AT3G28420 : -
Query Information
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AGICode AT3G28420
Description Putative membrane lipoprotein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G28420 Putative membrane lipoprotein 1 0.29 -0.3
2 AT2G32010 CVP2 like 1 CVP2 like 1 0.79 0.31 -0.34
3 AT1G69230 SPIRAL1-like2 SPIRAL1-like2 0.79 0.3 -0.32
4 AT3G15550 unknown protein; Has 25732 Blast hits to 16979 proteins in
961 species: Archae - 144; Bacteria - 1801; Metazoa -
12681; Fungi - 1868; Plants - 912; Viruses - 94; Other
Eukaryotes - 8232 (source: NCBI BLink).		 0.79 0.33 -0.34
5 AT2G27730 copper ion binding -0.76 0.3 -0.31
6 AT5G57300 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.76 0.31 -0.33
7 AT1G69420 DHHC-type zinc finger family protein 0.76 0.31 -0.32
8 AT2G24230 Leucine-rich repeat protein kinase family protein 0.75 0.31 -0.32
9 AT1G23790 Plant protein of unknown function (DUF936) 0.75 0.32 -0.29
10 AT2G05210 Nucleic acid-binding, OB-fold-like protein ATPOT1, Protection of Telomeres 1a 0.75 0.33 -0.3
11 AT5G11520 aspartate aminotransferase 3 aspartate aminotransferase 3,
YELLOW-LEAF-SPECIFIC GENE 4		 -0.75 0.31 -0.31
12 AT4G25810 xyloglucan endotransglycosylase 6 xyloglucan
endotransglucosylase/hydrolase 23,
xyloglucan endotransglycosylase 6		 -0.74 0.33 -0.31
13 AT4G19170 nine-cis-epoxycarotenoid dioxygenase 4 carotenoid cleavage dioxygenase 4,
nine-cis-epoxycarotenoid
dioxygenase 4		 0.74 0.34 -0.32
14 AT5G11510 myb domain protein 3r-4 myb domain protein 3R4, myb domain
protein 3r-4		 0.74 0.31 -0.3
15 AT1G15670 Galactose oxidase/kelch repeat superfamily protein -0.74 0.32 -0.32
16 AT1G30600 Subtilase family protein 0.74 0.3 -0.32
17 AT3G20150 Kinesin motor family protein 0.73 0.34 -0.31
18 AT3G17840 receptor-like kinase 902 receptor-like kinase 902 0.73 0.31 -0.31
19 AT3G61070 peroxin 11E peroxin 11E -0.73 0.29 -0.32
20 AT5G06710 homeobox from Arabidopsis thaliana homeobox from Arabidopsis thaliana 0.73 0.29 -0.32
21 AT2G31750 UDP-glucosyl transferase 74D1 UDP-glucosyl transferase 74D1 -0.73 0.31 -0.29
22 AT1G19730 Thioredoxin superfamily protein thioredoxin H-type 4, ATTRX4 -0.72 0.31 -0.32
23 AT4G03270 Cyclin D6;1 Cyclin D6;1 0.72 0.3 -0.31
24 AT4G24110 unknown protein; Has 76 Blast hits to 76 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0;
Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.72 0.32 -0.31
25 AT5G03700 D-mannose binding lectin protein with Apple-like
carbohydrate-binding domain		 -0.72 0.31 -0.31
26 AT4G20430 Subtilase family protein 0.71 0.33 -0.31
27 AT3G19570 Family of unknown function (DUF566) QWRF domain containing 1, SNOWY
COTYLEDON 3		 0.71 0.32 -0.3
28 AT1G14450 NADH dehydrogenase (ubiquinone)s -0.71 0.31 -0.3
29 AT1G16680 Chaperone DnaJ-domain superfamily protein 0.7 0.33 -0.3
30 AT5G60620 glycerol-3-phosphate acyltransferase 9 glycerol-3-phosphate
acyltransferase 9		 -0.7 0.3 -0.32
