AT3G29185 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT3G29185
Description Domain of unknown function (DUF3598)
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G29185 Domain of unknown function (DUF3598) 1 0.31 -0.31
2 AT4G39040 RNA-binding CRS1 / YhbY (CRM) domain protein 0.95 0.31 -0.3
3 AT1G49380 cytochrome c biogenesis protein family 0.94 0.32 -0.33
4 AT3G55040 glutathione transferase lambda 2 glutathione transferase lambda 2 0.93 0.32 -0.3
5 AT5G36170 high chlorophyll fluorescent 109 ATPRFB, high chlorophyll
fluorescent 109		 0.93 0.31 -0.33
6 AT1G64355 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3593 (InterPro:IPR021995);
Has 301 Blast hits to 301 proteins in 96 species: Archae -
0; Bacteria - 143; Metazoa - 0; Fungi - 0; Plants - 44;
Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).		 0.93 0.32 -0.3
7 AT3G20230 Ribosomal L18p/L5e family protein 0.93 0.31 -0.31
8 AT2G18710 SECY homolog 1 SECY homolog 1 0.93 0.31 -0.33
9 AT5G53580 NAD(P)-linked oxidoreductase superfamily protein AtPLR1, pyridoxal reductase 1 0.92 0.31 -0.32
10 AT3G19810 Protein of unknown function (DUF177) 0.92 0.33 -0.32
11 AT4G14890 2Fe-2S ferredoxin-like superfamily protein ferredoxin C 2 0.92 0.33 -0.31
12 AT1G64510 Translation elongation factor EF1B/ribosomal protein S6
family protein		 0.92 0.32 -0.31
13 AT5G46420 16S rRNA processing protein RimM family 0.92 0.31 -0.32
14 AT5G11480 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.91 0.31 -0.3
15 AT4G17740 Peptidase S41 family protein 0.91 0.32 -0.32
16 AT3G24430 ATP binding HIGH-CHLOROPHYLL-FLUORESCENCE 101 0.91 0.32 -0.33
17 AT1G59840 cofactor assembly of complex C cofactor assembly of complex C 0.91 0.32 -0.33
18 AT2G20890 photosystem II reaction center PSB29 protein photosystem II reaction center
PSB29 protein, THYLAKOID
FORMATION1		 0.91 0.3 -0.3
19 AT4G20130 plastid transcriptionally active 14 plastid transcriptionally active
14		 0.91 0.31 -0.32
20 AT5G39210 chlororespiratory reduction 7 CHLORORESPIRATORY REDUCTION 7 0.91 0.32 -0.31
21 AT1G01080 RNA-binding (RRM/RBD/RNP motifs) family protein 0.91 0.3 -0.31
22 AT1G08520 ALBINA 1 ALB-1V, ALBINA 1, CHLD, PIGMENT
DEFECTIVE EMBRYO 166, V157		 0.91 0.32 -0.31
23 AT1G53520 Chalcone-flavanone isomerase family protein 0.91 0.3 -0.33
24 AT3G13120 Ribosomal protein S10p/S20e family protein 0.91 0.31 -0.3
25 AT3G08920 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.91 0.3 -0.33
26 AT2G33800 Ribosomal protein S5 family protein EMBRYO DEFECTIVE 3113 0.91 0.3 -0.33
27 AT3G52150 RNA-binding (RRM/RBD/RNP motifs) family protein 0.91 0.32 -0.31
28 AT2G29180 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 34
Blast hits to 33 proteins in 16 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses
- 0; Other Eukaryotes - 1 (source: NCBI BLink).		 0.9 0.33 -0.31
29 AT2G40690 NAD-dependent glycerol-3-phosphate dehydrogenase family
protein		 GLY1, SUPPRESSOR OF FATTY ACID
DESATURASE DEFICIENCY 1		 0.9 0.29 -0.31
30 AT5G65220 Ribosomal L29 family protein 0.9 0.32 -0.32
31 AT4G27600 pfkB-like carbohydrate kinase family protein GENES NECESSARY FOR THE
ACHIEVEMENT OF RUBISCO
