AT3G22430 : -
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT3G22430
Description CONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380); BEST Arabidopsis thaliana protein match is: XS domain-containing protein / XS zinc finger domain-containing protein-related (TAIR:AT5G23570.1); Has 565 Blast hits to 510 proteins in 121 species: Archae - 2; Bacteria - 90; Metazoa - 191; Fungi - 32; Plants - 51; Viruses - 4; Other Eukaryotes - 195 (source: NCBI BLink).
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G22430 CONTAINS InterPro DOMAIN/s: Domain of unknown function XS
(InterPro:IPR005380); BEST Arabidopsis thaliana protein
match is: XS domain-containing protein / XS zinc finger
domain-containing protein-related (TAIR:AT5G23570.1); Has
565 Blast hits to 510 proteins in 121 species: Archae - 2;
Bacteria - 90; Metazoa - 191; Fungi - 32; Plants - 51;
Viruses - 4; Other Eukaryotes - 195 (source: NCBI BLink).
1 0.31 -0.32
2 AT5G57390 AINTEGUMENTA-like 5 AINTEGUMENTA-like 5, CHOTTO 1,
EMBRYOMAKER, PLETHORA 5
0.78 0.31 -0.3
3 AT3G05590 ribosomal protein L18 ribosomal protein L18 -0.76 0.3 -0.31
4 AT2G35605 SWIB/MDM2 domain superfamily protein -0.75 0.3 -0.32
5 AT1G77750 Ribosomal protein S13/S18 family -0.75 0.32 -0.32
6 AT1G76300 snRNP core protein SMD3 snRNP core protein SMD3 -0.74 0.3 -0.31
7 AT2G25490 EIN3-binding F box protein 1 EIN3-binding F box protein 1, FBL6 0.72 0.31 -0.29
8 AT5G22650 histone deacetylase 2B ARABIDOPSIS HISTONE DEACETYLASE 2,
ATHD2B, HISTONE DEACETYLASE 2,
histone deacetylase 2B, HDA4,
HDT02, HDT2
-0.72 0.31 -0.33
9 AT3G59650 mitochondrial ribosomal protein L51/S25/CI-B8 family
protein
-0.72 0.33 -0.28
10 AT2G19750 Ribosomal protein S30 family protein -0.71 0.3 -0.32
11 AT2G27840 histone deacetylase-related / HD-related HISTONE DEACETYLASE 13, HDT04,
HDT4
-0.71 0.31 -0.31
12 AT1G04190 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 3 -0.71 0.31 -0.33
13 AT2G45710 Zinc-binding ribosomal protein family protein -0.7 0.31 -0.3
14 AT2G27720 60S acidic ribosomal protein family -0.7 0.31 -0.31
15 AT1G14980 chaperonin 10 chaperonin 10 -0.7 0.31 -0.33
16 AT1G11240 CONTAINS InterPro DOMAIN/s: Nucleolar protein 12
(InterPro:IPR019186); Has 2484 Blast hits to 1934 proteins
in 262 species: Archae - 0; Bacteria - 90; Metazoa - 921;
Fungi - 378; Plants - 144; Viruses - 18; Other Eukaryotes -
933 (source: NCBI BLink).
-0.7 0.33 -0.3
17 AT5G50810 translocase inner membrane subunit 8 translocase inner membrane subunit
8
-0.7 0.3 -0.31
18 AT5G56940 Ribosomal protein S16 family protein -0.69 0.32 -0.31
19 AT2G18400 ribosomal protein L6 family protein -0.69 0.31 -0.31
20 AT1G20580 Small nuclear ribonucleoprotein family protein -0.69 0.34 -0.32
21 AT2G19740 Ribosomal protein L31e family protein -0.69 0.32 -0.29
22 AT3G27280 prohibitin 4 prohibitin 4, prohibitin 4 -0.68 0.31 -0.32
23 AT5G64090 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: plasma membrane;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Hyccin
(InterPro:IPR018619); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G21050.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
0.68 0.33 -0.33
24 AT2G29540 RNApolymerase 14 kDa subunit ATRPAC14, RNApolymerase 14 kDa
subunit, RNApolymerase 14 kDa
subunit
-0.68 0.32 -0.32
25 AT1G49410 translocase of the outer mitochondrial membrane 6 translocase of the outer
mitochondrial membrane 6
-0.68 0.34 -0.31
26 AT3G02820 zinc knuckle (CCHC-type) family protein -0.68 0.32 -0.32
27 AT5G47700 60S acidic ribosomal protein family -0.68 0.31 -0.31
28 AT1G07410 RAB GTPase homolog A2B ARABIDOPSIS RAB GTPASE HOMOLOG
A2B, RAB GTPase homolog A2B, RAB
GTPASE HOMOLOG A2B, RAB GTPase
homolog A2B
-0.68 0.32 -0.33
29 AT2G19720 ribosomal protein S15A B ribosomal protein S15A B -0.68 0.29 -0.31
30 AT1G07830 ribosomal protein L29 family protein -0.67 0.34 -0.33
31 AT4G30220 small nuclear ribonucleoprotein F small nuclear ribonucleoprotein F -0.67 0.3 -0.3
32 AT1G57620 emp24/gp25L/p24 family/GOLD family protein -0.67 0.32 -0.3
33 AT5G64650 Ribosomal protein L17 family protein -0.67 0.32 -0.31
34 AT2G39795 Mitochondrial glycoprotein family protein -0.67 0.31 -0.31
35 AT3G63180 TIC-like TICKLE, TIC-like 0.67 0.31 -0.31
36 AT4G36420 Ribosomal protein L12 family protein -0.66 0.31 -0.32
37 AT3G56070 rotamase cyclophilin 2 rotamase cyclophilin 2 -0.65 0.32 -0.34
38 AT1G16000 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G80890.1); Has 41 Blast hits
to 40 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
-0.65 0.32 -0.3
39 AT5G52410 CONTAINS InterPro DOMAIN/s: S-layer homology domain
(InterPro:IPR001119); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G23890.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).
