AT1G47940 : -
Query Information
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AGICode AT1G47940
Description Pentatricopeptide repeat (PPR) superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G47940 Pentatricopeptide repeat (PPR) superfamily protein 1 0.3 -0.3
2 AT5G55370 MBOAT (membrane bound O-acyl transferase) family protein 0.68 0.32 -0.31
3 AT3G24780 Uncharacterised conserved protein UCP015417, vWA 0.68 0.33 -0.33
4 AT1G49150 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.68 0.32 -0.32
5 AT1G03250 unknown protein; Has 89 Blast hits to 89 proteins in 31
species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 10 (source:
NCBI BLink).		 -0.67 0.32 -0.32
6 AT4G03690 transposable element gene 0.67 0.31 -0.3
7 AT1G21290 transposable element gene 0.66 0.31 -0.29
8 AT2G03320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.64 0.32 -0.28
9 AT4G32560 paramyosin-related -0.63 0.3 -0.29
10 AT2G41550 Rho termination factor 0.63 0.32 -0.31
11 AT5G50390 Pentatricopeptide repeat (PPR-like) superfamily protein EMBRYO DEFECTIVE 3141 0.63 0.33 -0.34
12 AT3G30660 transposable element gene 0.63 0.31 -0.31
13 AT2G16260 pseudogene of glycine-rich RNA-binding protein glycine-rich RNA-binding protein 1 0.62 0.33 -0.31
14 AT5G05130 DNA/RNA helicase protein 0.62 0.32 -0.32
15 AT3G05780 lon protease 3 lon protease 3 0.61 0.32 -0.33
16 AT3G29075 glycine-rich protein -0.61 0.32 -0.31
17 AT3G19070 Homeodomain-like superfamily protein 0.61 0.3 -0.31
18 AT4G01500 AP2/B3-like transcriptional factor family protein NGATHA4 0.6 0.32 -0.32
19 AT3G22940 F-box associated ubiquitination effector family protein -0.6 0.33 -0.31
20 AT4G24490 RAB geranylgeranyl transferase alpha subunit 1 RAB geranylgeranyl transferase
alpha subunit 1, RAB
geranylgeranyl transferase alpha
subunit 1		 0.59 0.32 -0.3
21 AT1G69120 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 7, APETALA1 0.59 0.33 -0.31
22 AT5G63135 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.59 0.32 -0.3
23 AT1G25240 ENTH/VHS/GAT family protein -0.58 0.32 -0.33
24 AT1G80970 XH domain-containing protein -0.58 0.32 -0.33
25 AT5G09830 BolA-like family protein -0.57 0.32 -0.32
26 AT1G06260 Cysteine proteinases superfamily protein 0.57 0.31 -0.34
27 AT3G10950 Zinc-binding ribosomal protein family protein 0.57 0.33 -0.3
28 AT2G07455 transposable element gene -0.57 0.31 -0.32
29 AT3G47050 Glycosyl hydrolase family protein -0.57 0.3 -0.34
30 AT1G19200 Protein of unknown function (DUF581) -0.56 0.32 -0.3
31 AT1G33220 Glycosyl hydrolase superfamily protein -0.56 0.31 -0.34
32 AT3G29420 geranylgeranyl pyrophosphate synthase-related / GGPP
synthetase-related / farnesyltranstransferase-related		 0.56 0.34 -0.3
33 AT5G09500 Ribosomal protein S19 family protein 0.56 0.32 -0.33
34 AT1G61070 low-molecular-weight cysteine-rich 66 low-molecular-weight cysteine-rich
66, PLANT DEFENSIN 2.4		 -0.56 0.29 -0.35
35 AT4G16820 alpha/beta-Hydrolases superfamily protein phospholipase A I beta 2 -0.55 0.34 -0.31
36 AT4G03950 Nucleotide/sugar transporter family protein 0.55 0.3 -0.32
37 AT5G40930 translocase of outer membrane 20-4 translocase of outer membrane 20-4 -0.55 0.31 -0.32
38 AT4G15460 glycine-rich protein 0.55 0.33 -0.32
39 AT2G41570 transposable element gene -0.55 0.31 -0.32
40 AT5G45690 Protein of unknown function (DUF1264) -0.54 0.32 -0.33
41 AT1G22080 Cysteine proteinases superfamily protein -0.54 0.33 -0.32
42 AT1G05900 endonuclease III 2 ATNTH2, endonuclease III 2 -0.54 0.33 -0.32
43 AT1G73290 serine carboxypeptidase-like 5 serine carboxypeptidase-like 5 -0.54 0.33 -0.32
44 AT3G47590 alpha/beta-Hydrolases superfamily protein -0.53 0.32 -0.32
45 AT1G63600 Receptor-like protein kinase-related family protein -0.53 0.31 -0.33
46 AT1G02490 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 -0.52 0.31 -0.32
