AT3G09490 : -
Query Information
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AGICode AT3G09490
Description Tetratricopeptide repeat (TPR)-like superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G09490 Tetratricopeptide repeat (TPR)-like superfamily protein 1 0.31 -0.31
2 AT2G17720 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 prolyl 4-hydroxylase 5 0.84 0.34 -0.3
3 AT4G21850 methionine sulfoxide reductase B9 methionine sulfoxide reductase B9,
methionine sulfoxide reductase B9		 0.78 0.3 -0.3
4 AT3G09940 monodehydroascorbate reductase ARABIDOPSIS THALIANA
MONODEHYDROASCORBATE REDUCTASE 3,
MONODEHYDROASCORBATE REDUCTASE 2,
MONODEHYDROASCORBATE REDUCTASE 3,
monodehydroascorbate reductase		 0.78 0.3 -0.34
5 AT3G06300 P4H isoform 2 P4H isoform 2, prolyl
4-hydroxylase 2		 0.78 0.32 -0.31
6 AT4G34200 D-3-phosphoglycerate dehydrogenase embryo sac development arrest 9 0.76 0.32 -0.32
7 AT3G11340 UDP-Glycosyltransferase superfamily protein UDP-dependent glycosyltransferase
76B1		 0.76 0.31 -0.32
8 AT2G01930 basic pentacysteine1 BASIC PENTACYSTEINE1, BBR, basic
pentacysteine1		 -0.75 0.31 -0.29
9 AT4G35180 LYS/HIS transporter 7 LYS/HIS transporter 7 0.75 0.3 -0.32
10 AT3G54960 PDI-like 1-3 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 1, PDI-like
1-3, PROTEIN DISULFIDE ISOMERASE
1, PDI-like 1-3		 0.74 0.32 -0.31
11 AT1G19360 Nucleotide-diphospho-sugar transferase family protein reduced residual arabinose 3 0.74 0.31 -0.33
12 AT5G20400 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.74 0.32 -0.34
13 AT3G27890 NADPH:quinone oxidoreductase NADPH:quinone oxidoreductase 0.74 0.32 -0.29
14 AT2G23620 methyl esterase 1 ARABIDOPSIS THALIANA METHYL
ESTERASE 1, methyl esterase 1		 0.73 0.32 -0.33
15 AT3G49620 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 DARK INDUCIBLE 11 0.73 0.31 -0.29
16 AT5G13420 Aldolase-type TIM barrel family protein 0.73 0.3 -0.31
17 AT1G80360 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 0.73 0.31 -0.31
18 AT4G25900 Galactose mutarotase-like superfamily protein 0.72 0.29 -0.34
19 AT3G13790 Glycosyl hydrolases family 32 protein ATBFRUCT1, ARABIDOPSIS THALIANA
CELL WALL INVERTASE 1		 0.72 0.34 -0.3
20 AT5G43170 zinc-finger protein 3 zinc-finger protein 3, zinc-finger
protein 3		 0.72 0.32 -0.3
21 AT5G17300 Homeodomain-like superfamily protein REVEILLE 1 -0.72 0.3 -0.32
22 AT3G14980 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger protein		 -0.72 0.33 -0.31
23 AT2G41540 6-phosphogluconate dehydrogenase family protein GPDHC1 -0.72 0.29 -0.3
24 AT5G36880 acetyl-CoA synthetase acetyl-CoA synthetase 0.72 0.31 -0.28
25 AT2G19570 cytidine deaminase 1 AT-CDA1, cytidine deaminase 1,
DESZ		 0.71 0.31 -0.3
26 AT5G45510 Leucine-rich repeat (LRR) family protein 0.71 0.32 -0.32
27 AT3G45900 Ribonuclease P protein subunit P38-related -0.7 0.31 -0.34
28 AT1G62790 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.7 0.33 -0.29
29 ATCG00710 photosystem II reaction center protein H photosystem II reaction center
protein H		 -0.69 0.35 -0.31
30 AT3G13610 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.69 0.33 -0.31
31 AT3G01290 SPFH/Band 7/PHB domain-containing membrane-associated
protein family		 AtHIR2, hypersensitive induced
reaction 2		 0.69 0.33 -0.3
32 ATCG00340 Photosystem I, PsaA/PsaB protein PSAB -0.69 0.32 -0.33
33 AT2G15390 fucosyltransferase 4 atfut4, fucosyltransferase 4 0.69 0.31 -0.31
34 AT2G43535 Scorpion toxin-like knottin superfamily protein 0.69 0.32 -0.31
35 AT2G25170 chromatin remodeling factor CHD3 (PICKLE) CHD3, CHR6,
