AT3G06530 : -
Query Information
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AGICode AT3G06530
Description ARM repeat superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G06530 ARM repeat superfamily protein 1 0.31 -0.31
2 AT1G79150 binding 0.91 0.33 -0.32
3 AT1G48920 nucleolin like 1 nucleolin like 1, nucleolin like
1, PARALLEL 1		 0.89 0.31 -0.32
4 AT3G57660 nuclear RNA polymerase A1 nuclear RNA polymerase A1 0.89 0.33 -0.31
5 AT1G29940 nuclear RNA polymerase A2 nuclear RNA polymerase A2 0.89 0.3 -0.31
6 AT3G11964 RNA binding;RNA binding 0.89 0.29 -0.33
7 AT1G69070 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Nop14-like protein (InterPro:IPR007276); Has 69842 Blast
hits to 35213 proteins in 1572 species: Archae - 363;
Bacteria - 20593; Metazoa - 20851; Fungi - 8010; Plants -
2912; Viruses - 517; Other Eukaryotes - 16596 (source: NCBI
BLink).		 0.88 0.32 -0.32
8 AT4G25730 FtsJ-like methyltransferase family protein 0.88 0.31 -0.3
9 AT2G34357 ARM repeat superfamily protein 0.88 0.35 -0.3
10 AT4G26600 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.88 0.33 -0.35
11 AT3G58660 Ribosomal protein L1p/L10e family 0.88 0.32 -0.32
12 AT5G64420 DNA polymerase V family 0.87 0.32 -0.32
13 AT2G40360 Transducin/WD40 repeat-like superfamily protein 0.87 0.29 -0.32
14 AT4G13750 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
family protein		 EMBRYO DEFECTIVE 2597, NO VEIN 0.86 0.31 -0.32
15 AT1G51380 DEA(D/H)-box RNA helicase family protein 0.86 0.33 -0.32
16 AT3G12270 protein arginine methyltransferase 3 ARABIDOPSIS THALIANA PROTEIN
ARGININE METHYLTRANSFERASE 3,
protein arginine methyltransferase
3		 0.86 0.33 -0.31
17 AT5G06110 DnaJ domain ;Myb-like DNA-binding domain 0.86 0.31 -0.33
18 AT3G07770 HEAT SHOCK PROTEIN 89.1 HEAT SHOCK PROTEIN 90-6, HEAT
SHOCK PROTEIN 90.6, HEAT SHOCK
PROTEIN 89.1		 0.85 0.31 -0.31
19 AT2G47990 transducin family protein / WD-40 repeat family protein EMBRYO SAC DEVELOPMENT ARREST 13,
EMBRYO SAC DEVELOPMENT ARREST 19,
SLOW WALKER1		 0.85 0.32 -0.31
20 AT2G40700 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.84 0.33 -0.32
21 AT1G29900 carbamoyl phosphate synthetase B carbamoyl phosphate synthetase B,
VENOSA 3		 0.84 0.31 -0.31
22 AT3G57940 Domain of unknown function (DUF1726) ;Putative ATPase
(DUF699)		 0.84 0.3 -0.32
23 AT4G04940 transducin family protein / WD-40 repeat family protein 0.84 0.3 -0.31
24 AT5G39840 ATP-dependent RNA helicase, mitochondrial, putative 0.84 0.31 -0.32
25 AT1G06720 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.84 0.3 -0.32
26 AT5G16750 Transducin family protein / WD-40 repeat family protein TORMOZEMBRYO DEFECTIVE 0.84 0.29 -0.3
27 AT3G24080 KRR1 family protein 0.84 0.32 -0.32
28 AT5G35910 Polynucleotidyl transferase, ribonuclease H fold protein
with HRDC domain		 0.84 0.31 -0.31
29 AT5G55920 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 OLIGOCELLULA 2 0.84 0.3 -0.3
30 AT1G10270 glutamine-rich protein 23 glutamine-rich protein 23 0.83 0.33 -0.31
31 AT3G02650 Tetratricopeptide repeat (TPR)-like superfamily protein 0.83 0.31 -0.3
32 AT1G15440 periodic tryptophan protein 2 (PERIODIC TRYPTOPHAN PROTEIN 2,
periodic tryptophan protein 2		 0.83 0.32 -0.32
