AT1G66620 : -
Query Information
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AGICode AT1G66620
Description Protein with RING/U-box and TRAF-like domains
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G66620 Protein with RING/U-box and TRAF-like domains 1 0.34 -0.3
2 AT1G64190 6-phosphogluconate dehydrogenase family protein 0.81 0.33 -0.31
3 AT1G59960 NAD(P)-linked oxidoreductase superfamily protein 0.78 0.31 -0.32
4 AT5G38630 cytochrome B561-1 cytochrome B561-1, cytochrome
B561-1		 0.76 0.33 -0.32
5 AT5G15980 Pentatricopeptide repeat (PPR) superfamily protein 0.76 0.32 -0.32
6 AT5G49840 ATP-dependent Clp protease -0.74 0.3 -0.33
7 AT5G27990 Pre-rRNA-processing protein TSR2, conserved region 0.74 0.32 -0.31
8 AT5G02100 Oxysterol-binding family protein OSBP(OXYSTEROL BINDING
PROTEIN)-RELATED PROTEIN 3A,
UNFERTILIZED EMBRYO SAC 18		 0.74 0.32 -0.31
9 AT1G61870 pentatricopeptide repeat 336 pentatricopeptide repeat 336 0.73 0.32 -0.32
10 AT1G64490 DEK, chromatin associated protein 0.73 0.32 -0.32
11 AT3G08020 PHD finger family protein -0.72 0.32 -0.31
12 AT1G65290 mitochondrial acyl carrier protein 2 mitochondrial acyl carrier protein
2		 0.71 0.32 -0.3
13 AT4G33360 NAD(P)-binding Rossmann-fold superfamily protein farnesol dehydrogenase 0.71 0.32 -0.32
14 AT3G53880 NAD(P)-linked oxidoreductase superfamily protein Aldo-keto reductase family 4
member C11		 0.7 0.31 -0.32
15 AT5G05890 UDP-Glycosyltransferase superfamily protein 0.7 0.32 -0.29
16 AT1G43170 ribosomal protein 1 ribosomal protein 1, embryo
defective 2207, ribosomal protein
1, RPL3A		 0.7 0.3 -0.31
17 AT4G22720 Actin-like ATPase superfamily protein 0.7 0.31 -0.33
18 AT3G55170 Ribosomal L29 family protein 0.69 0.32 -0.33
19 AT5G02310 proteolysis 6 proteolysis 6 -0.69 0.33 -0.33
20 AT4G27270 Quinone reductase family protein 0.69 0.28 -0.32
21 AT5G60950 COBRA-like protein 5 precursor COBRA-like protein 5 precursor 0.68 0.32 -0.3
22 AT4G35850 Pentatricopeptide repeat (PPR) superfamily protein 0.68 0.33 -0.3
23 AT3G42680 transposable element gene 0.68 0.33 -0.31
24 ATCG00530 CemA-like proton extrusion protein-related YCF10 -0.67 0.29 -0.31
25 AT1G74030 enolase 1 enolase 1 0.67 0.33 -0.31
26 AT4G13050 Acyl-ACP thioesterase 0.67 0.31 -0.32
27 AT5G15360 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.66 0.29 -0.31
28 AT1G47250 20S proteasome alpha subunit F2 20S proteasome alpha subunit F2 0.66 0.31 -0.32
29 AT1G78970 lupeol synthase 1 ARABIDOPSIS THALIANA LUPEOL
SYNTHASE 1, lupeol synthase 1		 0.66 0.34 -0.3
30 AT3G57300 INO80 ortholog INO80 ORTHOLOG, INO80 ortholog -0.65 0.33 -0.32
31 AT1G68760 nudix hydrolase 1 ARABIDOPSIS THALIANA NUDIX
HYDROLASE HOMOLOG 1, nudix
hydrolase 1, nudix hydrolase 1,
NUDIX HYDROLASE 1		 -0.65 0.32 -0.31
32 AT1G48840 Plant protein of unknown function (DUF639) -0.65 0.31 -0.32
33 AT4G09150 T-complex protein 11 -0.64 0.32 -0.31
34 AT1G52760 lysophospholipase 2 lysophospholipase 2 0.64 0.32 -0.31
35 AT3G17920 Outer arm dynein light chain 1 protein -0.64 0.31 -0.34
36 AT1G65370 TRAF-like family protein 0.64 0.31 -0.31
37 AT1G63880 Disease resistance protein (TIR-NBS-LRR class) family 0.63 0.3 -0.31
38 AT5G64060 NAC domain containing protein 103 NAC domain containing protein 103,
NAC domain containing protein 103		 0.63 0.31 -0.31
39 AT1G20050 C-8,7 sterol isomerase HYDRA1 0.63 0.31 -0.3
40 AT5G22450 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G19390.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.63 0.32 -0.31
41 AT1G61730 DNA-binding storekeeper protein-related transcriptional
regulator		 0.63 0.32 -0.31
42 AT5G20300 Avirulence induced gene (AIG1) family protein translocon at the outer envelope
membrane of chloroplasts 90		 -0.63 0.31 -0.32
43 AT5G08565 Transcription initiation Spt4-like protein 0.63 0.33 -0.31
