AT1G22270 : -
Query Information
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AGICode AT1G22270
Description Trm112p-like protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G22270 Trm112p-like protein 1 0.31 -0.32
2 AT5G09510 Ribosomal protein S19 family protein 0.88 0.3 -0.32
3 AT2G45710 Zinc-binding ribosomal protein family protein 0.87 0.3 -0.3
4 AT2G19540 Transducin family protein / WD-40 repeat family protein 0.87 0.32 -0.32
5 AT4G30220 small nuclear ribonucleoprotein F small nuclear ribonucleoprotein F 0.86 0.29 -0.32
6 AT1G08580 unknown protein; Has 39 Blast hits to 39 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 35; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.86 0.31 -0.3
7 AT1G51510 RNA-binding (RRM/RBD/RNP motifs) family protein Y14 0.86 0.31 -0.3
8 AT2G19750 Ribosomal protein S30 family protein 0.86 0.29 -0.3
9 AT1G54770 Fcf2 pre-rRNA processing protein 0.85 0.34 -0.28
10 AT2G41840 Ribosomal protein S5 family protein 0.85 0.32 -0.31
11 AT2G27530 Ribosomal protein L1p/L10e family PIGGYBACK1 0.85 0.3 -0.3
12 AT2G31410 unknown protein; Has 1719 Blast hits to 1091 proteins in
184 species: Archae - 5; Bacteria - 24; Metazoa - 559;
Fungi - 169; Plants - 192; Viruses - 1; Other Eukaryotes -
769 (source: NCBI BLink).		 0.85 0.31 -0.33
13 AT5G22650 histone deacetylase 2B ARABIDOPSIS HISTONE DEACETYLASE 2,
ATHD2B, HISTONE DEACETYLASE 2,
histone deacetylase 2B, HDA4,
HDT02, HDT2		 0.85 0.33 -0.3
14 AT5G41970 Metal-dependent protein hydrolase 0.84 0.28 -0.3
15 AT2G19740 Ribosomal protein L31e family protein 0.84 0.32 -0.34
16 AT4G34670 Ribosomal protein S3Ae 0.83 0.32 -0.32
17 AT1G44835 YbaK/aminoacyl-tRNA synthetase-associated domain 0.83 0.32 -0.32
18 AT5G08180 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.83 0.31 -0.31
19 AT5G02880 ubiquitin-protein ligase 4 ubiquitin-protein ligase 4 -0.83 0.32 -0.31
20 AT2G44510 CDK inhibitor P21 binding protein 0.83 0.33 -0.3
21 AT2G27710 60S acidic ribosomal protein family 0.82 0.32 -0.31
22 AT5G60990 DEA(D/H)-box RNA helicase family protein 0.82 0.32 -0.33
23 AT2G27720 60S acidic ribosomal protein family 0.82 0.31 -0.33
24 AT5G58230 Transducin/WD40 repeat-like superfamily protein ARABIDOPSIS MULTICOPY SUPRESSOR OF
IRA1, MATERNAL EFFECT EMBRYO
ARREST 70, MULTICOPY SUPRESSOR OF
IRA1		 0.82 0.31 -0.33
25 AT4G33865 Ribosomal protein S14p/S29e family protein 0.82 0.32 -0.32
26 AT3G12860 NOP56-like pre RNA processing ribonucleoprotein 0.82 0.31 -0.31
27 AT2G44860 Ribosomal protein L24e family protein 0.82 0.32 -0.32
28 AT3G10610 Ribosomal S17 family protein 0.82 0.32 -0.31
29 AT3G22300 ribosomal protein S10 ribosomal protein S10 0.82 0.31 -0.3
30 AT1G04170 eukaryotic translation initiation factor 2 gamma subunit eukaryotic translation initiation
factor 2 gamma subunit		 0.82 0.33 -0.31
31 AT3G25940 TFIIB zinc-binding protein 0.81 0.32 -0.33
32 AT5G58420 Ribosomal protein S4 (RPS4A) family protein 0.81 0.33 -0.32
33 AT3G07170 Sterile alpha motif (SAM) domain-containing protein 0.81 0.3 -0.33
34 AT1G24510 TCP-1/cpn60 chaperonin family protein 0.81 0.31 -0.32
35 AT5G67630 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.81 0.32 -0.3