CYTOKININ-HYPERSENSITIVE 2,
GYMNOS, PICKLE, SUPPRESSOR OF SLR
2		 -0.68 0.3 -0.31
36 ATCG01100 NADH dehydrogenase family protein NDHA -0.68 0.31 -0.3
37 AT3G52920 Family of unknown function (DUF662) -0.68 0.34 -0.29
38 AT2G18890 Protein kinase superfamily protein -0.68 0.3 -0.33
39 AT1G21370 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF218 (InterPro:IPR003848); Has 160 Blast
hits to 160 proteins in 86 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 102; Plants - 44; Viruses - 0;
Other Eukaryotes - 14 (source: NCBI BLink).		 0.68 0.32 -0.3
40 AT5G46230 Protein of unknown function, DUF538 0.68 0.32 -0.31
41 AT5G17060 ADP-ribosylation factor B1B ADP-ribosylation factor B1B,
ADP-ribosylation factor B1B		 0.68 0.33 -0.32
42 AT1G15340 methyl-CPG-binding domain 10 methyl-CPG-binding domain 10 -0.68 0.32 -0.3
43 AT2G05790 O-Glycosyl hydrolases family 17 protein -0.68 0.32 -0.31
44 AT3G30300 O-fucosyltransferase family protein -0.67 0.32 -0.32
45 AT5G20270 heptahelical transmembrane protein1 heptahelical transmembrane
protein1		 -0.67 0.3 -0.29
46 AT3G29250 NAD(P)-binding Rossmann-fold superfamily protein AtSDR4, short-chain dehydrogenase
reductase 4		 0.67 0.31 -0.35
47 ATCG00360 Tetratricopeptide repeat (TPR)-like superfamily protein YCF3 -0.67 0.32 -0.33
48 ATCG00160 ribosomal protein S2 ribosomal protein S2 -0.67 0.33 -0.31
49 AT1G65610 Six-hairpin glycosidases superfamily protein ARABIDOPSIS THALIANA GLYCOSYL
HYDROLASE 9A2, KORRIGAN 2		 0.67 0.32 -0.31
50 ATCG01120 chloroplast ribosomal protein S15 chloroplast ribosomal protein S15 -0.67 0.31 -0.32
51 AT1G74210 PLC-like phosphodiesterases superfamily protein AtGDPD5, glycerophosphodiester
phosphodiesterase 5		 0.67 0.33 -0.29
52 AT1G51800 Leucine-rich repeat protein kinase family protein IMPAIRED OOMYCETE SUSCEPTIBILITY 1 0.67 0.32 -0.3
53 AT3G28930 AIG2-like (avirulence induced gene) family protein AVRRPT2-INDUCED GENE 2 0.67 0.3 -0.33
54 AT1G49890 Family of unknown function (DUF566) QWRF domain containing 2 -0.67 0.31 -0.31
55 AT5G01500 thylakoid ATP/ADP carrier thylakoid ATP/ADP carrier 0.66 0.31 -0.32
56 ATCG00720 photosynthetic electron transfer B photosynthetic electron transfer B -0.66 0.3 -0.3
57 AT1G06690 NAD(P)-linked oxidoreductase superfamily protein -0.66 0.31 -0.3
58 AT3G26210 cytochrome P450, family 71, subfamily B, polypeptide 23 cytochrome P450, family 71,
subfamily B, polypeptide 23		 0.66 0.3 -0.33
59 AT4G18430 RAB GTPase homolog A1E RAB GTPase homolog A1E, RAB GTPase
homolog A1E		 0.66 0.29 -0.33
60 AT3G53540 unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN:
24 plant structures; EXPRESSED DURING: 14 growth stages;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana
protein match is: Protein of unknown function (DUF3741)
(TAIR:AT4G28760.2); Has 1710 Blast hits to 868 proteins in
206 species: Archae - 2; Bacteria - 409; Metazoa - 304;
Fungi - 204; Plants - 304; Viruses - 2; Other Eukaryotes -
485 (source: NCBI BLink).		 -0.66 0.32 -0.33
61 AT4G39030 MATE efflux family protein ENHANCED DISEASE SUSCEPTIBILITY 5,
susceptible to
coronatine-deficient Pst DC3000 3,
SALICYLIC ACID INDUCTION DEFICIENT
1		 0.66 0.32 -0.32
62 AT3G04720 pathogenesis-related 4 HEVEIN-LIKE, PR-4,
pathogenesis-related 4		 0.66 0.32 -0.32
63 ATCG00790 ribosomal protein L16 ribosomal protein L16 -0.66 0.31 -0.31
64 AT5G01510 Protein of unknown function, DUF647 ROOT UV-B SENSITIVE 5 -0.66 0.32 -0.32
65 AT4G32650 potassium channel in Arabidopsis thaliana 3 ARABIDOPSIS THALIANA K+ RECTIFYING
CHANNEL 1, A. thaliana
low-K+-tolerant 1, potassium
