AT3G20470 : ATGRP-5
Query Information
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AGICode AT3G20470
Description glycine-rich protein 5
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G20470 glycine-rich protein 5 ATGRP-5, ATGRP5, GLYCINE-RICH
PROTEIN 5, glycine-rich protein 5		 1 0.31 -0.3
2 AT2G21080 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
vacuole; EXPRESSED IN: 15 plant structures; EXPRESSED
DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3537 (InterPro:IPR021924);
BEST Arabidopsis thaliana protein match is: Protein of
unknown function (DUF3537) (TAIR:AT3G20300.1); Has 141
Blast hits to 141 proteins in 16 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 140; Viruses
- 0; Other Eukaryotes - 1 (source: NCBI BLink).		 -0.76 0.31 -0.3
3 AT5G59320 lipid transfer protein 3 lipid transfer protein 3 0.72 0.3 -0.32
4 AT5G57800 Fatty acid hydroxylase superfamily ECERIFERUM 3, FACELESS POLLEN 1,
WAX2, YRE		 0.69 0.32 -0.32
5 AT3G56760 Protein kinase superfamily protein -0.69 0.3 -0.31
6 AT2G43570 chitinase, putative chitinase, putative 0.68 0.32 -0.32
7 AT2G45380 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: inflorescence meristem, flower,
cultured cell; EXPRESSED DURING: petal differentiation and
expansion stage; BEST Arabidopsis thaliana protein match
is: Calcium-binding EF-hand family protein
(TAIR:AT4G34070.1); Has 171 Blast hits to 170 proteins in
31 species: Archae - 2; Bacteria - 0; Metazoa - 68; Fungi -
0; Plants - 94; Viruses - 0; Other Eukaryotes - 7 (source:
NCBI BLink).		 -0.68 0.32 -0.32
8 AT3G59630 diphthamide synthesis DPH2 family protein -0.68 0.31 -0.3
9 AT1G63200 Cystatin/monellin superfamily protein -0.67 0.31 -0.3
10 AT5G04200 metacaspase 9 metacaspase 9, metacaspase 2f,
metacaspase 9, metacaspase 2f		 0.67 0.31 -0.32
11 AT1G70500 Pectin lyase-like superfamily protein 0.67 0.33 -0.3
12 AT4G39350 cellulose synthase A2 ATCESA2, ATH-A, cellulose synthase
A2		 -0.67 0.32 -0.31
13 AT2G16630 Pollen Ole e 1 allergen and extensin family protein 0.67 0.34 -0.32
14 AT4G21620 glycine-rich protein 0.66 0.33 -0.3
15 AT4G39740 Thioredoxin superfamily protein homologue of copper chaperone SCO1
2		 -0.65 0.33 -0.3
16 AT1G11190 bifunctional nuclease i bifunctional nuclease i,
ENDONUCLEASE 1		 0.65 0.32 -0.3
17 AT1G01030 AP2/B3-like transcriptional factor family protein NGATHA3 -0.65 0.31 -0.3
18 AT3G45670 Protein kinase superfamily protein -0.65 0.32 -0.31
19 AT4G16240 unknown protein; Has 17010 Blast hits to 4557 proteins in
509 species: Archae - 32; Bacteria - 2889; Metazoa - 6537;
Fungi - 648; Plants - 4769; Viruses - 447; Other Eukaryotes
- 1688 (source: NCBI BLink).		 0.65 0.31 -0.32
20 AT1G23420 Plant-specific transcription factor YABBY family protein INNER NO OUTER -0.65 0.31 -0.32
21 AT1G26820 ribonuclease 3 ribonuclease 3 0.64 0.31 -0.31
22 AT1G10910 Pentatricopeptide repeat (PPR) superfamily protein EMBRYO DEFECTIVE 3103 -0.64 0.31 -0.33
23 AT3G02280 Flavodoxin family protein -0.64 0.33 -0.31
24 AT5G50260 Cysteine proteinases superfamily protein cysteine endopeptidase 1 0.64 0.33 -0.31
25 AT1G42365 transposable element gene -0.63 0.33 -0.31
26 AT5G54790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G50930.1); Has 53 Blast hits
to 53 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.63 0.3 -0.33
27 AT5G11890 FUNCTIONS IN: molecular_function unknown; LOCATED IN:
plasma membrane; EXPRESSED IN: 12 plant structures;
EXPRESSED DURING: 6 growth stages; BEST Arabidopsis
thaliana protein match is: Late embryogenesis abundant
(LEA) hydroxyproline-rich glycoprotein family
(TAIR:AT1G17620.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 EMBRYO DEFECTIVE 3135 -0.63 0.33 -0.32
28 AT5G58450 Tetratricopeptide repeat (TPR)-like superfamily protein -0.63 0.31 -0.3
29 AT4G19810 Glycosyl hydrolase family protein with chitinase insertion
domain		 class V chitinase 0.63 0.31 -0.33
30 AT1G11870 Seryl-tRNA synthetase ATSRS, ovule abortion 7,
Seryl-tRNA synthetase		 -0.62 0.32 -0.32
31 AT5G22460 alpha/beta-Hydrolases superfamily protein 0.62 0.32 -0.32
32 AT1G09020 homolog of yeast sucrose nonfermenting 4 ATSNF4, homolog of yeast sucrose
nonfermenting 4		 -0.62 0.32 -0.31
33 AT5G04000 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.62 0.32 -0.3
34 AT2G25870 haloacid dehalogenase-like hydrolase family protein -0.62 0.32 -0.31
35 AT5G24230 Lipase class 3-related protein -0.62 0.31 -0.3
36 AT3G59410 protein kinase family protein ARABIDOPSIS THALIANA GENERAL
CONTROL NON-REPRESSIBLE 2, GENERAL
CONTROL NON-REPRESSIBLE 2		 -0.62 0.32 -0.31
37 AT5G13600 Phototropic-responsive NPH3 family protein -0.62 0.31 -0.3
38 AT2G35390 Phosphoribosyltransferase family protein -0.62 0.32 -0.32
39 AT1G22890 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 11 growth stages; Has 17 Blast hits to 17
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.61 0.3 -0.31
40 AT1G74040 2-isopropylmalate synthase 1 2-isopropylmalate synthase 1,
SOPROPYLMALATE SYNTHASE 2, MAML-3		 -0.61 0.35 -0.31
41 AT5G32470 Haem oxygenase-like, multi-helical -0.61 0.32 -0.33
42 AT5G18690 arabinogalactan protein 25 arabinogalactan protein 25,
ARABIDOPSIS THALIANA
ARABINOGALACTAN PROTEINS 25		 0.61 0.3 -0.3
43 AT3G16380 poly(A) binding protein 6 poly(A) binding protein 6 -0.61 0.33 -0.3
44 AT2G04730 pseudogene, F-box protein-related, contains TIGRFAM
TIGR01640 : F-box protein interaction domain; similar to
F-box protein family, AtFBX9 (GI:20197985) (Arabidopsis
thaliana)		 -0.61 0.33 -0.32
45 AT3G22590 PLANT HOMOLOGOUS TO PARAFIBROMIN CDC73, PLANT HOMOLOGOUS TO
PARAFIBROMIN		 -0.61 0.32 -0.31
46 AT3G01590 Galactose mutarotase-like superfamily protein 0.61 0.34 -0.3
47 AT1G78780 pathogenesis-related family protein 0.6 0.31 -0.31
48 AT5G41180 leucine-rich repeat transmembrane protein kinase family
protein		 -0.6 0.32 -0.33
49 AT2G19800 myo-inositol oxygenase 2 myo-inositol oxygenase 2 0.6 0.32 -0.31
50 AT2G15230 lipase 1 lipase 1, lipase 1 0.6 0.32 -0.31
51 AT4G19610 nucleotide binding;nucleic acid binding;RNA binding -0.6 0.34 -0.31
52 AT1G48520 GLU-ADT subunit B GLU-ADT subunit B -0.6 0.32 -0.31
53 AT2G46920 Protein phosphatase 2C family protein poltergeist 0.6 0.32 -0.33
54 AT4G33530 K+ uptake permease 5 K+ uptake permease 5 -0.6 0.29 -0.34
55 AT4G38740 rotamase CYP 1 rotamase CYP 1 0.6 0.3 -0.32
56 AT3G25900 Homocysteine S-methyltransferase family protein ATHMT-1, HMT-1 0.6 0.31 -0.31
57 AT1G06470 Nucleotide/sugar transporter family protein -0.6 0.31 -0.31
58 AT4G37380 Tetratricopeptide repeat (TPR)-like superfamily protein -0.6 0.34 -0.3
59 AT2G15260 RING/U-box superfamily protein -0.6 0.28 -0.31
60 AT4G36160 NAC domain containing protein 76 NAC domain containing protein 76,
NAC domain containing protein 76,
VASCULAR-RELATED NAC-DOMAIN 2		 0.6 0.32 -0.33
