AT3G29035 : Arabidopsis NAC domain containing protein 59
Query Information
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AGICode AT3G29035
Description NAC domain containing protein 3
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G29035 NAC domain containing protein 3 Arabidopsis NAC domain containing
protein 59, NAC domain containing
protein 3, NAC domain containing
protein 3, ORE1 SISTER1		 1 0.32 -0.31
2 AT2G16790 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.78 0.29 -0.34
3 AT4G12980 Auxin-responsive family protein -0.77 0.3 -0.32
4 AT3G26960 Pollen Ole e 1 allergen and extensin family protein -0.75 0.31 -0.32
5 AT1G72970 Glucose-methanol-choline (GMC) oxidoreductase family
protein		 embryo sac development arrest 17,
HOTHEAD		 -0.75 0.31 -0.32
6 AT1G70370 polygalacturonase 2 polygalacturonase 2 -0.75 0.32 -0.3
7 AT2G28110 Exostosin family protein FRAGILE FIBER 8, IRREGULAR XYLEM 7 0.74 0.32 -0.3
8 AT3G13690 Protein kinase protein with adenine nucleotide alpha
hydrolases-like domain		 -0.72 0.28 -0.33
9 AT4G37750 Integrase-type DNA-binding superfamily protein AINTEGUMENTA, CKC, COMPLEMENTING A
PROTEIN KINASE C MUTANT 1, DRAGON		 -0.72 0.31 -0.32
10 AT1G04110 Subtilase family protein STOMATAL DENSITY AND DISTRIBUTION -0.71 0.3 -0.31
11 AT3G15680 Ran BP2/NZF zinc finger-like superfamily protein -0.71 0.32 -0.31
12 AT4G00180 Plant-specific transcription factor YABBY family protein YABBY3 -0.71 0.34 -0.3
13 AT5G50740 Heavy metal transport/detoxification superfamily protein -0.71 0.32 -0.29
14 AT4G01310 Ribosomal L5P family protein -0.7 0.34 -0.31
15 AT4G00480 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 ATMYC1, myc1 -0.7 0.34 -0.33
16 AT5G55730 FASCICLIN-like arabinogalactan 1 FASCICLIN-like arabinogalactan 1 -0.7 0.32 -0.33
17 AT3G45300 isovaleryl-CoA-dehydrogenase ATIVD,
isovaleryl-CoA-dehydrogenase,
ISOVALERYL-COA-DEHYDROGENASE		 0.7 0.32 -0.32
18 AT4G29020 glycine-rich protein -0.7 0.33 -0.32
19 AT3G58070 C2H2 and C2HC zinc fingers superfamily protein GLABROUS INFLORESCENCE STEMS -0.7 0.31 -0.3
20 AT4G35920 PLAC8 family protein mid1-complementing activity 1 -0.7 0.29 -0.31
21 AT5G19940 Plastid-lipid associated protein PAP / fibrillin family
protein		 -0.7 0.3 -0.31
22 AT2G24260 LJRHL1-like 1 LJRHL1-like 1 0.7 0.32 -0.32
23 AT3G63490 Ribosomal protein L1p/L10e family EMBRYO DEFECTIVE 3126 -0.7 0.32 -0.33
24 AT2G47940 DEGP protease 2 DEGP protease 2, EMBRYO DEFECTIVE
3117		 -0.69 0.29 -0.31
25 AT3G12760 CONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation
protein (InterPro:IPR014764), Protein of unknown function
DUF298 (InterPro:IPR005176), UBA-like (InterPro:IPR009060);
BEST Arabidopsis thaliana protein match is: Domain of
unknown function (DUF298) (TAIR:AT1G15860.2); Has 857 Blast
hits to 855 proteins in 202 species: Archae - 0; Bacteria -
0; Metazoa - 482; Fungi - 154; Plants - 139; Viruses - 0;
Other Eukaryotes - 82 (source: NCBI BLink).		 0.69 0.31 -0.32
26 AT4G28390 ADP/ATP carrier 3 ADP/ATP carrier 3, ATAAC3 0.69 0.32 -0.32
27 AT5G65410 homeobox protein 25 ARABIDOPSIS THALIANA HOMEOBOX
PROTEIN 25, homeobox protein 25,
ZINC FINGER HOMEODOMAIN 2, ZINC
FINGER HOMEODOMAIN 1		 -0.69 0.32 -0.3
28 AT2G42840 protodermal factor 1 protodermal factor 1 -0.68 0.33 -0.31
29 AT5G59520 ZRT/IRT-like protein 2 ZRT/IRT-like protein 2 0.68 0.32 -0.3
30 AT2G34510 Protein of unknown function, DUF642 -0.68 0.31 -0.31
31 AT5G20740 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.68 0.32 -0.29
32 AT2G45190 Plant-specific transcription factor YABBY family protein ABNORMAL FLORAL ORGANS,
FILAMENTOUS FLOWER, YABBY1		 -0.68 0.33 -0.33
33 AT2G40475 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G56260.2); Has 477 Blast hits