47 AT1G05450 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.51 0.3 -0.33
48 AT5G25380 cyclin a2;1 cyclin a2;1 -0.51 0.34 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
49 C0262 UDP-glucuronic acid - UDP-D-glucuronate xylan biosynthesis,
UDP-D-glucuronate biosynthesis (from myo-inositol),
UDP-D-galacturonate biosynthesis I (from UDP-D-glucuronate),
UDP-D-apiose biosynthesis (from UDP-D-glucuronate),
galactose degradation III,
UDP-D-xylose and UDP-D-glucuronate biosynthesis 		-0.67 0.44 -0.43 C0262
50 C0091 Fructose-1,6-bisphosphate D-Fructose-1,6-bisphosphate Fructose-1,6-bisphosphate gluconeogenesis I,
Calvin-Benson-Bassham cycle,
glycolysis IV (plant cytosol),
glycolysis I,
CA1P biosynthesis,
sucrose biosynthesis I 		-0.66 0.43 -0.47 C0091
51 C0075 dGDP - dGDP purine nucleotide metabolism (phosphotransfer and nucleotide modification) -0.62 0.42 -0.48 C0075
52 C0186 NAD - NAD+ ammonia assimilation cycle II,
aspartate degradation II,
adenosine nucleotides degradation I,
plant sterol biosynthesis II,
UDP-D-xylose and UDP-D-glucuronate biosynthesis,
NAD biosynthesis I (from aspartate),
ethanol degradation IV (peroxisomal),
abscisic acid biosynthesis,
palmitate biosynthesis II (bacteria and plants),
zeaxanthin biosynthesis,
sucrose degradation to ethanol and lactate (anaerobic),
glutamate degradation IV,
stearate biosynthesis II (plants),
guanosine nucleotides degradation II,
glutamate degradation I,
mannitol degradation II,
glycerol-3-phosphate shuttle,
2-ketoglutarate dehydrogenase complex,
arginine degradation I (arginase pathway),
aerobic respiration (alternative oxidase pathway),
branched-chain alpha-keto acid dehydrogenase complex,
4-aminobutyrate degradation IV,
glycolysis I,
glycine cleavage complex,
lysine degradation II,
fatty acid beta-oxidation II (core pathway),
nitrate reduction II (assimilatory),
TCA cycle variation V (plant),
leucine degradation I,
thiamine biosynthesis II,
acetaldehyde biosynthesis I,
sorbitol degradation I,
glutamine biosynthesis III,
aerobic respiration (cytochrome c),
ethanol degradation I,
ascorbate biosynthesis I (L-galactose pathway),
glycolysis IV (plant cytosol),
benzoate biosynthesis II (CoA-independent, non-beta-oxidative),
siroheme biosynthesis,
TCA cycle variation III (eukaryotic),
isoleucine degradation I,
pyridine nucleotide cycling (plants),
tyrosine biosynthesis I,
gluconeogenesis I,
glycine betaine biosynthesis III (plants),
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis,
NAD/NADH phosphorylation and dephosphorylation,
guanosine nucleotides degradation I,
purine nucleotides de novo biosynthesis II,
acetyl-CoA biosynthesis (from pyruvate),
serine biosynthesis,
photorespiration,
histidine biosynthesis,
glyoxylate cycle,
jasmonic acid biosynthesis,
alanine degradation II (to D-lactate),
a ubiquinone + NADH + H+ -> a ubiquinol + NAD+,
putrescine degradation IV,
brassinosteroid biosynthesis III,
fatty acid elongation -- saturated,
pyruvate fermentation to ethanol II,
beta-alanine biosynthesis II,
4-hydroxybenzoate biosynthesis V,
plant sterol biosynthesis,
urate biosynthesis/inosine 5'-phosphate degradation,
phenylalanine degradation III,
glutamate biosynthesis IV,
leucine biosynthesis,
fatty acid alpha-oxidation,
a ubiquinone + NADH + H+ -> NAD+ + a ubiquinol,
Fe(III)-reduction and Fe(II) transport,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
phenylethanol biosynthesis,
pyruvate fermentation to lactate,
superpathway of glyoxylate cycle and fatty acid degradation,
fatty acid omega-oxidation,
galactose degradation III,
ethanol degradation II (cytosol),
sucrose biosynthesis I,
valine degradation I,
folate transformations II 		-0.59 0.46 -0.44 C0186
53 C0147 Mannose D-Mannose D-Mannose mannose degradation,
mannitol degradation II 		-0.53 0.35 -0.3 C0147