AT4G02220 : -
Query Information
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AGICode AT4G02220
Description zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G02220 zinc finger (MYND type) family protein / programmed cell
death 2 C-terminal domain-containing protein		 1 0.32 -0.29
2 AT3G13230 RNA-binding KH domain-containing protein 0.9 0.31 -0.3
3 AT2G34260 transducin family protein / WD-40 repeat family protein human WDR55 (WD40 repeat) homolog 0.88 0.31 -0.29
4 AT4G12600 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.87 0.36 -0.3
5 AT1G80750 Ribosomal protein L30/L7 family protein 0.86 0.32 -0.32
6 AT5G57990 ubiquitin-specific protease 23 ubiquitin-specific protease 23 0.86 0.32 -0.32
7 AT4G01560 Ribosomal RNA processing Brix domain protein maternal effect embryo arrest 49 0.86 0.3 -0.32
8 AT5G57280 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 root initiation defective 2 0.86 0.31 -0.31
9 AT4G15770 RNA binding 0.86 0.33 -0.31
10 AT4G28450 nucleotide binding;protein binding 0.86 0.28 -0.33
11 AT2G34570 PIN domain-like family protein maternal effect embryo arrest 21 0.85 0.31 -0.32
12 AT2G37990 ribosome biogenesis regulatory protein (RRS1) family
protein		 0.85 0.33 -0.29
13 AT1G48920 nucleolin like 1 nucleolin like 1, nucleolin like
1, PARALLEL 1		 0.85 0.32 -0.31
14 AT3G23620 Ribosomal RNA processing Brix domain protein 0.85 0.33 -0.32
15 AT2G25670 BEST Arabidopsis thaliana protein match is: copper ion
binding (TAIR:AT4G32610.1); Has 43784 Blast hits to 26928
proteins in 1799 species: Archae - 86; Bacteria - 6347;
Metazoa - 15971; Fungi - 5398; Plants - 1931; Viruses -
259; Other Eukaryotes - 13792 (source: NCBI BLink).		 0.85 0.31 -0.3
16 AT3G52040 unknown protein; Has 37 Blast hits to 37 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.85 0.31 -0.33
17 AT1G72440 CCAAT-binding factor embryo sac development arrest 25,
SLOW WALKER2		 0.85 0.32 -0.34
18 AT2G19480 nucleosome assembly protein 1;2 nucleosome assembly protein 1;2,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A 02,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A 2		 0.85 0.31 -0.31
19 AT1G42440 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
ribosome biogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: AARP2CN (InterPro:IPR012948),
Protein of unknown function DUF663 (InterPro:IPR007034);
BEST Arabidopsis thaliana protein match is: P-loop
containing nucleoside triphosphate hydrolases superfamily
protein (TAIR:AT1G06720.1); Has 2741 Blast hits to 2088
proteins in 291 species: Archae - 2; Bacteria - 131;
Metazoa - 833; Fungi - 650; Plants - 171; Viruses - 49;
Other Eukaryotes - 905 (source: NCBI BLink).		 0.85 0.32 -0.33
20 AT5G02470 Transcription factor DP DPA 0.84 0.33 -0.3
21 AT3G56070 rotamase cyclophilin 2 rotamase cyclophilin 2 0.84 0.32 -0.35
22 AT5G61770 PETER PAN-like protein PETER PAN-like protein 0.84 0.34 -0.32
23 AT5G44320 Eukaryotic translation initiation factor 3 subunit 7
(eIF-3)		 0.84 0.33 -0.32
24 AT1G75670 DNA-directed RNA polymerases 0.84 0.31 -0.31
25 AT4G12470 azelaic acid induced 1 azelaic acid induced 1 0.84 0.32 -0.32
26 AT2G32220 Ribosomal L27e protein family 0.84 0.31 -0.3
27 AT5G52470 fibrillarin 1 ATFBR1, ATFIB1, FIBRILLARIN 1,
fibrillarin 1,
SKP1/ASK1-INTERACTING PROTEIN		 0.84 0.31 -0.32
28 AT1G31660 CONTAINS InterPro DOMAIN/s: Bystin (InterPro:IPR007955);
Has 475 Blast hits to 467 proteins in 210 species: Archae -
0; Bacteria - 9; Metazoa - 155; Fungi - 139; Plants - 55;
Viruses - 0; Other Eukaryotes - 117 (source: NCBI BLink).		 0.84 0.32 -0.32
29 AT3G25940 TFIIB zinc-binding protein 0.83 0.32 -0.36
30 AT3G11710 lysyl-tRNA synthetase 1 lysyl-tRNA synthetase 1 0.83 0.33 -0.33
31 AT5G14050 Transducin/WD40 repeat-like superfamily protein 0.83 0.31 -0.34
32 AT2G36690 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.83 0.32 -0.31