to 219 proteins in 41 species: Archae - 0; Bacteria - 4;
Metazoa - 91; Fungi - 61; Plants - 144; Viruses - 0; Other
Eukaryotes - 177 (source: NCBI BLink).		 ALTERED SEED GERMINATION 8 -0.68 0.3 -0.3
34 AT5G08540 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast, chloroplast
envelope; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.68 0.32 -0.33
35 AT3G07210 unknown protein; Has 97 Blast hits to 85 proteins in 31
species: Archae - 0; Bacteria - 14; Metazoa - 7; Fungi -
19; Plants - 37; Viruses - 0; Other Eukaryotes - 20
(source: NCBI BLink).		 -0.68 0.32 -0.32
36 AT1G73530 RNA-binding (RRM/RBD/RNP motifs) family protein -0.67 0.32 -0.31
37 AT1G20640 Plant regulator RWP-RK family protein -0.67 0.31 -0.31
38 AT5G16390 chloroplastic acetylcoenzyme A carboxylase 1 BIOTIN CARBOXYL CARRIER PROTEIN,
BIOTIN CARBOXYL-CARRIER PROTEIN 1,
BIOTIN CARBOXYL-CARRIER PROTEIN 1,
chloroplastic acetylcoenzyme A
carboxylase 1, CAC1-A, CAC1A		 -0.67 0.32 -0.32
39 AT3G63170 Chalcone-flavanone isomerase family protein -0.67 0.3 -0.32
40 AT3G56170 Ca-2+ dependent nuclease Ca-2+ dependent nuclease 0.67 0.33 -0.31
41 AT2G22230 Thioesterase superfamily protein -0.67 0.32 -0.33
42 AT3G15110 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane; EXPRESSED IN: 20 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF3082
(InterPro:IPR021434); Has 77 Blast hits to 77 proteins in
38 species: Archae - 0; Bacteria - 37; Metazoa - 0; Fungi -
0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 -0.67 0.31 -0.31
43 AT2G02540 homeobox protein 21 homeobox protein 21, homeobox
protein 21, ZINC FINGER
HOMEODOMAIN 4, ZINC FINGER
HOMEODOMAIN 3		 -0.67 0.32 -0.31
44 AT5G14000 NAC domain containing protein 84 NAC domain containing protein 84,
NAC domain containing protein 84		 0.67 0.33 -0.34
45 AT2G35860 FASCICLIN-like arabinogalactan protein 16 precursor FASCICLIN-like arabinogalactan
protein 16 precursor		 -0.67 0.33 -0.31
46 AT2G26330 Leucine-rich receptor-like protein kinase family protein ERECTA, QUANTITATIVE RESISTANCE TO
PLECTOSPHAERELLA 1		 -0.66 0.32 -0.3
47 AT1G67660 Restriction endonuclease, type II-like superfamily protein -0.66 0.3 -0.32
48 AT1G65510 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
endomembrane system; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: LP.06 six leaves visible, LP.04 four
leaves visible, 4 anthesis, petal differentiation and
expansion stage, LP.08 eight leaves visible; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G65486.1); Has 22 Blast hits to 22 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.66 0.32 -0.3
49 AT1G68400 leucine-rich repeat transmembrane protein kinase family
protein		 -0.66 0.33 -0.32
50 AT3G15190 chloroplast 30S ribosomal protein S20, putative -0.66 0.29 -0.34
51 AT5G62220 glycosyltransferase 18 glycosyltransferase 18,
glycosyltransferase 18		 -0.66 0.33 -0.33
52 AT5G52520 Class II aaRS and biotin synthetases superfamily protein OVULE ABORTION 6, PROLYL-TRNA
SYNTHETASE 1		 -0.65 0.32 -0.3
53 AT3G53700 Pentatricopeptide repeat (PPR) superfamily protein maternal effect embryo arrest 40 -0.65 0.31 -0.32
54 AT1G79450 ALA-interacting subunit 5 ALA-interacting subunit 5 0.65 0.32 -0.32
55 AT5G42720 Glycosyl hydrolase family 17 protein -0.65 0.3 -0.32
56 AT3G49650 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.65 0.31 -0.3
57 AT1G01640 BTB/POZ domain-containing protein 0.65 0.32 -0.32
58 AT4G39510 cytochrome P450, family 96, subfamily A, polypeptide 12 cytochrome P450, family 96,
subfamily A, polypeptide 12		 -0.65 0.33 -0.37
59 AT3G57160 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.65 0.31 -0.3
60 AT5G25770 alpha/beta-Hydrolases superfamily protein 0.65 0.34 -0.32
