AT1G20300 : -
Query Information
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AGICode AT1G20300
Description Pentatricopeptide repeat (PPR) superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G20300 Pentatricopeptide repeat (PPR) superfamily protein 1 0.3 -0.33
2 AT5G02820 Spo11/DNA topoisomerase VI, subunit A protein BRASSINOSTEROID INSENSITIVE 5,
ROOT HAIRLESS 2		 0.8 0.31 -0.32
3 AT1G69250 Nuclear transport factor 2 (NTF2) family protein with RNA
binding (RRM-RBD-RNP motifs) domain		 0.8 0.31 -0.32
4 AT2G03820 nonsense-mediated mRNA decay NMD3 family protein 0.79 0.33 -0.3
5 AT5G46920 Intron maturase, type II family protein 0.78 0.32 -0.31
6 AT1G61640 Protein kinase superfamily protein 0.78 0.32 -0.29
7 AT4G37190 LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 20
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Beta tubulin, autoregulation
binding site (InterPro:IPR013838), Misato Segment II,
myosin-like (InterPro:IPR019605), Tubulin/FtsZ, N-terminal
(InterPro:IPR019746); Has 345 Blast hits to 341 proteins in
161 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi
- 140; Plants - 55; Viruses - 0; Other Eukaryotes - 19
(source: NCBI BLink).		 0.76 0.29 -0.3
8 AT1G04350 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.76 0.29 -0.3
9 AT1G28060 Pre-mRNA-splicing factor 3 0.75 0.31 -0.29
10 AT4G21170 Tetratricopeptide repeat (TPR)-like superfamily protein 0.74 0.31 -0.32
11 AT2G18520 Tetratricopeptide repeat (TPR)-like superfamily protein 0.74 0.32 -0.33
12 AT5G52820 WD-40 repeat family protein / notchless protein, putative 0.74 0.32 -0.31
13 AT2G44020 Mitochondrial transcription termination factor family
protein		 0.73 0.3 -0.32
14 AT3G16700 Fumarylacetoacetate (FAA) hydrolase family -0.73 0.32 -0.32
15 AT3G16910 acyl-activating enzyme 7 acyl-activating enzyme 7, ACETATE
NON-UTILIZING 1		 -0.72 0.33 -0.34
16 AT5G12220 las1-like family protein 0.72 0.31 -0.31
17 AT4G00090 Transducin/WD40 repeat-like superfamily protein 0.72 0.31 -0.32
18 AT2G24500 Zinc finger protein 622 FZF 0.72 0.32 -0.33
19 AT1G04860 ubiquitin-specific protease 2 ATUBP2, ubiquitin-specific
protease 2		 0.72 0.31 -0.34
20 AT5G19350 RNA-binding (RRM/RBD/RNP motifs) family protein 0.72 0.32 -0.3
21 AT5G16930 AAA-type ATPase family protein 0.72 0.32 -0.31
22 AT3G09600 Homeodomain-like superfamily protein LHY-CCA1-LIKE5, REVEILLE 8 -0.72 0.33 -0.3
23 AT4G01320 Peptidase family M48 family protein ATSTE24, STE24 0.71 0.32 -0.31
24 AT3G22670 Pentatricopeptide repeat (PPR) superfamily protein 0.71 0.31 -0.32
25 AT5G60960 Pentatricopeptide repeat (PPR) superfamily protein PPR protein localized to the
nucleus and mitochondria 1		 0.71 0.3 -0.32
26 AT3G16230 Predicted eukaryotic LigT -0.71 0.32 -0.33
27 AT3G15000 cobalt ion binding 0.71 0.33 -0.32
28 AT2G39120 Ubiquitin carboxyl-terminal hydrolase family protein what's this factor 9 0.71 0.32 -0.33
29 AT4G38150 Pentatricopeptide repeat (PPR) superfamily protein 0.71 0.31 -0.33
30 AT3G48250 Pentatricopeptide repeat (PPR) superfamily protein Buthionine sulfoximine-insensitive
roots 6		 0.7 0.31 -0.32
31 AT5G25800 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.7 0.32 -0.31
32 AT4G22200 potassium transport 2/3 AKT2, potassium transport 2/3,
AKT3, potassium transport 2/3		 -0.7 0.3 -0.31
33 AT1G63800 ubiquitin-conjugating enzyme 5 ubiquitin-conjugating enzyme 5 -0.7 0.31 -0.31
34 AT5G11350 DNAse I-like superfamily protein -0.69 0.32 -0.32