36 AT1G28395 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast
hits to 89 proteins in 11 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.81 0.33 -0.32
37 AT4G33250 eukaryotic translation initiation factor 3K ATTIF3K1, eukaryotic translation
initiation factor 3K, TIF3K1		 0.81 0.31 -0.3
38 AT2G02880 mucin-related 0.81 0.32 -0.31
39 AT2G46230 PIN domain-like family protein 0.8 0.33 -0.32
40 AT2G26060 Transducin/WD40 repeat-like superfamily protein embryo defective 1345 0.8 0.31 -0.31
41 AT2G43460 Ribosomal L38e protein family 0.8 0.31 -0.33
42 AT2G32220 Ribosomal L27e protein family 0.8 0.3 -0.3
43 AT1G11240 CONTAINS InterPro DOMAIN/s: Nucleolar protein 12
(InterPro:IPR019186); Has 2484 Blast hits to 1934 proteins
in 262 species: Archae - 0; Bacteria - 90; Metazoa - 921;
Fungi - 378; Plants - 144; Viruses - 18; Other Eukaryotes -
933 (source: NCBI BLink).		 0.8 0.31 -0.34
44 AT1G20370 Pseudouridine synthase family protein 0.79 0.33 -0.31
45 AT2G34570 PIN domain-like family protein maternal effect embryo arrest 21 0.79 0.31 -0.32
46 AT4G26430 COP9 signalosome subunit 6B COP9 signalosome subunit 6B 0.79 0.31 -0.33
47 AT4G20890 tubulin beta-9 chain tubulin beta-9 chain 0.79 0.32 -0.32
48 AT5G06360 Ribosomal protein S8e family protein 0.79 0.31 -0.31
49 AT1G52930 Ribosomal RNA processing Brix domain protein 0.79 0.33 -0.31
50 AT2G39795 Mitochondrial glycoprotein family protein 0.79 0.32 -0.33
51 AT3G05060 NOP56-like pre RNA processing ribonucleoprotein 0.79 0.31 -0.3
52 AT5G27470 seryl-tRNA synthetase / serine--tRNA ligase 0.79 0.31 -0.32
53 AT3G49990 unknown protein; Has 1524 Blast hits to 1298 proteins in
225 species: Archae - 9; Bacteria - 84; Metazoa - 474;
Fungi - 184; Plants - 98; Viruses - 17; Other Eukaryotes -
658 (source: NCBI BLink).		 0.78 0.31 -0.32
54 AT5G59180 DNA-directed RNA polymerase II NRPB7 0.78 0.31 -0.32
55 AT3G15460 Ribosomal RNA processing Brix domain protein 0.78 0.31 -0.3
56 AT5G11630 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G17310.1); Has 90 Blast
hits to 90 proteins in 10 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.78 0.34 -0.31
57 AT4G22380 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.78 0.3 -0.32
58 AT1G31817 Ribosomal L18p/L5e family protein NUCLEAR FUSION DEFECTIVE 3 0.78 0.31 -0.3
59 AT1G32440 plastidial pyruvate kinase 3 plastidial pyruvate kinase 3 0.77 0.3 -0.32
60 AT2G45860 unknown protein; Has 32 Blast hits to 32 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.77 0.32 -0.3
61 AT4G18070 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G29530.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.77 0.3 -0.31
62 AT3G19360 Zinc finger (CCCH-type) family protein 0.77 0.33 -0.31
63 AT1G77750 Ribosomal protein S13/S18 family 0.77 0.33 -0.35
64 AT5G14250 Proteasome component (PCI) domain protein CONSTITUTIVE PHOTOMORPHOGENIC 13,
COP9 SIGNALOSOME SUBUNIT 3, FUSCA
11		 0.77 0.31 -0.33
65 AT4G38060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G65480.1); Has 63 Blast hits
to 63 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.75 0.3 -0.32
66 AT4G23980 auxin response factor 9 auxin response factor 9 -0.75 0.33 -0.32
