AT3G19170 : presequence protease 1
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AGICode AT3G19170
Description presequence protease 1
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G19170 presequence protease 1 presequence protease 1, ATZNMP,
presequence protease 1
1 0.31 -0.32
2 AT5G48800 Phototropic-responsive NPH3 family protein -0.84 0.32 -0.34
3 AT5G65620 Zincin-like metalloproteases family protein 0.83 0.33 -0.31
4 AT1G03820 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; Has 1345 Blast hits to
1122 proteins in 102 species: Archae - 2; Bacteria - 28;
Metazoa - 28; Fungi - 30; Plants - 109; Viruses - 0; Other
Eukaryotes - 1148 (source: NCBI BLink).
-0.8 0.31 -0.3
5 AT5G13030 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0061
(InterPro:IPR003846); Has 5046 Blast hits to 4997 proteins
in 1211 species: Archae - 8; Bacteria - 2327; Metazoa -
120; Fungi - 134; Plants - 48; Viruses - 0; Other
Eukaryotes - 2409 (source: NCBI BLink).
0.8 0.31 -0.3
6 AT5G35980 yeast YAK1-related gene 1 yeast YAK1-related gene 1 0.79 0.32 -0.31
7 AT5G42390 Insulinase (Peptidase family M16) family protein stromal processing peptidase 0.77 0.33 -0.33
8 AT4G13250 NAD(P)-binding Rossmann-fold superfamily protein NON-YELLOW COLORING 1 0.77 0.32 -0.36
9 AT1G54130 RELA/SPOT homolog 3 AT-RSH3, RELA/SPOT HOMOLOG 3,
RELA/SPOT homolog 3
0.77 0.31 -0.33
10 AT3G27400 Pectin lyase-like superfamily protein -0.76 0.3 -0.31
11 AT2G39700 expansin A4 ATEXP4, expansin A4, ATHEXP ALPHA
1.6, expansin A4
-0.76 0.32 -0.31
12 AT2G26920 Ubiquitin-associated/translation elongation factor EF1B
protein
0.76 0.29 -0.28
13 AT1G20630 catalase 1 catalase 1 0.76 0.33 -0.32
14 AT4G31410 Protein of unknown function (DUF1644) 0.76 0.3 -0.3
15 AT4G21105 cytochrome-c oxidases;electron carriers 0.75 0.31 -0.31
16 AT4G33090 aminopeptidase M1 aminopeptidase M1, AMINOPEPTIDASE
M1
0.75 0.3 -0.3
17 AT4G17340 tonoplast intrinsic protein 2;2 DELTA-TIP2, tonoplast intrinsic
protein 2;2
-0.75 0.33 -0.3
18 AT3G12400 Ubiquitin-conjugating enzyme/RWD-like protein ATELC, ELC 0.75 0.3 -0.31
19 AT4G32640 Sec23/Sec24 protein transport family protein 0.75 0.33 -0.33
20 AT1G79600 Protein kinase superfamily protein 0.75 0.3 -0.3
21 AT1G54710 homolog of yeast autophagy 18 (ATG18) H homolog of yeast autophagy 18
(ATG18) H, homolog of yeast
autophagy 18 (ATG18) H
0.74 0.31 -0.3
22 AT2G17040 NAC domain containing protein 36 NAC domain containing protein 36,
NAC domain containing protein 36
-0.74 0.32 -0.31
23 AT1G32490 RNA helicase family protein EMBRYO DEFECTIVE 2733, ENHANCED
SILENCING PHENOTYPE 3
0.74 0.31 -0.31
24 AT1G02890 AAA-type ATPase family protein 0.74 0.32 -0.32
25 AT3G49750 receptor like protein 44 receptor like protein 44, receptor
like protein 44
-0.74 0.31 -0.32
26 AT4G26510 uridine kinase-like 4 uridine kinase-like 4 0.73 0.32 -0.33
27 AT4G30790 INVOLVED IN: autophagy; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Autophagy-related protein 17
(InterPro:IPR007240), Autophagy-related protein 11
(InterPro:IPR019460); Has 8793 Blast hits to 6268 proteins
in 570 species: Archae - 89; Bacteria - 657; Metazoa -
4844; Fungi - 808; Plants - 441; Viruses - 15; Other
Eukaryotes - 1939 (source: NCBI BLink).