0.65 0.34 -0.32
40 AT5G23290 prefoldin 5 prefoldin 5 -0.65 0.29 -0.31
41 AT5G08040 mitochondrial import receptor subunit TOM5 homolog mitochondrial import receptor
subunit TOM5 homolog
-0.65 0.33 -0.32
42 AT1G73940 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G49410.2); Has 54 Blast hits
to 54 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
-0.65 0.32 -0.33
43 AT1G26340 cytochrome B5 isoform A ARABIDOPSIS CYTOCHROME B5 ISOFORM
A, B5 #6, cytochrome B5 isoform A
-0.65 0.32 -0.31
44 AT2G34260 transducin family protein / WD-40 repeat family protein human WDR55 (WD40 repeat) homolog -0.65 0.3 -0.32
45 AT4G26180 Mitochondrial substrate carrier family protein 0.65 0.32 -0.28
46 AT4G30840 Transducin/WD40 repeat-like superfamily protein -0.65 0.32 -0.32
47 AT1G09910 Rhamnogalacturonate lyase family protein 0.65 0.34 -0.31
48 AT1G76460 RNA-binding (RRM/RBD/RNP motifs) family protein 0.64 0.32 -0.32
49 AT5G25520 SPOC domain / Transcription elongation factor S-II protein 0.64 0.3 -0.3
50 AT4G34040 RING/U-box superfamily protein 0.64 0.33 -0.32
51 AT3G61600 POZ/BTB containin G-protein 1 POZ/BTB containin G-protein 1,
POZ/BTB containin G-protein 1
0.64 0.34 -0.31
52 AT2G45910 U-box domain-containing protein kinase family protein 0.63 0.31 -0.3
53 AT1G15060 Uncharacterised conserved protein UCP031088, alpha/beta
hydrolase
0.62 0.31 -0.31
54 AT5G14540 Protein of unknown function (DUF1421) 0.62 0.31 -0.31
55 AT3G09850 D111/G-patch domain-containing protein 0.62 0.34 -0.32
56 AT5G18475 Pentatricopeptide repeat (PPR) superfamily protein 0.62 0.31 -0.31
57 AT5G04050 RNA-directed DNA polymerase (reverse transcriptase) 0.62 0.33 -0.31
58 AT2G48110 reduced epidermal fluorescence 4 MED33B, REDUCED EPIDERMAL
FLUORESCENCE 4
0.62 0.33 -0.3
59 AT5G66320 GATA transcription factor 5 GATA transcription factor 5 0.61 0.29 -0.32
60 AT1G24190 SIN3-like 3 ARABIDOPSIS THALIANA SIN3 HOMOLOG,
ARABIDOPSIS THALIANA SIN3 HOMOLOG,
SIN3-like 3
0.61 0.3 -0.3
61 AT1G09510 NAD(P)-binding Rossmann-fold superfamily protein 0.6 0.33 -0.33
62 AT1G02020 nitroreductase family protein 0.59 0.31 -0.3
63 AT5G04560 HhH-GPD base excision DNA repair family protein DEMETER 0.59 0.32 -0.3
64 AT2G35050 Protein kinase superfamily protein with
octicosapeptide/Phox/Bem1p domain
0.59 0.31 -0.29
65 AT4G18990 xyloglucan endotransglucosylase/hydrolase 29 xyloglucan
endotransglucosylase/hydrolase 29
0.59 0.29 -0.33
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
66 C0258 Tryptophan amide (NH3+) D,L-Tryptophan amide (NH3+) - - 0.73 0.45 -0.47