31 AT5G67490 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1674 (InterPro:IPR012875); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.7 0.35 -0.32
32 AT5G66440 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G34560.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.7 0.33 -0.31
33 AT5G40650 succinate dehydrogenase 2-2 succinate dehydrogenase 2-2 -0.7 0.29 -0.29
34 AT3G23150 Signal transduction histidine kinase, hybrid-type, ethylene
sensor		 ethylene response 2 -0.7 0.31 -0.31
35 AT3G17710 F-box and associated interaction domains-containing protein -0.7 0.3 -0.31
36 AT5G42890 sterol carrier protein 2 STEROL CARRIER PROTEIN 2, sterol
carrier protein 2		 -0.69 0.32 -0.29
37 AT2G28120 Major facilitator superfamily protein -0.69 0.31 -0.31
38 AT4G14200 Pentatricopeptide repeat (PPR) superfamily protein 0.69 0.31 -0.32
39 AT2G40890 cytochrome P450, family 98, subfamily A, polypeptide 3 cytochrome P450, family 98,
subfamily A, polypeptide 3		 -0.69 0.3 -0.31
40 AT5G05100 Single-stranded nucleic acid binding R3H protein -0.69 0.32 -0.3
41 AT2G45210 SAUR-like auxin-responsive protein family -0.69 0.31 -0.3
42 AT2G29890 villin-like 1 ATVLN1, villin 1 0.69 0.3 -0.32
43 AT2G44190 Family of unknown function (DUF566) ENDOSPERM DEFECTIVE 1, EMBRYO
DEFECTIVE 3116, QWRF domain
containing 5		 0.69 0.3 -0.32
44 AT3G22530 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G14830.1); Has 77 Blast
hits to 77 proteins in 12 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.69 0.33 -0.32
45 AT1G63300 Myosin heavy chain-related protein 0.69 0.3 -0.32
46 AT2G46390 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 4 Blast hits to 4
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 succinate dehydrogenase 8 -0.69 0.32 -0.3
47 AT2G23090 Uncharacterised protein family SERF -0.69 0.31 -0.32
48 AT5G07810 SNF2 domain-containing protein / helicase domain-containing
protein / HNH endonuclease domain-containing protein		 0.69 0.31 -0.29
49 AT5G42300 ubiquitin-like protein 5 ubiquitin-like protein 5 -0.69 0.33 -0.29
50 AT4G02620 vacuolar ATPase subunit F family protein -0.68 0.31 -0.33
51 AT5G43330 Lactate/malate dehydrogenase family protein cytosolic-NAD-dependent malate
dehydrogenase 2		 -0.68 0.32 -0.34
52 AT5G47890 NADH-ubiquinone oxidoreductase B8 subunit, putative -0.68 0.31 -0.32
53 AT2G32920 PDI-like 2-3 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 9, PDI-like
2-3, PROTEIN DISULFIDE ISOMERASE
9, PDI-like 2-3		 -0.68 0.32 -0.3
54 AT2G16270 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED
DURING: 9 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G16630.1); Has 1844
Blast hits to 1256 proteins in 271 species: Archae - 6;
Bacteria - 283; Metazoa - 434; Fungi - 153; Plants - 91;
Viruses - 52; Other Eukaryotes - 825 (source: NCBI BLink).		 0.68 0.29 -0.3
55 AT1G74340 dolichol phosphate-mannose biosynthesis regulatory
protein-related		 dolichol phosphate mannose
synthase 2		 -0.68 0.31 -0.3
56 AT2G37420 ATP binding microtubule motor family protein 0.68 0.33 -0.3