0.73 0.3 -0.29
28 AT5G65720 nitrogen fixation S (NIFS)-like 1 ARABIDOPSIS THALIANA NITROGEN
FIXATION S (NIFS)-LIKE 1, NITROGEN
FIXATION S HOMOLOG 1, nitrogen
fixation S (NIFS)-like 1, NITROGEN
FIXATION S HOMOLOG 1
0.73 0.33 -0.31
29 AT1G24490 OxaA/YidC-like membrane insertion protein ALBINA 4, ARABIDOPSIS THALIANA
ENVELOPE MEMBRANE INTEGRASE
0.73 0.29 -0.31
30 AT5G50920 CLPC homologue 1 ATHSP93-V, CLPC, CLPC homologue 1,
DE-REGULATED CAO ACCUMULATION 1,
HEAT SHOCK PROTEIN 93-V
0.73 0.32 -0.32
31 AT3G16170 AMP-dependent synthetase and ligase family protein acyl activating enzyme 13 0.73 0.29 -0.31
32 AT3G54260 TRICHOME BIREFRINGENCE-LIKE 36 TRICHOME BIREFRINGENCE-LIKE 36 -0.72 0.32 -0.32
33 AT1G15270 Translation machinery associated TMA7 0.72 0.32 -0.32
34 AT1G55325 RNA polymerase II transcription mediators GRAND CENTRAL, MACCHI-BOU 2 0.72 0.3 -0.35
35 AT5G15240 Transmembrane amino acid transporter family protein 0.72 0.29 -0.33
36 AT2G41710 Integrase-type DNA-binding superfamily protein -0.72 0.32 -0.31
37 AT4G13345 Serinc-domain containing serine and sphingolipid
biosynthesis protein
maternal effect embryo arrest 55 0.72 0.33 -0.33
38 AT1G10940 Protein kinase superfamily protein ARABIDOPSIS SERINE/THREONINE
KINASE 1, SUCROSE NONFERMENTING
1-RELATED PROTEIN KINASE 2-4,
SNF1-related protein kinase 2.4,
SRK2A
0.72 0.31 -0.33
39 AT3G21640 FKBP-type peptidyl-prolyl cis-trans isomerase family
protein
ATFKBP42, FK506-BINDING PROTEIN
42, TWISTED DWARF 1, ULTRACURVATA
2
-0.71 0.33 -0.31
40 AT4G14220 RING-H2 group F1A RING-H2 group F1A 0.71 0.32 -0.33
41 AT4G13550 triglyceride lipases;triglyceride lipases 0.71 0.32 -0.32
42 AT1G09130 ATP-dependent caseinolytic (Clp) protease/crotonase family
protein
0.71 0.31 -0.34
43 AT2G32700 LEUNIG_homolog LEUNIG_homolog, MUCILAGE-MODIFIED
1
0.71 0.32 -0.32
44 AT5G06600 ubiquitin-specific protease 12 AtUBP12, ubiquitin-specific
protease 12
0.71 0.3 -0.31
45 AT5G11840 Protein of unknown function (DUF1230) 0.71 0.34 -0.31
46 AT1G28400 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G33850.1); Has 45374 Blast hits to 18870 proteins
in 668 species: Archae - 72; Bacteria - 1460; Metazoa -
1191; Fungi - 1038; Plants - 174; Viruses - 64; Other
Eukaryotes - 41375 (source: NCBI BLink).
-0.71 0.31 -0.32
47 AT5G23110 Zinc finger, C3HC4 type (RING finger) family protein 0.7 0.31 -0.29
48 AT1G07310 Calcium-dependent lipid-binding (CaLB domain) family
protein
0.7 0.33 -0.3
49 AT4G16690 methyl esterase 16 ARABIDOPSIS THALIANA METHYL
ESTERASE 16, methyl esterase 16
0.7 0.31 -0.32
50 AT1G15780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast
hits to 43153 proteins in 1828 species: Archae - 30;
Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants -
7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI
BLink).