61 AT3G27740 carbamoyl phosphate synthetase A carbamoyl phosphate synthetase A,
VENOSA 6		 -0.6 0.35 -0.3
62 AT1G79360 organic cation/carnitine transporter 2 organic cation/carnitine
transporter 2, ORGANIC CATION
TRANSPORTER 2, organic
cation/carnitine transporter 2		 0.6 0.32 -0.32
63 AT4G18425 Protein of unknown function (DUF679) 0.6 0.31 -0.31
64 AT2G44900 ARABIDILLO-1 ARABIDILLO-1, F-box Armadillo
protein 1		 -0.59 0.32 -0.32
65 AT3G26030 serine/threonine protein phosphatase 2A 55 kDa regulatory
subunit B prime delta		 serine/threonine protein
phosphatase 2A 55 kDa regulatory
subunit B prime delta		 -0.59 0.31 -0.31
66 AT5G10770 Eukaryotic aspartyl protease family protein 0.59 0.32 -0.32
67 AT2G34440 AGAMOUS-like 29 AGAMOUS-like 29 0.59 0.32 -0.3
68 AT4G34265 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G15000.3); Has 76 Blast
hits to 76 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.3 -0.33
69 AT5G52770 Copper transport protein family -0.59 0.33 -0.3
70 AT2G32050 Family of unknown function (DUF572) -0.59 0.32 -0.31
71 AT5G06210 RNA binding (RRM/RBD/RNP motifs) family protein -0.59 0.31 -0.31
72 AT5G43550 F-box associated ubiquitination effector family protein -0.59 0.32 -0.31
73 AT3G43120 SAUR-like auxin-responsive protein family -0.59 0.3 -0.33
74 AT3G15720 Pectin lyase-like superfamily protein 0.58 0.32 -0.33
75 AT3G25470 bacterial hemolysin-related -0.58 0.32 -0.31
76 AT1G08430 aluminum-activated malate transporter 1 aluminum-activated malate
transporter 1, ARABIDOPSIS
THALIANA ALUMINUM-ACTIVATED MALATE
TRANSPORTER 1		 0.58 0.33 -0.31
77 AT4G11650 osmotin 34 osmotin 34, osmotin 34 0.58 0.34 -0.31
78 AT4G16730 terpene synthase 02 terpene synthase 02 -0.58 0.32 -0.33
79 AT2G32000 DNA topoisomerase, type IA, core -0.58 0.3 -0.33
80 AT3G60700 Protein of unknown function (DUF1163) -0.57 0.31 -0.32
81 AT2G32670 vesicle-associated membrane protein 725 vesicle-associated membrane
protein 725, vesicle-associated
membrane protein 725		 -0.57 0.33 -0.29
82 AT5G02910 F-box/RNI-like superfamily protein -0.57 0.31 -0.33
83 AT1G64440 NAD(P)-binding Rossmann-fold superfamily protein ROOT EPIDERMAL BULGER1, ROOT HAIR
DEFECTIVE 1, UDP-GLUCOSE
4-EPIMERASE		 -0.57 0.34 -0.32
84 AT5G27630 acyl-CoA binding protein 5 acyl-CoA binding protein 5 -0.57 0.3 -0.29
85 AT5G19380 CRT (chloroquine-resistance transporter)-like transporter 1 CRT (chloroquine-resistance
transporter)-like transporter 1		 -0.57 0.32 -0.32
86 AT3G52370 FASCICLIN-like arabinogalactan protein 15 precursor FASCICLIN-like arabinogalactan
protein 15 precursor		 -0.57 0.3 -0.32
87 AT1G26650 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G69430.1); Has 205 Blast hits
to 204 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 205; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.57 0.33 -0.31
88 AT4G38210 expansin A20 ATEXP20, expansin A20, ATHEXP
ALPHA 1.23, EXPANSIN 20, expansin
A20		 0.57 0.31 -0.3
89 AT4G17220 microtubule-associated proteins 70-5 microtubule-associated proteins
70-5, microtubule-associated
proteins 70-5		 0.57 0.31 -0.31
90 AT5G49910 chloroplast heat shock protein 70-2 chloroplast heat shock protein
70-2, HEAT SHOCK PROTEIN 70-7		 -0.57 0.32 -0.33
91 AT5G46210 cullin4 ATCUL4, cullin4 -0.57 0.31 -0.31
92 AT1G10710 poor homologous synapsis 1 POOR HOMOLOGOUS SYNAPSIS 1 -0.57 0.32 -0.29
93 AT1G20160 Subtilisin-like serine endopeptidase family protein ATSBT5.2 0.57 0.3 -0.32