57 AT5G37010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; EXPRESSED
IN: 22 plant structures; EXPRESSED DURING: 13 growth
stages; BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT1G65710.1); Has 6746 Blast hits to 5259
proteins in 486 species: Archae - 7; Bacteria - 485;
Metazoa - 3508; Fungi - 577; Plants - 378; Viruses - 50;
Other Eukaryotes - 1741 (source: NCBI BLink).		 0.68 0.34 -0.29
58 AT1G59540 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ZCF125 0.68 0.29 -0.34
59 AT3G51480 glutamate receptor 3.6 glutamate receptor 3.6, GLR3.6,
glutamate receptor 3.6		 0.68 0.31 -0.33
60 AT3G20860 NIMA-related kinase 5 NIMA-related kinase 5,
NIMA-related kinase 5		 0.67 0.33 -0.33
61 AT3G52560 ubiquitin E2 variant 1D-4 MMS2 ZWEI HOMOLOGUE 4, UBIQUITIN
E2 VARIANT 1D, ubiquitin E2
variant 1D-4		 -0.67 0.33 -0.31
62 AT1G36050 Endoplasmic reticulum vesicle transporter protein -0.67 0.32 -0.33
63 AT1G31150 Domain of unknown function (DUF1985) 0.67 0.33 -0.33
64 AT5G08060 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 16 growth stages; Has 42 Blast hits to 42 proteins
in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 41; Viruses - 0; Other Eukaryotes - 1
(source: NCBI BLink).		 -0.67 0.32 -0.3
65 AT3G23170 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G14450.1); Has 74 Blast hits
to 74 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.67 0.33 -0.31
66 AT4G12340 copper ion binding -0.67 0.3 -0.32
67 AT4G39520 GTP-binding protein-related -0.67 0.34 -0.33
68 AT4G23710 vacuolar ATP synthase subunit G2 vacuolar ATP synthase subunit G2,
VACUOLAR ATP SYNTHASE SUBUNIT G2,
VHA-G2		 -0.67 0.3 -0.29
69 AT3G18820 RAB GTPase homolog G3F RAB GTPase homolog G3F, ATRABG3F,
RAB71, RAB7B, RAB GTPase homolog
G3F, RABG3F		 -0.66 0.31 -0.34
70 AT3G08650 ZIP metal ion transporter family -0.66 0.33 -0.32
71 AT5G10040 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G65207.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.66 0.33 -0.31
72 AT5G11960 Protein of unknown function (DUF803) -0.66 0.32 -0.33
73 AT3G52730 ubiquinol-cytochrome C reductase UQCRX/QCR9-like family
protein		 -0.66 0.31 -0.34
74 AT5G17610 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.66 0.33 -0.31
75 AT4G26710 ATPase, V0 complex, subunit E -0.66 0.32 -0.33
76 AT3G10860 Cytochrome b-c1 complex, subunit 8 protein -0.66 0.34 -0.33
77 AT3G29200 chorismate mutase 1 ARABIDOPSIS THALIANA CHORISMATE
MUTASE 1, chorismate mutase 1		 -0.66 0.3 -0.32
78 AT1G64740 alpha-1 tubulin alpha-1 tubulin -0.66 0.3 -0.3
79 AT3G16350 Homeodomain-like superfamily protein -0.66 0.31 -0.31
80 AT5G58710 rotamase CYP 7 rotamase CYP 7 -0.66 0.33 -0.31
81 AT1G54220 Dihydrolipoamide acetyltransferase, long form protein -0.66 0.3 -0.36
82 AT3G60380 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: hydroxyproline-rich glycoprotein family protein
(TAIR:AT4G16790.1); Has 6102 Blast hits to 3981 proteins in
424 species: Archae - 6; Bacteria - 372; Metazoa - 2603;