0.7 0.3 -0.31
51 AT2G24820 translocon at the inner envelope membrane of chloroplasts
55-II
translocon at the inner envelope
membrane of chloroplasts 55,
translocon at the inner envelope
membrane of chloroplasts 55,
translocon at the inner envelope
membrane of chloroplasts 55-II
0.7 0.33 -0.29
52 AT1G72230 Cupredoxin superfamily protein -0.7 0.3 -0.31
53 AT3G15980 Coatomer, beta' subunit 0.69 0.3 -0.31
54 AT5G05570 transducin family protein / WD-40 repeat family protein 0.69 0.35 -0.31
55 AT2G40280 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein
0.69 0.32 -0.3
56 AT1G71820 SEC6 SEC6 0.69 0.32 -0.35
57 AT5G20030 Plant Tudor-like RNA-binding protein -0.69 0.31 -0.34
58 AT2G47390 Prolyl oligopeptidase family protein 0.69 0.31 -0.31
59 AT1G80690 PPPDE putative thiol peptidase family protein -0.69 0.33 -0.31
60 AT3G07410 RAB GTPase homolog A5B RAB GTPase homolog A5B, RAB GTPase
homolog A5B
-0.69 0.31 -0.32
61 AT1G30510 root FNR 2 root FNR 2, root FNR 2 -0.69 0.33 -0.31
62 AT1G06410 trehalose-phosphatase/synthase 7 trehalose-phosphatase/synthase 7,
ATTPSA, TREHALOSE -6-PHOSPHATASE
SYNTHASE S7,
trehalose-phosphatase/synthase 7
0.69 0.31 -0.31
63 AT1G78900 vacuolar ATP synthase subunit A vacuolar ATP synthase subunit A 0.68 0.31 -0.31
64 AT4G31590 Cellulose-synthase-like C5 CELLULOSE-SYNTHASE LIKE C5,
Cellulose-synthase-like C5,
CELLULOSE-SYNTHASE LIKE C5,
Cellulose-synthase-like C5
0.68 0.34 -0.3
65 AT2G13820 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein
AtXYP2, xylogen protein 2 -0.68 0.33 -0.31
66 AT4G39320 microtubule-associated protein-related -0.68 0.31 -0.33
67 AT4G16845 VEFS-Box of polycomb protein REDUCED VERNALIZATION RESPONSE 2 0.68 0.31 -0.31
68 AT1G07880 Protein kinase superfamily protein ATMPK13 -0.68 0.31 -0.33
69 AT5G41000 YELLOW STRIPE like 4 YELLOW STRIPE like 4 -0.68 0.31 -0.3
70 AT3G02885 GAST1 protein homolog 5 GAST1 protein homolog 5 -0.68 0.32 -0.31
71 AT1G31320 LOB domain-containing protein 4 LOB domain-containing protein 4 -0.68 0.31 -0.34
72 AT4G00450 RNA polymerase II transcription mediators CENTER CITY, CRYPTIC PRECOCIOUS 0.68 0.31 -0.33
73 AT4G17140 pleckstrin homology (PH) domain-containing protein 0.67 0.3 -0.31
74 AT2G44970 alpha/beta-Hydrolases superfamily protein 0.67 0.3 -0.31
75 AT4G39420 unknown protein; Has 46 Blast hits to 40 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).
0.67 0.31 -0.3
76 AT2G32810 beta galactosidase 9 beta galactosidase 9,
beta-galactosidase 9
0.67 0.33 -0.31
77 AT5G58270 ABC transporter of the mitochondrion 3 ATP-binding cassette B25,
ARABIDOPSIS THALIANA ABC
TRANSPORTER OF THE MITOCHONDRION
3, ABC transporter of the
mitochondrion 3, STARIK 1
0.67 0.32 -0.32
78 AT3G11650 NDR1/HIN1-like 2 NDR1/HIN1-like 2 -0.67 0.32 -0.3
79 AT4G32290 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein
-0.67 0.34 -0.31
80 AT5G62330 BEST Arabidopsis thaliana protein match is: Plant
invertase/pectin methylesterase inhibitor superfamily
protein (TAIR:AT5G62340.1); Has 9 Blast hits to 9 proteins
in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
-0.66 0.34 -0.32
81 AT4G03610 Metallo-hydrolase/oxidoreductase superfamily protein -0.66 0.32 -0.31
82 AT1G03210 Phenazine biosynthesis PhzC/PhzF protein -0.66 0.31 -0.35
83 AT4G25940 ENTH/ANTH/VHS superfamily protein -0.66 0.31 -0.3
84 AT3G19540 Protein of unknown function (DUF620) -0.65 0.32 -0.32
85 AT1G60810 ATP-citrate lyase A-2 ATP-citrate lyase A-2 -0.65 0.31 -0.33
86 AT1G03620 ELMO/CED-12 family protein -0.65 0.32 -0.31
87 AT4G02290 glycosyl hydrolase 9B13 glycosyl hydrolase 9B13, glycosyl
hydrolase 9B13
-0.65 0.32 -0.32
88 AT1G19960 BEST Arabidopsis thaliana protein match is: transmembrane
receptors (TAIR:AT2G32140.1); Has 41 Blast hits to 41
proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa -
23; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes -
5 (source: NCBI BLink).
-0.64 0.29 -0.34
89 AT2G38970 Zinc finger (C3HC4-type RING finger) family protein -0.64 0.31 -0.34
90 AT1G70890 MLP-like protein 43 MLP-like protein 43 -0.64 0.33 -0.3
91 AT4G25410 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein
-0.63 0.32 -0.34
92 AT5G62890 Xanthine/uracil permease family protein -0.63 0.31 -0.31
93 AT3G45960 expansin-like A3 expansin-like A3, ATEXPL3, ATHEXP
BETA 2.3, expansin-like A3, EXPL3
-0.63 0.33 -0.32
94 AT3G18710 plant U-box 29 ARABIDOPSIS THALIANA PLANT U-BOX
29, plant U-box 29
-0.63 0.33 -0.34
95 AT1G13470 Protein of unknown function (DUF1262) -0.63 0.32 -0.3
96 AT2G01660 plasmodesmata-located protein 6 plasmodesmata-located protein 6 -0.63 0.32 -0.31
97 AT3G13650 Disease resistance-responsive (dirigent-like protein)
family protein
-0.62 0.32 -0.31
98 AT1G61840 Cysteine/Histidine-rich C1 domain family protein -0.62 0.31 -0.32
99 AT2G42100 Actin-like ATPase superfamily protein -0.62 0.34 -0.31
100 AT5G67270 end binding protein 1C MICROTUBULE END BINDING PROTEIN 1,
ATEB1-HOMOLOG1, end binding
protein 1C
-0.62 0.29 -0.33
101 AT1G67750 Pectate lyase family protein -0.62 0.31 -0.31
102 AT5G03970 F-box associated ubiquitination effector family protein -0.61 0.32 -0.32
103 AT2G33790 arabinogalactan protein 30 arabinogalactan protein 30,
ATAGP30
-0.61 0.3 -0.34
104 AT2G33990 IQ-domain 9 IQ-domain 9 -0.61 0.31 -0.32
105 AT4G37770 1-amino-cyclopropane-1-carboxylate synthase 8 1-amino-cyclopropane-1-carboxylate
synthase 8
-0.61 0.32 -0.31
106 AT4G22140 PHD finger family protein / bromo-adjacent homology (BAH)
domain-containing protein
EARLY BOLTING IN SHORT DAYS -0.61 0.33 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
107 C0074 Cystine L-Cystine L-Cystine protein precursor 0.71 0.45 -0.43 C0074