61 AT2G20570 GBF's pro-rich region-interacting factor 1 ARABIDOPSIS GOLDEN2-LIKE 1,
GOLDEN2-LIKE 1, GBF's pro-rich
region-interacting factor 1		 -0.65 0.3 -0.31
62 AT3G15030 TCP family transcription factor 4 maternal effect embryo arrest 35,
TCP family transcription factor 4		 -0.64 0.32 -0.3
63 AT1G03160 FZO-like FZO-like -0.64 0.34 -0.32
64 AT4G31805 WRKY family transcription factor -0.64 0.31 -0.32
65 AT2G37750 unknown protein; Has 21 Blast hits to 21 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.64 0.33 -0.32
66 AT2G02450 NAC domain containing protein 35 Arabidopsis NAC domain containing
protein 34, NAC domain containing
protein 35, LONG VEGETATIVE PHASE
1, NAC domain containing protein
35		 -0.64 0.31 -0.32
67 AT5G27560 Domain of unknown function (DUF1995) -0.64 0.32 -0.32
68 AT1G74970 ribosomal protein S9 ribosomal protein S9, TWN3 -0.64 0.31 -0.34
69 AT5G24870 RING/U-box superfamily protein 0.63 0.34 -0.3
70 AT4G20110 VACUOLAR SORTING RECEPTOR 7 binding protein of 80 kDa 3;1,
VACUOLAR SORTING RECEPTOR 3;1,
VACUOLAR SORTING RECEPTOR 7		 0.63 0.33 -0.31
71 AT1G32700 PLATZ transcription factor family protein 0.63 0.33 -0.34
72 AT3G14680 cytochrome P450, family 72, subfamily A, polypeptide 14 cytochrome P450, family 72,
subfamily A, polypeptide 14		 0.63 0.31 -0.29
73 AT5G39610 NAC domain containing protein 6 Arabidopsis NAC domain containing
protein 92, NAC domain containing
protein 2, NAC domain containing
protein 6, NAC domain containing
protein 2, NAC domain containing
protein 6, ORESARA 1		 0.62 0.31 -0.31
74 AT5G65210 bZIP transcription factor family protein TGA1 0.61 0.31 -0.32
75 AT5G07100 WRKY DNA-binding protein 26 WRKY DNA-binding protein 26 0.61 0.3 -0.34
76 AT4G32650 potassium channel in Arabidopsis thaliana 3 ARABIDOPSIS THALIANA K+ RECTIFYING
CHANNEL 1, A. thaliana
low-K+-tolerant 1, potassium
channel in Arabidopsis thaliana 3,
KC1		 0.61 0.32 -0.32
77 AT5G12330 Lateral root primordium (LRP) protein-related LATERAL ROOT PRIMORDIUM 1 0.61 0.32 -0.33
78 AT1G07610 metallothionein 1C metallothionein 1C 0.6 0.34 -0.29
79 AT3G49350 Ypt/Rab-GAP domain of gyp1p superfamily protein 0.6 0.32 -0.32
80 AT2G45210 SAUR-like auxin-responsive protein family 0.6 0.31 -0.34
81 AT2G47270 sequence-specific DNA binding transcription
factors;transcription regulators		 UPBEAT1 0.6 0.34 -0.3
82 AT1G17860 Kunitz family trypsin and protease inhibitor protein 0.6 0.32 -0.33
83 AT1G69790 Protein kinase superfamily protein 0.59 0.33 -0.34
84 AT4G18930 RNA ligase/cyclic nucleotide phosphodiesterase family
protein		 0.59 0.32 -0.31
85 AT4G28040 nodulin MtN21 /EamA-like transporter family protein 0.59 0.31 -0.32
86 AT4G02050 sugar transporter protein 7 sugar transporter protein 7 0.58 0.31 -0.32
87 AT5G57655 xylose isomerase family protein 0.57 0.31 -0.33
88 AT3G14360 alpha/beta-Hydrolases superfamily protein 0.57 0.32 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
89 C0252 Threonic acid D,L-Threonic acid L-Threonate ascorbic acid degradation -0.71 0.46 -0.47 C0252
90 C0227 Ribose D-Ribose D-Ribose ribose degradation,
guanosine nucleotides degradation I,
pyrimidine salvage pathway,
pyridine nucleotide cycling (plants),
adenine and adenosine salvage II,
guanosine nucleotides degradation II,
guanine and guanosine salvage II,
cis-zeatin biosynthesis,
adenosine nucleotides degradation I,
pyrimidine ribonucleosides degradation II 		0.71 0.46 -0.47 C0227
91 C0183 MST_3033.1 - - - -0.7 0.42 -0.46
92 C0239 Spermidine - Spermidine spermine biosynthesis,
spermine and spermidine degradation III,
beta-alanine biosynthesis I,
hypusine biosynthesis,
spermidine hydroxycinnamic acid conjugates biosynthesis,
spermidine biosynthesis I 		0.64 0.48 -0.44 C0239