35 AT1G17665 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 15 plant structures;
EXPRESSED DURING: 11 growth stages; Has 149 Blast hits to
146 proteins in 39 species: Archae - 0; Bacteria - 4;
Metazoa - 21; Fungi - 5; Plants - 30; Viruses - 0; Other
Eukaryotes - 89 (source: NCBI BLink).		 0.69 0.31 -0.31
36 AT5G37930 Protein with RING/U-box and TRAF-like domains -0.69 0.32 -0.32
37 AT5G27710 unknown protein; Has 49 Blast hits to 49 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 -0.68 0.3 -0.31
38 AT3G50670 U1 small nuclear ribonucleoprotein-70K U1 small nuclear
ribonucleoprotein-70K, U1SNRNP		 0.68 0.29 -0.33
39 AT3G58520 Ubiquitin carboxyl-terminal hydrolase family protein 0.68 0.32 -0.31
40 AT1G14650 SWAP (Suppressor-of-White-APricot)/surp domain-containing
protein / ubiquitin family protein		 0.68 0.3 -0.31
41 AT3G13460 evolutionarily conserved C-terminal region 2 evolutionarily conserved
C-terminal region 2		 0.68 0.32 -0.3
42 AT4G04180 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.68 0.31 -0.3
43 AT1G71210 Pentatricopeptide repeat (PPR) superfamily protein 0.68 0.33 -0.3
44 AT2G45740 peroxin 11D peroxin 11D -0.68 0.34 -0.31
45 AT1G02370 Tetratricopeptide repeat (TPR)-like superfamily protein 0.68 0.31 -0.31
46 AT5G42950 GYF domain-containing protein 0.68 0.32 -0.31
47 AT5G61370 Pentatricopeptide repeat (PPR) superfamily protein 0.68 0.32 -0.34
48 AT1G33780 Protein of unknown function (DUF179) -0.68 0.33 -0.32
49 AT3G25210 Tetratricopeptide repeat (TPR)-like superfamily protein 0.67 0.33 -0.31
50 AT3G19000 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.67 0.3 -0.34
51 AT1G77930 Chaperone DnaJ-domain superfamily protein -0.67 0.32 -0.31
52 AT3G53570 FUS3-complementing gene 1 FUS3-complementing gene 1, AME2,
FUS3-complementing gene 1		 -0.67 0.31 -0.3
53 AT3G16310 mitotic phosphoprotein N' end (MPPN) family protein 0.67 0.31 -0.3
54 AT5G13270 Pentatricopeptide repeat (PPR) superfamily protein REQUIRED FOR ACCD RNA EDITING 1 0.67 0.34 -0.33
55 AT1G10360 glutathione S-transferase TAU 18 glutathione S-transferase TAU 18,
GLUTATHIONE S-TRANSFERASE 29,
glutathione S-transferase TAU 18		 -0.67 0.33 -0.31
56 AT1G25375 Metallo-hydrolase/oxidoreductase superfamily protein -0.67 0.33 -0.32
57 AT2G16920 ubiquitin-conjugating enzyme 23 PHO2 FAMILY UBIQUITIN CONJUGATION
ENZYME 2, ubiquitin-conjugating
enzyme 23		 0.67 0.33 -0.3
58 AT5G15750 Alpha-L RNA-binding motif/Ribosomal protein S4 family
protein		 0.67 0.31 -0.32
59 AT3G26782 Tetratricopeptide repeat (TPR)-like superfamily protein 0.66 0.3 -0.31
60 AT2G15630 Pentatricopeptide repeat (PPR) superfamily protein 0.66 0.31 -0.3
61 AT1G02960 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G02965.1); Has 83 Blast hits
to 82 proteins in 37 species: Archae - 0; Bacteria - 2;
Metazoa - 20; Fungi - 7; Plants - 29; Viruses - 0; Other
Eukaryotes - 25 (source: NCBI BLink).		 -0.66 0.33 -0.29
62 AT2G40650 PRP38 family protein 0.66 0.32 -0.3
63 AT3G59300 Pentatricopeptide repeat (PPR) superfamily protein -0.66 0.33 -0.34
64 AT1G16730 unknown protein 6 unknown protein 6 -0.66 0.3 -0.31
65 AT5G25500 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.66 0.31 -0.32
66 AT5G25630 Tetratricopeptide repeat (TPR)-like superfamily protein -0.66 0.31 -0.32
67 AT1G48430 Dihydroxyacetone kinase -0.66 0.34 -0.32
68 AT3G19800 Protein of unknown function (DUF177) -0.66 0.3 -0.33