ACCUMULATION 5		 0.9 0.32 -0.33
32 AT4G25080 magnesium-protoporphyrin IX methyltransferase magnesium-protoporphyrin IX
methyltransferase		 0.9 0.32 -0.31
33 AT5G47190 Ribosomal protein L19 family protein 0.9 0.32 -0.31
34 AT2G03420 unknown protein; Has 38 Blast hits to 38 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.9 0.34 -0.32
35 AT4G19100 Protein of unknown function (DUF3464) photosynthesis affected mutant 68 0.9 0.3 -0.3
36 AT3G18890 NAD(P)-binding Rossmann-fold superfamily protein translocon at the inner envelope
membrane of chloroplasts 62,
translocon at the inner envelope
membrane of chloroplasts 62		 0.9 0.3 -0.32
37 AT1G08540 RNApolymerase sigma subunit 2 ABC1, SIGMA FACTOR 1, SIGMA FACTOR
2, RNA POLYMERASE SIGMA SUBUNIT 1,
RNApolymerase sigma subunit 2,
SIGA, SIGMA FACTOR B		 0.9 0.33 -0.32
38 AT2G28605 Photosystem II reaction center PsbP family protein 0.9 0.32 -0.33
39 AT2G30695 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
protein folding, protein transport; LOCATED IN: chloroplast
stroma, chloroplast; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Trigger factor, ribosome-binding, bacterial
(InterPro:IPR008881); Has 253 Blast hits to 253 proteins in
72 species: Archae - 0; Bacteria - 138; Metazoa - 0; Fungi
- 0; Plants - 40; Viruses - 0; Other Eukaryotes - 75
(source: NCBI BLink).		 0.9 0.32 -0.32
40 AT1G17200 Uncharacterised protein family (UPF0497) 0.9 0.34 -0.35
41 AT3G18680 Amino acid kinase family protein 0.9 0.33 -0.32
42 AT5G03940 chloroplast signal recognition particle 54 kDa subunit 54 CHLOROPLAST PROTEIN,
chloroplast signal recognition
particle 54 kDa subunit,
FIFTY-FOUR CHLOROPLAST HOMOLOGUE,
SIGNAL RECOGNITION PARTICLE 54 KDA
SUBUNIT CHLOROPLAST PROTEIN		 0.9 0.31 -0.33
43 AT5G57930 Arabidopsis thaliana protein of unknown function (DUF794) ACCUMULATION OF PHOTOSYSTEM ONE 2,
embryo defective 1629		 0.9 0.31 -0.32
44 AT1G48350 Ribosomal L18p/L5e family protein EMBRYO DEFECTIVE 3105 0.9 0.3 -0.32
45 AT5G44650 Encodes a chloroplast protein that induces tolerance to
multiple environmental stresses and reduces photooxidative
damage.		 Arabidopsis thaliana chloroplast
protein-enhancing stress
tolerance, chloroplast
protein-enhancing stress
tolerance, Ycf3-interacting
protein 1		 0.9 0.33 -0.31
46 AT5G08280 hydroxymethylbilane synthase hydroxymethylbilane synthase 0.9 0.32 -0.32
47 AT3G49140 Pentatricopeptide repeat (PPR) superfamily protein 0.9 0.32 -0.3
48 AT3G25805 unknown protein; Has 98 Blast hits to 98 proteins in 45
species: Archae - 0; Bacteria - 51; Metazoa - 0; Fungi - 0;
Plants - 43; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.9 0.33 -0.31
49 AT1G14270 CAAX amino terminal protease family protein 0.9 0.3 -0.33
50 AT1G11860 Glycine cleavage T-protein family 0.9 0.3 -0.31
51 AT5G52970 thylakoid lumen 15.0 kDa protein 0.9 0.31 -0.32
52 AT4G24750 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.9 0.32 -0.32
53 AT1G76450 Photosystem II reaction center PsbP family protein 0.89 0.29 -0.33
54 AT3G54210 Ribosomal protein L17 family protein 0.89 0.32 -0.33
55 AT5G13140 Pollen Ole e 1 allergen and extensin family protein 0.89 0.32 -0.31