channel in Arabidopsis thaliana 3,
KC1		 0.66 0.31 -0.29
66 AT2G35610 xyloglucanase 113 xyloglucanase 113 0.66 0.32 -0.3
67 AT1G43910 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.66 0.31 -0.32
68 AT2G27110 FAR1-related sequence 3 FAR1-related sequence 3 -0.66 0.32 -0.31
69 AT3G52710 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 19 plant structures; EXPRESSED
DURING: 9 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G36220.1); Has 64 Blast
hits to 64 proteins in 10 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.65 0.33 -0.29
70 ATCG00180 DNA-directed RNA polymerase family protein RPOC1 -0.65 0.31 -0.31
71 AT1G51890 Leucine-rich repeat protein kinase family protein 0.65 0.31 -0.33
72 AT1G01900 subtilase family protein ATSBT1.1, SBTI1.1 -0.65 0.32 -0.3
73 AT4G12550 Auxin-Induced in Root cultures 1 Auxin-Induced in Root cultures 1 0.65 0.32 -0.31
74 AT1G15040 Class I glutamine amidotransferase-like superfamily protein 0.65 0.32 -0.31
75 AT1G67330 Protein of unknown function (DUF579) 0.65 0.3 -0.32
76 AT4G34680 GATA transcription factor 3 GATA transcription factor 3 -0.65 0.33 -0.33
77 ATCG01090 NADPH dehydrogenases NDHI -0.65 0.32 -0.3
78 AT1G63420 Arabidopsis thaliana protein of unknown function (DUF821) -0.64 0.32 -0.31
79 AT1G12820 auxin signaling F-box 3 auxin signaling F-box 3 -0.64 0.32 -0.32
80 AT5G04310 Pectin lyase-like superfamily protein 0.64 0.32 -0.31
81 AT1G21890 nodulin MtN21 /EamA-like transporter family protein -0.64 0.34 -0.33
82 AT5G47040 lon protease 2 lon protease 2 -0.64 0.31 -0.31
83 AT5G26110 Protein kinase superfamily protein 0.64 0.31 -0.32
84 ATCG01110 NAD(P)H dehydrogenase subunit H NAD(P)H dehydrogenase subunit H -0.64 0.34 -0.33
85 AT2G26020 plant defensin 1.2b plant defensin 1.2b 0.64 0.32 -0.3
86 AT3G46280 protein kinase-related 0.64 0.33 -0.31
87 AT4G18600 SCAR family protein WASP (WISKOTT-ALDRICH SYNDROME
PROTEIN)-FAMILY VERPROLIN
HOMOLOGOUS PROTEIN 5, SCARL, WAVE5		 -0.64 0.33 -0.31
88 AT4G36670 Major facilitator superfamily protein AtPLT6, AtPMT6, polyol transporter
6, polyol/monosaccharide
transporter 6		 0.64 0.32 -0.31
89 AT5G26790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G06475.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.64 0.32 -0.33
90 AT2G38860 Class I glutamine amidotransferase-like superfamily protein YLS5 0.64 0.31 -0.33
91 ATCG00420 NADH dehydrogenase subunit J NADH dehydrogenase subunit J -0.64 0.31 -0.3
92 AT5G20990 molybdopterin biosynthesis CNX1 protein / molybdenum
cofactor biosynthesis enzyme CNX1 (CNX1)		 B73, CHLORATE RESISTANT 6,
CO-FACTOR FOR NITRATE REDUCTASE
AND XANTHINE DEHYDROGENASE,
CO-FACTOR FOR NITRATE REDUCTASE
AND XANTHINE DEHYDROGENASE 1,
SIRTINOL 4		 0.64 0.32 -0.31
93 ATCG00270 photosystem II reaction center protein D photosystem II reaction center
protein D		 -0.64 0.31 -0.31
94 AT4G24830 arginosuccinate synthase family 0.64 0.31 -0.3
95 AT5G35970 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.64 0.32 -0.3
96 ATCG00380 chloroplast ribosomal protein S4 chloroplast ribosomal protein S4 -0.64 0.31 -0.31
97 AT1G29700 Metallo-hydrolase/oxidoreductase superfamily protein -0.63 0.32 -0.32
98 AT1G60690 NAD(P)-linked oxidoreductase superfamily protein -0.63 0.31 -0.33
99 AT4G09150 T-complex protein 11 -0.63 0.33 -0.29
100 AT5G44420 plant defensin 1.2 LOW-MOLECULAR-WEIGHT CYSTEINE-RICH
77, plant defensin 1.2, PLANT
DEFENSIN 1.2A		 0.63 0.3 -0.31
101 AT2G28330 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G08035.1); Has 18 Blast hits
to 18 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.63 0.32 -0.31