67 AT4G19160 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.75 0.34 -0.32
68 AT1G22370 UDP-glucosyl transferase 85A5 UDP-glucosyl transferase 85A5,
UDP-glucosyl transferase 85A5		 -0.74 0.3 -0.32
69 AT2G25590 Plant Tudor-like protein -0.73 0.33 -0.31
70 AT3G02300 Regulator of chromosome condensation (RCC1) family protein -0.72 0.31 -0.33
71 AT1G29400 MEI2-like protein 5 MEI2-like protein 5, MEI2-like
protein 5		 -0.72 0.29 -0.31
72 AT2G14520 CBS domain-containing protein with a domain of unknown
function (DUF21)		 -0.71 0.33 -0.31
73 AT1G04440 casein kinase like 13 casein kinase like 13 -0.7 0.29 -0.31
74 AT4G24450 phosphoglucan, water dikinase ATGWD2, GWD3, phosphoglucan, water
dikinase		 -0.7 0.3 -0.31
75 AT1G02960 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G02965.1); Has 83 Blast hits
to 82 proteins in 37 species: Archae - 0; Bacteria - 2;
Metazoa - 20; Fungi - 7; Plants - 29; Viruses - 0; Other
Eukaryotes - 25 (source: NCBI BLink).		 -0.7 0.31 -0.32
76 AT4G04740 calcium-dependent protein kinase 23 ATCPK23, calcium-dependent protein
kinase 23		 -0.69 0.31 -0.32
77 AT5G58200 Calcineurin-like metallo-phosphoesterase superfamily
protein		 -0.68 0.31 -0.31
78 AT3G59300 Pentatricopeptide repeat (PPR) superfamily protein -0.68 0.33 -0.31
79 AT1G48430 Dihydroxyacetone kinase -0.68 0.3 -0.33
80 AT1G78130 Major facilitator superfamily protein unfertilized embryo sac 2 -0.68 0.31 -0.32
81 AT1G14790 RNA-dependent RNA polymerase 1 ATRDRP1, RNA-dependent RNA
polymerase 1		 -0.67 0.33 -0.32
82 AT4G15475 F-box/RNI-like superfamily protein -0.67 0.31 -0.31
83 AT2G36960 TSL-kinase interacting protein 1 TSL-kinase interacting protein 1 -0.66 0.28 -0.31
84 AT1G24190 SIN3-like 3 ARABIDOPSIS THALIANA SIN3 HOMOLOG,
ARABIDOPSIS THALIANA SIN3 HOMOLOG,
SIN3-like 3		 -0.65 0.31 -0.32
85 AT5G19310 Homeotic gene regulator -0.65 0.31 -0.32
86 AT3G17980 Calcium-dependent lipid-binding (CaLB domain) family
protein		 Arabidopsis thaliana C2 domain, C2
domain		 -0.63 0.33 -0.33
87 AT2G17975 zinc finger (Ran-binding) family protein -0.63 0.32 -0.31
88 AT1G72650 TRF-like 6 TRF-like 6 -0.63 0.31 -0.31
89 AT1G59520 CW7 CW7 -0.63 0.31 -0.34
90 AT1G59820 aminophospholipid ATPase 3 aminophospholipid ATPase 3 -0.63 0.33 -0.31
91 AT1G60260 beta glucosidase 5 beta glucosidase 5 -0.63 0.32 -0.31
92 AT5G58510 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 14 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G55060.2); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.62 0.32 -0.32
93 AT5G45090 phloem protein 2-A7 phloem protein 2-A7, phloem
protein 2-A7		 -0.62 0.3 -0.32
94 AT3G09600 Homeodomain-like superfamily protein LHY-CCA1-LIKE5, REVEILLE 8 -0.62 0.33 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
95 C0032 3-Phosphoglyceric acid 3-Phospho-(R)-glyceric acid 3-Phosphoglycerate glycolysis I,
gluconeogenesis I,
Calvin-Benson-Bassham cycle,
sucrose biosynthesis I,
serine biosynthesis,
photorespiration,
Rubisco shunt,
glycolysis IV (plant cytosol) 		-0.66 0.47 -0.45 C0032
96 C0053 ADP - ADP phosphatidylcholine biosynthesis I,
mannitol degradation II,
lipid IVA biosynthesis,