56 AT3G12930 Lojap-related protein 0.89 0.31 -0.31
57 AT5G14100 non-intrinsic ABC protein 14 ATP-binding cassette I11,
ARABIDOPSIS THALIANANON-INTRINSIC
ABC PROTEIN 14, non-intrinsic ABC
protein 14		 0.89 0.32 -0.3
58 AT3G51510 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN:
22 plant structures; EXPRESSED DURING: 13 growth stages;
Has 42 Blast hits to 42 proteins in 19 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses
- 0; Other Eukaryotes - 2 (source: NCBI BLink).		 0.89 0.31 -0.31
59 AT5G02710 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 21
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Uncharacterised protein family
UPF0153 (InterPro:IPR005358); Has 240 Blast hits to 240
proteins in 73 species: Archae - 10; Bacteria - 110;
Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other
Eukaryotes - 95 (source: NCBI BLink).		 0.89 0.33 -0.31
60 AT1G44920 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3054 (InterPro:IPR021414);
Has 246 Blast hits to 246 proteins in 119 species: Archae -
14; Bacteria - 181; Metazoa - 0; Fungi - 0; Plants - 45;
Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).		 0.89 0.32 -0.31
61 AT4G38490 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.89 0.29 -0.33
62 AT2G32765 small ubiquitinrelated modifier 5 ATSUMO5, SUMO 5, small
ubiquitinrelated modifier 5		 0.89 0.3 -0.32
63 AT5G23310 Fe superoxide dismutase 3 Fe superoxide dismutase 3 0.89 0.32 -0.31
64 AT4G11175 Nucleic acid-binding, OB-fold-like protein 0.89 0.3 -0.32
65 AT4G16410 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF751 (InterPro:IPR008470); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.89 0.32 -0.32
66 AT3G14930 Uroporphyrinogen decarboxylase HEME1 0.89 0.31 -0.31
67 AT3G12685 Acid phosphatase/vanadium-dependent haloperoxidase-related
protein		 0.89 0.32 -0.32
68 AT2G17240 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 14 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G24506.1); Has 2795
Blast hits to 943 proteins in 155 species: Archae - 0;
Bacteria - 388; Metazoa - 809; Fungi - 72; Plants - 153;
Viruses - 54; Other Eukaryotes - 1319 (source: NCBI BLink).		 0.89 0.31 -0.33
69 AT2G26930 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase 4-(cytidine
5'-phospho)-2-C-methyl-D-erithrito
l kinase, 4-(cytidine
5'-phospho)-2-C-methyl-D-erithrito
l kinase, 4-(cytidine
5′-diphospho)-2-C-methyl-d-e
rythritol kinase, 4-(cytidine
5′-diphospho)-2-C-methyl-d-e
rythritol kinase, ISPE, PIGMENT
DEFECTIVE 277		 0.89 0.31 -0.32
70 AT5G16140 Peptidyl-tRNA hydrolase family protein 0.89 0.32 -0.31
71 AT5G38290 Peptidyl-tRNA hydrolase family protein 0.89 0.32 -0.32
72 AT4G10300 RmlC-like cupins superfamily protein 0.89 0.33 -0.32
73 AT1G67740 photosystem II BY photosystem II BY, YCF32 0.89 0.31 -0.31
74 AT2G47450 chloroplast signal recognition particle component (CAO) CHAOS, CHLOROPLAST SIGNAL
RECOGNITION PARTICLE 43		 0.88 0.31 -0.3
75 AT2G34640 plastid transcriptionally active 12 HEMERA, plastid transcriptionally
active 12		 0.88 0.32 -0.32
76 AT4G34290 SWIB/MDM2 domain superfamily protein 0.88 0.32 -0.32
