AT1G22020 : serine hydroxymethyltransferase 6
Query Information
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AGICode AT1G22020
Description serine hydroxymethyltransferase 6
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G22020 serine hydroxymethyltransferase 6 serine hydroxymethyltransferase 6 1 0.32 -0.31
2 AT1G06420 unknown protein; Has 1017 Blast hits to 654 proteins in 124
species: Archae - 0; Bacteria - 39; Metazoa - 232; Fungi -
69; Plants - 40; Viruses - 0; Other Eukaryotes - 637
(source: NCBI BLink).		 -0.81 0.33 -0.3
3 AT1G51710 ubiquitin-specific protease 6 ATUBP6, ubiquitin-specific
protease 6		 0.8 0.32 -0.33
4 AT1G15860 Domain of unknown function (DUF298) 0.78 0.33 -0.32
5 AT5G16010 3-oxo-5-alpha-steroid 4-dehydrogenase family protein 0.78 0.32 -0.3
6 AT2G40090 ABC2 homolog 9 ABC2 homolog 9, ABC2 homolog 9 0.77 0.31 -0.32
7 AT2G28130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 13 growth stages; Has 35333
Blast hits to 34131 proteins in 2444 species: Archae - 798;
Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531;
Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).		 0.76 0.32 -0.31
8 AT1G16070 tubby like protein 8 tubby like protein 8, tubby like
protein 8		 -0.76 0.3 -0.32
9 AT5G15640 Mitochondrial substrate carrier family protein 0.76 0.34 -0.31
10 AT2G34630 geranyl diphosphate synthase 1 GERANYLPYROPHOSPHATE SYNTHASE,
geranyl diphosphate synthase 1		 0.76 0.32 -0.33
11 AT5G38980 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 3 Blast hits to 3
proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.75 0.29 -0.31
12 AT5G49480 Ca2+-binding protein 1 Ca2+-binding protein 1,
Ca2+-binding protein 1		 0.75 0.33 -0.29
13 AT5G58930 Protein of unknown function (DUF740) -0.74 0.3 -0.31
14 AT1G43890 RAB GTPASE HOMOLOG B18 ARABIDOPSIS RAB GTPASE HOMOLOG C1,
ARABIDOPSIS RAB GTPASE HOMOLOG
B18, ARABIDOPSIS RAB GTPASE
HOMOLOG C1, RAB GTPASE HOMOLOG
B18, RAB GTPASE HOMOLOG 18-1, RAB
GTPASE HOMOLOG C1		 0.74 0.3 -0.32
15 AT3G62400 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.74 0.31 -0.31
16 AT1G66580 senescence associated gene 24 ribosomal protein L10 C,
senescence associated gene 24		 0.74 0.29 -0.3
17 AT2G45060 Uncharacterised conserved protein UCP022280 0.74 0.34 -0.31
18 AT2G24100 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G30780.1); Has 101 Blast hits
to 101 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other
Eukaryotes - 6 (source: NCBI BLink).		 ALTERED SEED GERMINATION 1 0.74 0.3 -0.31
19 AT2G30270 Protein of unknown function (DUF567) 0.73 0.32 -0.31
20 AT4G34160 CYCLIN D3;1 CYCD3, CYCLIN D3;1 -0.73 0.3 -0.3
21 AT5G64400 CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625); BEST
Arabidopsis thaliana protein match is: Cox19-like CHCH
family protein (TAIR:AT5G09570.1); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.72 0.31 -0.3
22 AT4G15420 Ubiquitin fusion degradation UFD1 family protein 0.72 0.34 -0.31
23 AT3G09350 Fes1A Fes1A 0.72 0.32 -0.31
24 AT1G10940 Protein kinase superfamily protein ARABIDOPSIS SERINE/THREONINE
KINASE 1, SUCROSE NONFERMENTING
1-RELATED PROTEIN KINASE 2-4,
SNF1-related protein kinase 2.4,
SRK2A		 0.72 0.35 -0.31
25 AT4G17530 RAB GTPase homolog 1C RAB GTPase homolog 1C, ATRABD2C,
RAB1C, RAB GTPase homolog 1C		 0.72 0.3 -0.32
26 AT5G11860 SCP1-like small phosphatase 5 SCP1-like small phosphatase 5 0.71 0.35 -0.3
27 AT3G43520 Transmembrane proteins 14C 0.71 0.34 -0.31
28 AT4G04210 plant UBX domain containing protein 4 plant UBX domain containing
protein 4		 0.71 0.32 -0.31
29 AT1G67750 Pectate lyase family protein -0.71 0.31 -0.32
30 AT4G12240 zinc finger (C2H2 type) family protein 0.7 0.3 -0.31
31 AT3G10380 subunit of exocyst complex 8 SUBUNIT OF EXOCYST COMPLEX 8,
subunit of exocyst complex 8		 0.7 0.31 -0.31