94 AT3G10180 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.57 0.32 -0.32
95 AT1G22990 Heavy metal transport/detoxification superfamily protein heavy metal associated
isoprenylated plant protein 22		 0.56 0.3 -0.34
96 AT4G28760 Protein of unknown function (DUF3741) -0.56 0.32 -0.31
97 AT5G16620 hydroxyproline-rich glycoprotein family protein translocon at the inner envelope
membrane of chloroplasts 40,
pigment defective embryo 120,
translocon at the inner envelope
membrane of chloroplasts 40		 -0.56 0.31 -0.32
98 AT1G53440 Leucine-rich repeat transmembrane protein kinase -0.56 0.33 -0.31
99 AT4G31060 Integrase-type DNA-binding superfamily protein -0.56 0.31 -0.32
100 AT1G64185 Lactoylglutathione lyase / glyoxalase I family protein -0.56 0.32 -0.31
101 AT1G72160 Sec14p-like phosphatidylinositol transfer family protein 0.56 0.31 -0.32
102 AT4G04450 WRKY family transcription factor AtWRKY42, WRKY42 -0.56 0.33 -0.33
103 AT1G62510 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.56 0.3 -0.32
104 AT1G53940 GDSL-motif lipase 2 GDSL-motif lipase 2 -0.56 0.31 -0.31
105 AT5G42670 Agenet domain-containing protein -0.56 0.32 -0.28
106 AT1G09660 RNA-binding KH domain-containing protein -0.56 0.33 -0.31
107 AT4G32750 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.56 0.31 -0.33
108 AT4G36430 Peroxidase superfamily protein 0.56 0.33 -0.3
109 AT3G47740 ABC2 homolog 2 ATP-binding cassette A3, A.
THALIANA ABC2 HOMOLOG 2, ABC2
homolog 2		 -0.56 0.32 -0.32
110 AT5G38820 Transmembrane amino acid transporter family protein -0.56 0.31 -0.31
111 AT1G14140 Mitochondrial substrate carrier family protein -0.56 0.32 -0.31
112 AT2G43580 Chitinase family protein 0.55 0.34 -0.3
113 AT5G40020 Pathogenesis-related thaumatin superfamily protein 0.55 0.32 -0.32
114 AT1G21220 transposable element gene 0.55 0.35 -0.33
115 AT2G13100 Major facilitator superfamily protein glycerol-3-phosphate permease 5,
glycerol-3-phosphate permease 5		 0.55 0.32 -0.31
116 AT2G25000 WRKY DNA-binding protein 60 ATWRKY60, WRKY DNA-binding protein
60		 0.55 0.34 -0.32
117 AT4G00940 Dof-type zinc finger DNA-binding family protein 0.55 0.31 -0.34
118 AT4G11200 transposable element gene 0.55 0.32 -0.31
119 AT2G38530 lipid transfer protein 2 cell growth defect factor-3, LP2,
lipid transfer protein 2		 0.54 0.31 -0.31
120 AT4G03153 Kinase interacting (KIP1-like) family protein 0.54 0.28 -0.32
121 AT5G59845 Gibberellin-regulated family protein 0.54 0.32 -0.34
122 AT1G24450 Ribonuclease III family protein NUCLEAR FUSION DEFECTIVE 2 0.54 0.31 -0.31
123 AT1G75830 low-molecular-weight cysteine-rich 67 low-molecular-weight cysteine-rich
67, PLANT DEFENSIN 1.1		 0.54 0.33 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
124 C0146 Mannitol D-Mannitol Mannitol mannitol degradation II 0.85 0.43 -0.47 C0146
125 C0143 Maltitol - - starch degradation II 0.78 0.44 -0.45
126 C0003 α-Tocopherol - alpha-Tocopherol vitamin E biosynthesis -0.77 0.45 -0.45 C0003
127 C0010 myo-Inositol-1-phosphate D,L-myo-Inositol-1-phosphate 1D-myo-Inositol (3)-phosphate myo-inositol biosynthesis,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 		-0.76 0.45 -0.45 C0010
128 C0123 Isoleucine D,L-Isoleucine L-Isoleucine tRNA charging,
isoleucine biosynthesis I (from threonine),
jasmonoyl-amino acid conjugates biosynthesis I,
isoleucine degradation I 		0.75 0.44 -0.47 C0123