77 AT5G10690 pentatricopeptide (PPR) repeat-containing protein / CBS
domain-containing protein		 0.88 0.31 -0.3
78 AT3G20680 Domain of unknown function (DUF1995) 0.88 0.32 -0.3
79 AT5G42765 INVOLVED IN: biological_process unknown; LOCATED IN:
thylakoid, chloroplast thylakoid membrane, chloroplast;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Twin-arginine
translocation pathway, signal sequence
(InterPro:IPR006311); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.88 0.35 -0.31
80 AT2G41720 Tetratricopeptide repeat (TPR)-like superfamily protein EMBRYO DEFECTIVE 2654 0.88 0.32 -0.31
81 AT5G66470 RNA binding;GTP binding 0.88 0.33 -0.29
82 AT5G13510 Ribosomal protein L10 family protein EMBRYO DEFECTIVE 3136 0.88 0.31 -0.33
83 AT1G78180 Mitochondrial substrate carrier family protein 0.88 0.33 -0.34
84 AT3G55250 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, chloroplast, nucleus; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 46
Blast hits to 46 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 PIGMENT DEFECTIVE 329 0.88 0.33 -0.32
85 AT3G04260 plastid transcriptionally active 3 PIGMENT DEFECTIVE 324, plastid
transcriptionally active 3		 0.88 0.36 -0.31
86 AT3G05600 alpha/beta-Hydrolases superfamily protein 0.88 0.29 -0.31
87 AT1G11430 plastid developmental protein DAG, putative 0.88 0.33 -0.33
88 AT4G34830 Pentatricopeptide repeat (PPR) superfamily protein MATURATION OF RBCL 1, PIGMENT
DEFECTIVE 346		 0.88 0.32 -0.31
89 AT3G23760 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: vacuole; EXPRESSED
IN: 20 plant structures; EXPRESSED DURING: 13 growth
stages; BEST Arabidopsis thaliana protein match is:
transferases, transferring glycosyl groups
(TAIR:AT4G14100.1); Has 108 Blast hits to 104 proteins in
19 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi -
0; Plants - 90; Viruses - 0; Other Eukaryotes - 10 (source:
NCBI BLink).		 0.88 0.33 -0.33
90 AT3G01660 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.88 0.3 -0.33
91 AT5G52440 Bacterial sec-independent translocation protein mttA/Hcf106 HIGH CHLOROPHYLL FLUORESCENCE 106 0.88 0.34 -0.32
92 AT4G26370 antitermination NusB domain-containing protein 0.88 0.31 -0.31
93 AT1G73110 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.88 0.35 -0.31
94 AT1G20020 ferredoxin-NADP(+)-oxidoreductase 2 LEAF FNR 2,
ferredoxin-NADP(+)-oxidoreductase
2		 0.88 0.32 -0.31
95 AT2G24060 Translation initiation factor 3 protein 0.88 0.33 -0.32
96 AT5G58260 oxidoreductases, acting on NADH or NADPH, quinone or
similar compound as acceptor		 NADH dehydrogenase-like complex N 0.88 0.3 -0.3
97 AT1G10960 ferredoxin 1 ferredoxin 1, ferredoxin 1 0.88 0.33 -0.32
98 AT4G38160 Mitochondrial transcription termination factor family
protein		 pigment defective 191 0.88 0.31 -0.3
99 AT2G17972 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN:
22 plant structures; EXPRESSED DURING: 14 growth stages;
Has 34 Blast hits to 34 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.88 0.31 -0.31
100 AT5G51100 Fe superoxide dismutase 2 Fe superoxide dismutase 2 0.88 0.29 -0.31
101 AT5G11270 overexpressor of cationic peroxidase 3 overexpressor of cationic