44 ATCG00690 photosystem II reaction center protein T photosystem II reaction center
protein T, PSBTC		 -0.63 0.33 -0.32
45 AT5G13640 phospholipid:diacylglycerol acyltransferase ARABIDOPSIS THALIANA
PHOSPHOLIPID:DIACYLGLYCEROL
ACYLTRANSFERASE,
phospholipid:diacylglycerol
acyltransferase,
PHOSPHOLIPID:DIACYLGLYCEROL
ACYLTRANSFERASE 1		 -0.62 0.31 -0.31
46 AT1G67550 urease urease 0.62 0.32 -0.31
47 ATCG00520 unfolded protein binding YCF4 -0.62 0.3 -0.3
48 AT3G54230 suppressor of abi3-5 suppressor of abi3-5 -0.62 0.31 -0.31
49 AT1G59900 pyruvate dehydrogenase complex E1 alpha subunit pyruvate dehydrogenase complex E1
alpha subunit, pyruvate
dehydrogenase complex E1 alpha
subunit		 0.62 0.3 -0.33
50 AT1G75310 auxin-like 1 protein auxilin-like 1 -0.62 0.32 -0.29
51 AT1G13950 eukaryotic elongation factor 5A-1 EUKARYOTIC ELONGATION FACTOR 5A-1,
EIF-5A, EUKARYOTIC ELONGATION
FACTOR 5A, eukaryotic elongation
factor 5A-1		 0.62 0.31 -0.33
52 AT1G52260 PDI-like 1-5 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 3, PDI-like
1-5, PROTEIN DISULFIDE ISOMERASE
3, PDI-like 1-5		 0.62 0.3 -0.3
53 AT4G01790 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.61 0.32 -0.31
54 AT5G35730 EXS (ERD1/XPR1/SYG1) family protein 0.61 0.32 -0.32
55 ATCG00510 photsystem I subunit I photsystem I subunit I -0.61 0.31 -0.32
56 AT1G03210 Phenazine biosynthesis PhzC/PhzF protein 0.61 0.3 -0.31
57 AT5G35450 Disease resistance protein (CC-NBS-LRR class) family 0.61 0.32 -0.33
58 AT4G25100 Fe superoxide dismutase 1 ARABIDOPSIS FE SUPEROXIDE
DISMUTASE 1, Fe superoxide
dismutase 1		 0.61 0.34 -0.3
59 AT5G05760 syntaxin of plants 31 ATSED5, ATSYP31, T-SNARE SED 5,
syntaxin of plants 31		 0.61 0.32 -0.29
60 AT1G80970 XH domain-containing protein 0.61 0.32 -0.32
61 AT4G11110 SPA1-related 2 SPA1-related 2 -0.6 0.35 -0.33
62 AT1G58150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: in 9 processes; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 1 Blast hits to 1 proteins in
1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.6 0.33 -0.32
63 AT4G35780 ACT-like protein tyrosine kinase family protein serine/threonine/tyrosine kinase
17		 -0.6 0.31 -0.32
64 AT1G62830 LSD1-like 1 ARABIDOPSIS LYSINE-SPECIFIC
HISTONE DEMETHYLASE, ATSWP1,
LSD1-like 1, LYSINE-SPECIFIC
HISTONE DEMETHYLASE, SWP1		 0.6 0.33 -0.31
65 AT5G17880 disease resistance protein (TIR-NBS-LRR class) constitutive shade-avoidance1 0.6 0.34 -0.31
66 AT2G24520 H(+)-ATPase 5 H(+)-ATPase 5, H(+)-ATPase 5 -0.6 0.33 -0.33
67 AT4G27820 beta glucosidase 9 beta glucosidase 9 -0.59 0.28 -0.31
68 AT1G79890 RAD3-like DNA-binding helicase protein 0.59 0.31 -0.31
69 AT4G32760 ENTH/VHS/GAT family protein -0.59 0.3 -0.32
70 AT1G74320 Protein kinase superfamily protein 0.59 0.32 -0.32
71 AT5G08600 U3 ribonucleoprotein (Utp) family protein 0.59 0.31 -0.31
72 AT2G03150 ATP/GTP-binding protein family embryo defective 1579 -0.59 0.31 -0.32
73 AT4G05460 RNI-like superfamily protein 0.59 0.31 -0.32
74 AT4G25520 SEUSS-like 1 SEUSS-like 1 -0.59 0.31 -0.31
75 AT5G55170 small ubiquitin-like modifier 3 ATSUMO3, SMALL UBIQUITIN-LIKE
MODIFIER 3, SMALL UBIQUITIN-LIKE
MODIFIER 3, small ubiquitin-like
modifier 3		 0.59 0.31 -0.33
76 AT1G65280 DNAJ heat shock N-terminal domain-containing protein 0.59 0.32 -0.3
77 AT3G05670 RING/U-box protein -0.59 0.33 -0.32
78 AT5G37180 sucrose synthase 5 ARABIDOPSIS THALIANA SUCROSE
SYNTHASE 5, sucrose synthase 5		 -0.58 0.31 -0.31
79 AT4G35230 BR-signaling kinase 1 BR-signaling kinase 1 -0.58 0.31 -0.33
80 AT4G28260 unknown protein; Has 50 Blast hits to 42 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0;
Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.58 0.33 -0.3
81 AT5G36250 Protein phosphatase 2C family protein -0.58 0.3 -0.3