102 AT5G05460 Glycosyl hydrolase family 85 AtENGase85A,
Endo-beta-N-acetyglucosaminidase
85A		 0.63 0.33 -0.31
103 AT5G42860 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 19 plant structures; EXPRESSED
DURING: 11 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G45688.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.63 0.31 -0.32
104 AT5G20840 Phosphoinositide phosphatase family protein -0.63 0.32 -0.33
105 AT1G66800 NAD(P)-binding Rossmann-fold superfamily protein 0.63 0.31 -0.32
106 AT5G20220 zinc knuckle (CCHC-type) family protein -0.63 0.33 -0.33
107 AT2G39210 Major facilitator superfamily protein 0.63 0.34 -0.33
108 AT5G67030 zeaxanthin epoxidase (ZEP) (ABA1) ABA DEFICIENT 1, ARABIDOPSIS
THALIANA ABA DEFICIENT 1,
ARABIDOPSIS THALIANA ZEAXANTHIN
EPOXIDASE, IMPAIRED IN
BABA-INDUCED STERILITY 3, LOW
EXPRESSION OF OSMOTIC
STRESS-RESPONSIVE GENES 6,
NON-PHOTOCHEMICAL QUENCHING 2,
ZEAXANTHIN EPOXIDASE		 -0.63 0.3 -0.33
109 ATCG00300 YCF9 YCF9 -0.63 0.3 -0.3
110 AT1G05460 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 SILENCING DEFECTIVE -0.62 0.33 -0.32
111 ATCG00700 photosystem II reaction center protein N photosystem II reaction center
protein N		 -0.62 0.31 -0.31
112 AT3G59110 Protein kinase superfamily protein -0.62 0.33 -0.32
113 AT2G16390 SNF2 domain-containing protein / helicase domain-containing
protein		 CHR35, DEFECTIVE IN MERISTEM
SILENCING 1, DEFECTIVE IN
RNA-DIRECTED DNA METHYLATION 1		 -0.62 0.33 -0.32
114 ATCG00520 unfolded protein binding YCF4 -0.62 0.3 -0.32
115 AT4G32551 LisH dimerisation motif;WD40/YVTN repeat-like-containing
domain		 LEUNIG, ROTUNDA 2 -0.62 0.3 -0.32
116 ATCG01050 NADH-Ubiquinone/plastoquinone (complex I) protein NDHD -0.62 0.31 -0.31
117 AT3G47295 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 13 Blast hits to 13
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.62 0.31 -0.3
118 AT3G63300 FORKED 1 FORKED 1 -0.62 0.28 -0.31
119 ATCG00170 DNA-directed RNA polymerase family protein RPOC2 -0.61 0.31 -0.32
120 AT2G28880 para-aminobenzoate (PABA) synthase family protein aminodeoxychorismate synthase,
embryo defective 1997		 -0.61 0.29 -0.32
121 AT5G54740 seed storage albumin 5 seed storage albumin 5 -0.61 0.32 -0.31
122 ATCG00780 ribosomal protein L14 ribosomal protein L14 -0.61 0.31 -0.32
123 ATCG00820 ribosomal protein S19 ribosomal protein S19 -0.61 0.3 -0.32
124 AT4G11640 serine racemase serine racemase, serine racemase -0.61 0.29 -0.32
125 AT5G64080 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 AtXYP1, xylogen protein 1 -0.61 0.31 -0.33
126 ATCG00690 photosystem II reaction center protein T photosystem II reaction center
protein T, PSBTC		 -0.61 0.33 -0.31
127 AT2G45340 Leucine-rich repeat protein kinase family protein -0.61 0.3 -0.34
128 AT5G08430 SWIB/MDM2 domain;Plus-3;GYF -0.6 0.32 -0.31
129 AT1G10640 Pectin lyase-like superfamily protein -0.6 0.32 -0.33
130 AT3G51950 Zinc finger (CCCH-type) family protein / RNA recognition
motif (RRM)-containing protein		 -0.6 0.33 -0.32
131 AT5G59430 telomeric repeat binding protein 1 TELOMERE REPEAT BINDING PROTEIN 1,
telomeric repeat binding protein 1		 -0.6 0.3 -0.3
132 AT1G15080 lipid phosphate phosphatase 2 LIPID PHOSPHATE PHOSPHATASE 2,
PHOSPHATIDIC ACID PHOSPHATASE 2,
lipid phosphate phosphatase 2		 -0.6 0.32 -0.33
133 ATCG00540 photosynthetic electron transfer A photosynthetic electron transfer A -0.6 0.31 -0.3
134 AT5G66940 Dof-type zinc finger DNA-binding family protein -0.6 0.31 -0.31
135 AT2G20210 RNI-like superfamily protein -0.6 0.3 -0.33