stachyose degradation,
Rubisco shunt,
copper transport II,
glycerol degradation IV,
chorismate biosynthesis,
folate polyglutamylation II,
galactose degradation III,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis,
UDP-L-arabinose biosynthesis II (from L-arabinose),
cadmium transport I,
folate polyglutamylation,
coenzyme A biosynthesis,
sulfate activation for sulfonation,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
pyrimidine deoxyribonucleotides de novo biosynthesis I,
galactose degradation II,
inosine-5'-phosphate biosynthesis II,
ribose degradation,
acetyl-CoA biosynthesis (from citrate),
inositol pyrophosphates biosynthesis,
fatty acid biosynthesis initiation I,
xylose degradation I,
adenine and adenosine salvage VI,
TCA cycle variation III (eukaryotic),
tetrahydrofolate biosynthesis II,
phosphatidylethanolamine biosynthesis II,
pyridoxal 5'-phosphate salvage pathway,
citrulline biosynthesis,
trans-zeatin biosynthesis,
glutamine biosynthesis I,
arginine biosynthesis II (acetyl cycle),
L-Ndelta-acetylornithine biosynthesis,
mevalonate pathway I,
methionine biosynthesis II,
trehalose degradation II (trehalase),
citrulline degradation,
methionine salvage pathway,
TCA cycle variation V (plant),
chlorophyllide a biosynthesis I,
starch degradation I,
methylerythritol phosphate pathway,
pyridine nucleotide cycling (plants),
ceramide degradation,
biotin-carboxyl carrier protein assembly,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
UDP-D-galacturonate biosynthesis II (from D-galacturonate),
asparagine biosynthesis III (tRNA-dependent),
superpathway of glyoxylate cycle and fatty acid degradation,
NAD/NADH phosphorylation and dephosphorylation,
1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3),
galactose degradation I (Leloir pathway),
uridine-5'-phosphate biosynthesis,
lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3),
sucrose degradation III,
lysine biosynthesis VI,
sphingolipid biosynthesis (plants),
choline biosynthesis I,
GDP-glucose biosynthesis,
photorespiration,
gamma-glutamyl cycle (plant pathway),
5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
thiamine biosynthesis II,
proline biosynthesis III,
glutathione biosynthesis,
folate transformations II,
ornithine biosynthesis,
diphthamide biosynthesis,
S-methyl-5'-thioadenosine degradation I,
starch biosynthesis,
arginine biosynthesis I,
homoserine biosynthesis,
flavin biosynthesis I (bacteria and plants),
sucrose biosynthesis I,
leucine degradation I,
glycolysis I,
pyrimidine ribonucleotides interconversion,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza),
glycolysis IV (plant cytosol),
Calvin-Benson-Bassham cycle,
UDP-D-glucuronate biosynthesis (from myo-inositol),
guanine and guanosine salvage III,
glutamine biosynthesis III,
L-glutamine biosynthesis II (tRNA-dependent),
GDP-L-fucose biosynthesis II (from L-fucose),
nitrate reduction II (assimilatory),
ammonia assimilation cycle II,
gluconeogenesis I,
threonine biosynthesis from homoserine,
mannose degradation,
urea cycle,
lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3),
biotin biosynthesis II 		-0.66 0.44 -0.44 C0053