82 AT3G20880 WIP domain protein 4 WIP domain protein 4 0.58 0.32 -0.29
83 AT5G40950 ribosomal protein large subunit 27 ribosomal protein large subunit 27 0.57 0.31 -0.32
84 AT4G02450 HSP20-like chaperones superfamily protein 0.57 0.3 -0.31
85 AT4G19240 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G43280.1); Has 19 Blast hits
to 17 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.57 0.33 -0.32
86 ATCG00120 ATP synthase subunit alpha ATP synthase subunit alpha -0.57 0.32 -0.3
87 AT1G68490 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G13390.2); Has 125 Blast
hits to 125 proteins in 18 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.57 0.31 -0.34
88 AT5G37290 ARM repeat superfamily protein 0.57 0.33 -0.32
89 AT1G63540 hydroxyproline-rich glycoprotein family protein -0.57 0.32 -0.33
90 ATCG00380 chloroplast ribosomal protein S4 chloroplast ribosomal protein S4 -0.57 0.32 -0.29
91 AT2G02570 nucleic acid binding;RNA binding -0.56 0.31 -0.31
92 AT1G49950 telomere repeat binding factor 1 TELOMERE REPEAT BINDING FACTOR 1,
telomere repeat binding factor 1		 0.56 0.32 -0.31
93 AT3G17750 Protein kinase superfamily protein -0.56 0.35 -0.33
94 AT1G64270 transposable element gene 0.56 0.32 -0.3
95 AT4G27050 F-box/RNI-like superfamily protein -0.56 0.33 -0.3
96 AT1G01440 Protein of unknown function (DUF3133) -0.56 0.32 -0.32
97 AT1G59970 Matrixin family protein 0.56 0.3 -0.31
98 AT5G25170 PPPDE putative thiol peptidase family protein 0.56 0.31 -0.32
99 AT2G01720 Ribophorin I 0.56 0.32 -0.32
100 AT5G38220 alpha/beta-Hydrolases superfamily protein -0.55 0.32 -0.29
101 AT3G27530 golgin candidate 6 golgin candidate 6, MAIGO 4 -0.55 0.3 -0.31
102 AT4G26630 DEK domain-containing chromatin associated protein -0.55 0.33 -0.31
103 AT5G13950 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G02290.1); Has 147 Blast hits
to 145 proteins in 44 species: Archae - 0; Bacteria - 2;
Metazoa - 56; Fungi - 6; Plants - 81; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 -0.54 0.33 -0.32
104 AT4G22280 F-box/RNI-like superfamily protein -0.54 0.32 -0.3
105 AT5G28030 L-cysteine desulfhydrase 1 L-cysteine desulfhydrase 1 -0.54 0.29 -0.3
106 AT3G53720 cation/H+ exchanger 20 cation/H+ exchanger 20, cation/H+
exchanger 20		 -0.53 0.33 -0.32
107 AT1G50290 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.53 0.32 -0.32
108 ATCG01070 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NDHE -0.53 0.31 -0.33
109 AT5G10490 MSCS-like 2 MSCS-like 2 -0.53 0.32 -0.31
110 AT1G20390 transposable element gene -0.52 0.32 -0.3
111 AT4G35240 Protein of unknown function (DUF630 and DUF632) -0.52 0.31 -0.33
112 AT5G13300 ARF GTPase-activating protein ARF-GAP DOMAIN3, SCARFACE, ASCULAR
NETWORK DEFECTIVE 3		 -0.52 0.31 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
113 C0178 MST_2446.7 - - - -0.8 0.45 -0.45
114 C0074 Cystine L-Cystine L-Cystine protein precursor -0.74 0.43 -0.43 C0074
115 C0174 MST_2370.2 - - - -0.7 0.42 -0.45
116 C0233 Sinapinic acid - cis-Sinapinate; Sinapate ferulate and sinapate biosynthesis,
sinapate ester biosynthesis,
free phenylpropanoid acid biosynthesis 		-0.7 0.47 -0.43 C0233
117 C0244 Sucrose D-Sucrose Sucrose stachyose biosynthesis,
fructan degradation,
stachyose degradation,
galactose degradation III,
superpathway of sucrose and starch metabolism II (photosynthetic tissue),
sucrose degradation III,
UDP-glucose biosynthesis (from sucrose),
ajugose biosynthesis II (galactinol-independent),
sucrose biosynthesis I 		0.66 0.32 -0.32 C0244
118 C0240 Stigmasterol - Stigmasterol plant sterol biosynthesis -0.63 0.44 -0.46 C0240
119 C0034 4-Methylthio-n-butylglucosinolate - 4-Methylthiobutyl glucosinolate glucosinolate biosynthesis from dihomomethionine 0.61 0.33 -0.33 C0034