33 AT2G44860 Ribosomal protein L24e family protein 0.83 0.33 -0.31
34 AT1G15420 CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp12
(InterPro:IPR007148); Has 764 Blast hits to 656 proteins in
193 species: Archae - 0; Bacteria - 42; Metazoa - 237;
Fungi - 154; Plants - 85; Viruses - 23; Other Eukaryotes -
223 (source: NCBI BLink).		 0.83 0.29 -0.33
35 AT4G10620 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.83 0.33 -0.33
36 AT1G18850 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 40 Blast hits to 40 proteins
in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.83 0.3 -0.34
37 AT4G12480 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 EARLY ARABIDOPSIS ALUMINUM INDUCED
1, pEARLI 1		 0.82 0.31 -0.3
38 AT3G44750 histone deacetylase 3 ATHD2A, HISTONE DEACETYLASE 2A,
histone deacetylase 3, HDT1		 0.82 0.32 -0.31
39 AT1G75200 flavodoxin family protein / radical SAM domain-containing
protein		 0.82 0.32 -0.33
40 AT5G11240 transducin family protein / WD-40 repeat family protein 0.82 0.33 -0.3
41 AT3G22660 rRNA processing protein-related 0.82 0.34 -0.29
42 AT2G19540 Transducin family protein / WD-40 repeat family protein 0.82 0.3 -0.31
43 AT1G29900 carbamoyl phosphate synthetase B carbamoyl phosphate synthetase B,
VENOSA 3		 0.81 0.31 -0.34
44 AT5G23050 acyl-activating enzyme 17 acyl-activating enzyme 17 -0.81 0.34 -0.31
45 AT5G41010 DNA directed RNA polymerase, 7 kDa subunit NRPB12, NRPD12, NRPE12 0.81 0.31 -0.33
46 AT3G10530 Transducin/WD40 repeat-like superfamily protein 0.81 0.33 -0.32
47 AT5G57870 MIF4G domain-containing protein / MA3 domain-containing
protein		 eukaryotic translation Initiation
Factor isoform 4G1		 0.81 0.33 -0.31
48 AT5G61020 evolutionarily conserved C-terminal region 3 evolutionarily conserved
C-terminal region 3		 0.81 0.31 -0.33
49 AT4G26780 Co-chaperone GrpE family protein AR192, mitochondrial GrpE 2 0.81 0.3 -0.31
50 AT2G18900 Transducin/WD40 repeat-like superfamily protein 0.81 0.3 -0.31
51 AT1G55900 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 embryo defective 1860, TIM50 0.81 0.33 -0.3
52 AT5G55920 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 OLIGOCELLULA 2 0.81 0.31 -0.31
53 AT1G10840 translation initiation factor 3 subunit H1 translation initiation factor 3
subunit H1		 0.8 0.35 -0.34
54 AT3G57490 Ribosomal protein S5 family protein 0.8 0.33 -0.31
55 AT2G04690 Pyridoxamine 5'-phosphate oxidase family protein -0.8 0.32 -0.3
56 AT3G03920 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein 0.8 0.31 -0.31
57 AT3G13940 DNA binding;DNA-directed RNA polymerases 0.8 0.31 -0.3
58 AT5G22840 Protein kinase superfamily protein 0.8 0.31 -0.31
59 AT5G06110 DnaJ domain ;Myb-like DNA-binding domain 0.8 0.31 -0.32
60 AT5G19320 RAN GTPase activating protein 2 RAN GTPase activating protein 2 0.79 0.3 -0.32
61 AT3G18600 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.79 0.31 -0.31
62 AT3G02190 Ribosomal protein L39 family protein 0.79 0.31 -0.34
63 AT1G74560 NAP1-related protein 1 NAP1-related protein 1 0.79 0.31 -0.32
64 AT2G19385 zinc ion binding 0.79 0.32 -0.32
65 AT1G60770 Tetratricopeptide repeat (TPR)-like superfamily protein 0.79 0.29 -0.3
66 AT3G62940 Cysteine proteinases superfamily protein 0.79 0.3 -0.31
67 AT2G44510 CDK inhibitor P21 binding protein 0.79 0.31 -0.32
68 AT1G04900 Protein of unknown function (DUF185) 0.78 0.31 -0.3
69 AT5G59980 Polymerase/histidinol phosphatase-like 0.78 0.29 -0.32
70 AT2G17670 Tetratricopeptide repeat (TPR)-like superfamily protein 0.78 0.31 -0.32
71 AT2G36070 translocase inner membrane subunit 44-2 translocase inner membrane subunit
44-2, translocase inner membrane
subunit 44-2		 0.78 0.29 -0.31
72 AT2G25970 KH domain-containing protein 0.78 0.3 -0.31
73 AT3G22320 Eukaryotic rpb5 RNA polymerase subunit family protein ATRPABC24.3, NRPB5, NRPD5, RNA
POLYMERASE II FIFTH LARGEST