69 AT3G24010 RING/FYVE/PHD zinc finger superfamily protein ARABIDOPSIS THALIANA INHIBITOR OF
GROWTH 1, INHIBITOR OF GROWTH 1		 -0.66 0.29 -0.31
70 AT4G10060 Beta-glucosidase, GBA2 type family protein -0.66 0.33 -0.3
71 AT2G35030 Pentatricopeptide repeat (PPR) superfamily protein 0.66 0.31 -0.32
72 AT1G68660 Ribosomal protein L12/ ATP-dependent Clp protease adaptor
protein ClpS family protein		 -0.66 0.32 -0.3
73 AT4G29220 phosphofructokinase 1 phosphofructokinase 1 -0.66 0.33 -0.32
74 AT5G49500 Signal recognition particle, SRP54 subunit protein -0.65 0.31 -0.32
75 AT4G18020 CheY-like two-component responsive regulator family protein APRR2, PSEUDO-RESPONSE REGULATOR 2 -0.65 0.31 -0.32
76 AT2G41120 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 10 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF309
(InterPro:IPR005500); Has 349 Blast hits to 349 proteins in
112 species: Archae - 2; Bacteria - 189; Metazoa - 0; Fungi
- 0; Plants - 31; Viruses - 0; Other Eukaryotes - 127
(source: NCBI BLink).		 -0.65 0.32 -0.33
77 AT3G01980 NAD(P)-binding Rossmann-fold superfamily protein -0.65 0.32 -0.31
78 AT4G01510 Arv1-like protein ARV2 -0.65 0.31 -0.32
79 AT3G18270 cytochrome P450, family 77, subfamily A, polypeptide 5
pseudogene		 cytochrome P450, family 77,
subfamily A, polypeptide 5
pseudogene		 -0.63 0.31 -0.31
80 AT2G01680 Ankyrin repeat family protein -0.63 0.32 -0.32
81 AT3G09600 Homeodomain-like superfamily protein LHY-CCA1-LIKE5, REVEILLE 8 -0.63 0.32 -0.32
82 AT5G54660 HSP20-like chaperones superfamily protein -0.63 0.31 -0.31
83 AT1G35340 ATP-dependent protease La (LON) domain protein -0.63 0.31 -0.32
84 AT3G11620 alpha/beta-Hydrolases superfamily protein -0.62 0.29 -0.34
85 AT1G78550 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.62 0.31 -0.31
86 AT4G24740 FUS3-complementing gene 2 FUS3-complementing gene 2, AME1,
FUS3-complementing gene 2		 -0.62 0.31 -0.32
87 AT2G03310 unknown protein; Has 17 Blast hits to 17 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.61 0.32 -0.28
88 AT5G24655 response to low sulfur 4 RESPONSE TO LOW SULFUR 4 -0.61 0.31 -0.32
89 AT5G52880 F-box family protein -0.61 0.3 -0.31
90 AT5G48640 Cyclin family protein -0.61 0.31 -0.31
91 AT4G22840 Sodium Bile acid symporter family -0.6 0.31 -0.34
92 AT5G09740 histone acetyltransferase of the MYST family 2 histone acetyltransferase of the
MYST family 2		 -0.6 0.32 -0.32
93 AT5G14500 aldose 1-epimerase family protein -0.6 0.32 -0.31
94 AT5G11780 unknown protein; Has 37 Blast hits to 37 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3;
Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.59 0.31 -0.3
95 AT2G21970 stress enhanced protein 2 stress enhanced protein 2 -0.59 0.32 -0.33
96 AT5G66670 Protein of unknown function (DUF677) -0.59 0.33 -0.32
97 AT3G09410 Pectinacetylesterase family protein -0.59 0.33 -0.31
98 AT3G49920 voltage dependent anion channel 5 ARABIDOPSIS THALIANA VOLTAGE
DEPENDENT ANION CHANNEL 5, voltage
dependent anion channel 5		 -0.59 0.3 -0.33
99 AT5G58120 Disease resistance protein (TIR-NBS-LRR class) family -0.59 0.31 -0.32
100 AT4G19670 RING/U-box superfamily protein -0.58 0.31 -0.3
101 AT5G09300 Thiamin diphosphate-binding fold (THDP-binding) superfamily
protein		 -0.58 0.29 -0.29
102 AT2G18470 roline-rich extensin-like receptor kinase 4 proline-rich extensin-like
receptor kinase 4, proline-rich
extensin-like receptor kinase 4		 -0.58 0.3 -0.3