32 AT1G28200 FH interacting protein 1 FH interacting protein 1 0.7 0.3 -0.32
33 AT5G10780 CONTAINS InterPro DOMAIN/s: Uncharacterised conserved
protein UCP017207, transmembrane protein 85
(InterPro:IPR016687), Protein of unknown function DUF1077
(InterPro:IPR009445); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.7 0.31 -0.32
34 AT5G06940 Leucine-rich repeat receptor-like protein kinase family
protein		 -0.69 0.31 -0.33
35 AT5G53650 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 0.69 0.32 -0.28
36 AT1G51350 ARM repeat superfamily protein 0.69 0.31 -0.3
37 AT1G23550 similar to RCD one 2 similar to RCD one 2 0.69 0.31 -0.3
38 AT5G52580 RabGAP/TBC domain-containing protein 0.68 0.3 -0.31
39 AT4G03240 frataxin homolog ATFH, frataxin homolog 0.68 0.33 -0.3
40 AT3G29170 Eukaryotic protein of unknown function (DUF872) 0.68 0.32 -0.33
41 AT2G34250 SecY protein transport family protein 0.68 0.34 -0.32
42 AT4G19140 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.68 0.32 -0.31
43 AT4G07990 Chaperone DnaJ-domain superfamily protein 0.67 0.31 -0.3
44 AT3G19590 Transducin/WD40 repeat-like superfamily protein BUB (BUDDING UNINHIBITED BY
BENZYMIDAZOL) 3.1		 -0.67 0.29 -0.33
45 AT1G64550 general control non-repressible 3 ATP-binding cassette F3, AtABCF3,
AtGCN20, general control
non-repressible 3, general control
non-repressible 20, general
control non-repressible 3,
susceptible to
coronatine-deficient Pst DC3000 5		 0.67 0.31 -0.31
46 AT4G02350 exocyst complex component sec15B exocyst complex component sec15B 0.67 0.3 -0.33
47 AT2G37790 NAD(P)-linked oxidoreductase superfamily protein Aldo-keto reductase family 4
member C10		 -0.67 0.33 -0.32
48 AT4G20300 Protein of unknown function (DUF1639) 0.67 0.31 -0.33
49 AT1G35670 calcium-dependent protein kinase 2 calcium-dependent protein kinase
2, ATCPK11, calcium-dependent
protein kinase 2, CPK11		 0.67 0.32 -0.33
50 AT1G80790 XH/XS domain-containing protein factor of DNA methylation 5 -0.66 0.3 -0.33
51 AT1G19960 BEST Arabidopsis thaliana protein match is: transmembrane
receptors (TAIR:AT2G32140.1); Has 41 Blast hits to 41
proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa -
23; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes -
5 (source: NCBI BLink).		 -0.65 0.31 -0.32
52 AT1G03400 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.65 0.31 -0.31
53 AT1G77580 Plant protein of unknown function (DUF869) -0.65 0.34 -0.31
54 AT3G61210 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.64 0.32 -0.3
55 AT3G60840 microtubule-associated protein 65-4 microtubule-associated protein
65-4		 -0.64 0.33 -0.31
56 AT5G25130 cytochrome P450, family 71, subfamily B, polypeptide 12 cytochrome P450, family 71,
subfamily B, polypeptide 12		 -0.63 0.3 -0.3
57 AT5G22700 F-box/RNI-like/FBD-like domains-containing protein -0.62 0.32 -0.33
58 AT3G56400 WRKY DNA-binding protein 70 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 70, WRKY
DNA-binding protein 70		 -0.62 0.32 -0.3
59 AT5G07080 HXXXD-type acyl-transferase family protein -0.61 0.33 -0.32
60 AT4G24970 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
family protein		 -0.61 0.32 -0.31
61 AT1G76540 cyclin-dependent kinase B2;1 cyclin-dependent kinase B2;1 -0.61 0.33 -0.33
62 AT1G23000 Heavy metal transport/detoxification superfamily protein -0.6 0.31 -0.31
63 AT5G11780 unknown protein; Has 37 Blast hits to 37 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3;
Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.6 0.34 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
64 C0155 Monogalactosyldiacylgycerol-36:4 - a Monogalactosyldiacylgycerol glycolipid biosynthesis,
triacylglycerol degradation,
linoleate biosynthesis I,
glutathione redox reactions I 		-0.64 0.34 -0.33