cytochrome P450, family 78,
subfamily A, polypeptide 8		 -0.61 0.3 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
58 C0241 Stigmasterol 3-O-β-D-glucoside - Stigmasterol 3-O-β-D-glucoside - -0.88 0.51 -0.49 C0241
59 C0051 Aconitic acid cis-Aconitic acid cis-Aconitate glutamine biosynthesis III,
TCA cycle variation V (plant),
glyoxylate cycle,
TCA cycle variation III (eukaryotic) 		-0.83 0.43 -0.45 C0051
60 C0025 2-Hydroxy-3-butenylglucosinolate (R),(S)-2-Hydroxy-3-butenylglucosinolate 2-hydroxy-3-butenylglucosinolate glucosinolate biosynthesis from dihomomethionine -0.62 0.44 -0.46 C0025