Fungi - 655; Plants - 291; Viruses - 28; Other Eukaryotes -
2147 (source: NCBI BLink).		 0.66 0.31 -0.33
83 AT1G06200 Peptidase S24/S26A/S26B/S26C family protein -0.65 0.32 -0.32
84 AT1G70550 Protein of Unknown Function (DUF239) 0.65 0.32 -0.32
85 AT2G35010 thioredoxin O1 thioredoxin O1, thioredoxin O1 -0.65 0.31 -0.3
86 AT4G24790 AAA-type ATPase family protein 0.65 0.31 -0.31
87 AT4G03010 RNI-like superfamily protein 0.65 0.29 -0.28
88 AT2G01850 endoxyloglucan transferase A3 ATXTH27, endoxyloglucan
transferase A3, XYLOGLUCAN
ENDOTRANSGLUCOSYLASE/HYDROLASE 27		 -0.65 0.31 -0.31
89 AT5G44030 cellulose synthase A4 cellulose synthase A4, IRREGULAR
XYLEM 5, NWS2		 0.65 0.31 -0.3
90 AT1G06400 Ras-related small GTP-binding family protein ARA-2, ARA2, ATRAB11E, ARABIDOPSIS
THALIANA RAB GTPASE HOMOLOG A1A		 -0.65 0.31 -0.31
91 AT1G21750 PDI-like 1-1 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 5, PDI-like
1-1, PROTEIN DISULFIDE ISOMERASE
5, PDI-like 1-1		 -0.65 0.32 -0.32
92 AT5G17280 CONTAINS InterPro DOMAIN/s: Oxidoreductase-like, N-terminal
(InterPro:IPR019180); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 -0.65 0.31 -0.31
93 AT2G44080 ARGOS-like ARGOS-like -0.65 0.34 -0.31
94 AT4G27180 kinesin 2 kinesin 2, KINESIN-LIKE PROTEIN IN
ARABIDOPSIS THALIANA B		 0.64 0.31 -0.32
95 AT2G22425 Microsomal signal peptidase 12 kDa subunit (SPC12) -0.64 0.3 -0.32
96 AT3G07480 2Fe-2S ferredoxin-like superfamily protein -0.64 0.31 -0.3
97 AT1G64450 Glycine-rich protein family 0.64 0.32 -0.32
98 AT4G26210 Mitochondrial ATP synthase subunit G protein -0.64 0.32 -0.31
99 AT1G66660 Protein with RING/U-box and TRAF-like domains -0.64 0.33 -0.3
100 AT2G25610 ATPase, F0/V0 complex, subunit C protein -0.64 0.34 -0.31
101 AT1G08770 prenylated RAB acceptor 1.E prenylated RAB acceptor 1.E -0.64 0.32 -0.31
102 AT2G36900 membrin 11 ATMEMB11, membrin 11 -0.64 0.3 -0.32
103 AT3G03270 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.64 0.32 -0.3
104 AT1G12280 LRR and NB-ARC domains-containing disease resistance
protein		 0.64 0.31 -0.31
105 AT5G55290 ATPase, V0 complex, subunit E -0.64 0.31 -0.3
106 AT5G55820 CONTAINS InterPro DOMAIN/s: Inner centromere protein,
ARK-binding region (InterPro:IPR005635); Has 1807 Blast
hits to 1807 proteins in 277 species: Archae - 0; Bacteria
- 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 WYRD 0.63 0.31 -0.29
107 AT5G36990 transposable element gene 0.63 0.33 -0.29
108 AT3G15050 IQ-domain 10 IQ-domain 10 0.63 0.3 -0.31
109 AT3G54720 Peptidase M28 family protein ALTERED MERISTEM PROGRAM 1,
CONSTITUTIVE MORPHOGENESIS 2,
HAUPTLING, Multifolia, PRIMORDIA
TIMING		 0.63 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
110 C0192 Oxalic acid - Oxalate ascorbate degradation 0.76 0.47 -0.43 C0192
111 C0063 Campesterol - Campesterol brassinosteroid biosynthesis I,
brassinosteroid biosynthesis II,
plant sterol biosynthesis,
brassinosteroid biosynthesis III 		0.7 0.47 -0.42 C0063