SUBUNIT, A		 0.78 0.35 -0.33
74 AT2G25355 PNAS-3 related 0.78 0.31 -0.31
75 AT3G55605 Mitochondrial glycoprotein family protein 0.78 0.3 -0.31
76 AT3G56150 eukaryotic translation initiation factor 3C ATEIF3C-1, ATTIF3C1, eukaryotic
translation initiation factor 3C,
EIF3C-1, TIF3C1		 0.78 0.3 -0.31
77 AT3G25120 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 0.77 0.33 -0.34
78 AT1G66070 Translation initiation factor eIF3 subunit 0.77 0.32 -0.29
79 AT1G26670 Vesicle transport v-SNARE family protein ATVTI12, VESICAL TRANSPORT V-SNARE
12, VTI1B		 -0.77 0.33 -0.33
80 AT5G02500 heat shock cognate protein 70-1 ARABIDOPSIS THALIANA HEAT SHOCK
COGNATE PROTEIN 70-1, AtHsp70-1,
HEAT SHOCK COGNATE PROTEIN 70,
heat shock cognate protein 70-1,
HEAT SHOCK PROTEIN 70-1		 0.77 0.31 -0.33
81 AT3G02220 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2039 (InterPro:IPR019351); Has 215
Blast hits to 215 proteins in 94 species: Archae - 2;
Bacteria - 2; Metazoa - 125; Fungi - 4; Plants - 38;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 0.77 0.34 -0.32
82 AT3G13860 heat shock protein 60-3A heat shock protein 60-3A 0.77 0.31 -0.32
83 AT1G06380 Ribosomal protein L1p/L10e family 0.77 0.34 -0.32
84 AT4G37090 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.77 0.33 -0.31
85 AT1G04870 protein arginine methyltransferase 10 ATPRMT10, protein arginine
methyltransferase 10		 0.77 0.3 -0.32
86 AT1G22730 MA3 domain-containing protein 0.77 0.35 -0.31
87 AT5G19820 ARM repeat superfamily protein embryo defective 2734 0.77 0.32 -0.32
88 AT1G79490 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 2217 0.77 0.3 -0.31
89 AT3G46560 Tim10/DDP family zinc finger protein embryo defective 2474, TIM9 0.77 0.33 -0.35
90 AT3G52070 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 23 Blast hits to 23 proteins
in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.77 0.31 -0.31
91 AT4G24940 SUMO-activating enzyme 1A AT-SAE1-1, SUMO-ACTIVATING ENZYME
1A, SUMO-activating enzyme 1A		 0.77 0.32 -0.32
92 AT1G50920 Nucleolar GTP-binding protein 0.77 0.31 -0.31
93 AT4G22380 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.77 0.33 -0.31
94 AT1G64370 unknown protein; Has 773 Blast hits to 375 proteins in 118
species: Archae - 0; Bacteria - 97; Metazoa - 421; Fungi -
108; Plants - 31; Viruses - 0; Other Eukaryotes - 116
(source: NCBI BLink).		 -0.77 0.31 -0.32
95 AT1G11320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plastid; EXPRESSED IN: 7 plant structures;
EXPRESSED DURING: C globular stage, F mature embryo stage,
petal differentiation and expansion stage, E expanded
cotyledon stage, D bilateral stage; Has 46 Blast hits to 46
proteins in 14 species: Archae - 0; Bacteria - 2; Metazoa -
0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.77 0.31 -0.35
96 AT1G24530 Transducin/WD40 repeat-like superfamily protein 0.77 0.31 -0.31
97 AT3G04580 Signal transduction histidine kinase, hybrid-type, ethylene
sensor		 ETHYLENE INSENSITIVE 4 0.77 0.31 -0.32
98 AT2G31240 Tetratricopeptide repeat (TPR)-like superfamily protein 0.77 0.31 -0.3
99 AT5G18640 alpha/beta-Hydrolases superfamily protein -0.76 0.3 -0.33
100 AT5G16800 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.76 0.33 -0.32
101 AT2G40420 Transmembrane amino acid transporter family protein -0.75 0.29 -0.33
102 AT4G19160 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.75 0.32 -0.31
103 AT1G01240 unknown protein; INVOLVED IN: N-terminal protein
myristoylation; EXPRESSED IN: 17 plant structures;
EXPRESSED DURING: 11 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G46550.1); Has 95 Blast hits to 78 proteins in 16
species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 0;
Plants - 80; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.75 0.33 -0.33
104 AT3G19620 Glycosyl hydrolase family protein -0.74 0.32 -0.32