peroxidase 3		 0.88 0.32 -0.34
102 AT5G51545 low psii accumulation2 low psii accumulation2 0.88 0.32 -0.32
103 AT5G52100 Dihydrodipicolinate reductase, bacterial/plant chlororespiration reduction 1 0.88 0.31 -0.31
104 AT5G38520 alpha/beta-Hydrolases superfamily protein 0.88 0.31 -0.32
105 AT1G14030 Rubisco methyltransferase family protein 0.88 0.33 -0.31
106 AT5G19620 outer envelope protein of 80 kDa ARABIDOPSIS THALIANA OUTER
ENVELOPE PROTEIN OF 80 KDA, EMBRYO
DEFECTIVE 213, outer envelope
protein of 80 kDa, translocon at
the outer envelope membrane of
chloroplasts 75-V		 0.88 0.3 -0.31
107 AT3G10500 NAC domain containing protein 53 NAC domain containing protein 53,
NAC domain containing protein 53		 -0.86 0.32 -0.33
108 AT3G45010 serine carboxypeptidase-like 48 serine carboxypeptidase-like 48 -0.83 0.35 -0.33
109 AT2G41220 glutamate synthase 2 glutamate synthase 2 -0.82 0.34 -0.31
110 AT1G76790 O-methyltransferase family protein indole glucosinolate
O-methyltransferase 5		 -0.79 0.31 -0.32
111 AT2G41380 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.79 0.32 -0.32
112 AT3G22850 Aluminium induced protein with YGL and LRDR motifs -0.78 0.31 -0.33
113 AT5G06750 Protein phosphatase 2C family protein -0.77 0.3 -0.31
114 AT1G14240 GDA1/CD39 nucleoside phosphatase family protein -0.76 0.3 -0.32
115 AT4G29690 Alkaline-phosphatase-like family protein -0.76 0.32 -0.33
116 AT5G20960 aldehyde oxidase 1 aldehyde oxidase 1, aldehyde
oxidase 1, aldehyde oxidase alpha,
ARABIDOPSIS THALIANA ALDEHYDE
OXIDASE 1, ATAO, Arabidopsis
thaliana aldehyde oxidase 1		 -0.76 0.31 -0.31
117 AT5G49280 hydroxyproline-rich glycoprotein family protein -0.76 0.31 -0.32
118 AT1G17180 glutathione S-transferase TAU 25 glutathione S-transferase TAU 25,
glutathione S-transferase TAU 25		 -0.75 0.31 -0.33
119 AT4G39950 cytochrome P450, family 79, subfamily B, polypeptide 2 cytochrome P450, family 79,
subfamily B, polypeptide 2		 -0.75 0.3 -0.32
120 AT3G53480 pleiotropic drug resistance 9 ATP-binding cassette G37,
PLEIOTROPIC DRUG RESISTANCE 9,
pleiotropic drug resistance 9,
polar auxin transport inhibitor
sensitive 1		 -0.75 0.33 -0.31
121 AT1G35260 MLP-like protein 165 MLP-like protein 165 -0.74 0.31 -0.32
122 AT5G59490 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.73 0.32 -0.35
123 AT5G06300 Putative lysine decarboxylase family protein LONELY GUY 7 -0.72 0.32 -0.34
124 AT1G09560 germin-like protein 5 germin-like protein 5 -0.71 0.32 -0.31
125 AT3G29310 calmodulin-binding protein-related -0.71 0.3 -0.32
126 AT3G21770 Peroxidase superfamily protein -0.7 0.32 -0.31
127 AT3G03520 non-specific phospholipase C3 non-specific phospholipase C3 -0.7 0.3 -0.31
128 AT3G61850 Dof-type zinc finger DNA-binding family protein dof affecting germination 1 -0.69 0.35 -0.32
129 AT3G26440 Protein of unknown function (DUF707) -0.69 0.34 -0.32
130 AT2G30130 Lateral organ boundaries (LOB) domain family protein ASL5, LBD12, PEACOCK 1 -0.69 0.32 -0.31
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
131 C0241 Stigmasterol 3-O-β-D-glucoside - Stigmasterol 3-O-β-D-glucoside - -0.81 0.49 -0.48 C0241