105 AT1G30500 nuclear factor Y, subunit A7 nuclear factor Y, subunit A7 -0.74 0.33 -0.31
106 AT5G18630 alpha/beta-Hydrolases superfamily protein -0.74 0.31 -0.35
107 AT3G53950 glyoxal oxidase-related protein -0.73 0.3 -0.33
108 AT3G14067 Subtilase family protein -0.73 0.31 -0.32
109 AT1G71480 Nuclear transport factor 2 (NTF2) family protein -0.73 0.32 -0.3
110 AT3G06780 glycine-rich protein -0.72 0.31 -0.31
111 AT3G52060 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.72 0.31 -0.32
112 AT1G44770 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G49710.3); Has 81 Blast hits
to 81 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.71 0.34 -0.3
113 AT5G49710 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G24590.1); Has 35333 Blast
hits to 34131 proteins in 2444 species: Archae - 798;
Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531;
Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).		 -0.7 0.29 -0.31
114 AT2G39450 Cation efflux family protein ATMTP11, MTP11 -0.7 0.31 -0.31
115 AT3G10940 dual specificity protein phosphatase (DsPTP1) family
protein		 LIKE SEX4 2 -0.69 0.31 -0.28
116 AT5G63200 tetratricopeptide repeat (TPR)-containing protein -0.69 0.32 -0.31
117 AT5G62000 auxin response factor 2 ARF1-BINDING PROTEIN, auxin
response factor 2, HLS1
SUPPRESSOR, ORESARA 14		 -0.69 0.3 -0.32
118 AT5G57350 H(+)-ATPase 3 H(+)-ATPase 3, ARABIDOPSIS
THALIANA ARABIDOPSIS H(+)-ATPASE,
H(+)-ATPase 3		 -0.69 0.33 -0.3
119 AT1G79380 Ca(2)-dependent phospholipid-binding protein (Copine)
family		 -0.68 0.3 -0.33
120 AT3G10420 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 SEEDLING PLASTID DEVELOPMENT 1 -0.68 0.32 -0.32
121 AT5G01770 HEAT repeat ;WD domain, G-beta repeat protein protein ATRAPTOR1A, RAPTOR1A, RAPTOR2 -0.68 0.33 -0.32
122 AT1G68540 NAD(P)-binding Rossmann-fold superfamily protein cinnamoyl coA reductase-like 6,
tetraketide alpha-pyrone reductase
2		 -0.68 0.32 -0.31
123 AT5G57040 Lactoylglutathione lyase / glyoxalase I family protein -0.68 0.32 -0.31
124 AT4G33960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 20 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G15830.1); Has 32 Blast hits to 32 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.67 0.33 -0.3
125 AT2G24420 DNA repair ATPase-related -0.67 0.31 -0.33
126 AT3G54290 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
N-terminal protein myristoylation; LOCATED IN: chloroplast;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Haemerythrin/HHE
cation-binding motif (InterPro:IPR012312); Has 59 Blast
hits to 59 proteins in 14 species: Archae - 0; Bacteria -
2; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 -0.67 0.34 -0.32
127 AT5G43600 ureidoglycolate amidohydrolase ARABIDOPSIS THALIANA ALLANTOATE
AMIDOHYDROLASE 2, ureidoglycolate
amidohydrolase		 -0.67 0.31 -0.3
128 AT3G02340 RING/U-box superfamily protein -0.66 0.33 -0.32
129 AT3G16280 Integrase-type DNA-binding superfamily protein -0.65 0.33 -0.31
130 AT4G14500 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.64 0.3 -0.32
131 AT5G62130 Per1-like family protein -0.63 0.31 -0.31
132 AT2G20770 GCR2-like 2 GCR2-like 2 -0.63 0.32 -0.32
133 AT2G37900 Major facilitator superfamily protein -0.63 0.31 -0.31
134 AT1G54680 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G27290.1); Has 200 Blast hits to 200 proteins in
57 species: Archae - 0; Bacteria - 59; Metazoa - 0; Fungi -
0; Plants - 127; Viruses - 0; Other Eukaryotes - 14
(source: NCBI BLink).		 -0.62 0.31 -0.33
135 AT5G16150 plastidic GLC translocator GLUCOSE TRANSPORTER 1, plastidic
GLC translocator		 -0.62 0.31 -0.33
136 AT5G52880 F-box family protein -0.62 0.31 -0.31
137 AT5G14510 ARM repeat superfamily protein -0.62 0.31 -0.35
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
138 C0111 Hexa-2-O-glycerol-β-galactopyranoside Hexa-2-O-gllycerol-β-D-galactopyranoside - - -0.78 0.44 -0.46