33 AT5G42540 exoribonuclease 2 EXORIBONUCLEASE 2, exoribonuclease
2		 0.83 0.32 -0.31
34 AT1G79490 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 2217 0.83 0.33 -0.31
35 AT4G30990 ARM repeat superfamily protein 0.83 0.33 -0.33
36 AT3G16810 pumilio 24 pumilio 24, pumilio 24 0.83 0.31 -0.3
37 AT3G07660 Kinase-related protein of unknown function (DUF1296) 0.83 0.31 -0.33
38 AT4G02400 U3 ribonucleoprotein (Utp) family protein 0.83 0.32 -0.32
39 AT4G05410 Transducin/WD40 repeat-like superfamily protein YAOZHE 0.83 0.3 -0.31
40 AT5G20600 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA
processing; LOCATED IN: preribosome, small subunit
precursor; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Nucleolar, Nop52 (InterPro:IPR010301); Has 543 Blast hits
to 530 proteins in 201 species: Archae - 0; Bacteria - 10;
Metazoa - 211; Fungi - 164; Plants - 46; Viruses - 0; Other
Eukaryotes - 112 (source: NCBI BLink).		 0.83 0.32 -0.31
41 AT4G27010 CONTAINS InterPro DOMAIN/s: Ribosome 60S biogenesis
N-terminal (InterPro:IPR021714); BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT1G72270.1); Has
30201 Blast hits to 17322 proteins in 780 species: Archae -
12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants
- 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 EMBRYO DEFECTIVE 2788 0.82 0.32 -0.32
42 AT2G18220 Noc2p family 0.82 0.31 -0.32
43 AT3G52140 tetratricopeptide repeat (TPR)-containing protein 0.82 0.35 -0.32
44 AT4G10620 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.82 0.31 -0.33
45 AT2G18900 Transducin/WD40 repeat-like superfamily protein 0.82 0.32 -0.31
46 AT3G55510 Noc2p family REBELOTE 0.82 0.32 -0.3
47 AT5G59980 Polymerase/histidinol phosphatase-like 0.81 0.32 -0.3
48 AT3G07050 GTP-binding family protein nucleostemin-like 1 0.81 0.33 -0.3
49 AT1G10490 Domain of unknown function (DUF1726) ;Putative ATPase
(DUF699)		 0.81 0.32 -0.31
50 AT2G17250 CCAAT-binding factor EMBRYO DEFECTIVE 2762 0.81 0.32 -0.31
51 AT1G06900 Insulinase (Peptidase family M16) family protein 0.81 0.31 -0.3
52 AT1G52160 tRNAse Z3 tRNAse Z3 0.81 0.32 -0.32
53 AT4G23540 ARM repeat superfamily protein 0.81 0.31 -0.31
54 AT4G12750 Homeodomain-like transcriptional regulator 0.8 0.33 -0.31
55 AT2G43650 Sas10/U3 ribonucleoprotein (Utp) family protein EMBRYO DEFECTIVE 2777 0.8 0.32 -0.33
56 AT5G17270 Protein prenylyltransferase superfamily protein 0.8 0.29 -0.32
57 AT5G09840 Putative endonuclease or glycosyl hydrolase 0.8 0.3 -0.32
58 AT3G49240 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 1796 0.8 0.33 -0.34
59 AT1G31970 DEA(D/H)-box RNA helicase family protein STRESS RESPONSE SUPPRESSOR 1 0.8 0.32 -0.32
60 AT3G22660 rRNA processing protein-related 0.8 0.3 -0.32
61 AT1G14610 valyl-tRNA synthetase / valine--tRNA ligase (VALRS) TWIN 2, VALYL TRNA SYNTHETASE 0.8 0.32 -0.3
62 AT5G43850 RmlC-like cupins superfamily protein ARD4, ATARD4 -0.79 0.35 -0.31
63 AT1G60850 DNA-directed RNA polymerase family protein AAC42, ATRPAC42 0.79 0.34 -0.31
64 AT1G76810 eukaryotic translation initiation factor 2 (eIF-2) family
protein		 0.79 0.31 -0.33
65 AT5G54910 DEA(D/H)-box RNA helicase family protein 0.79 0.28 -0.31
66 AT1G71850 Ubiquitin carboxyl-terminal hydrolase family protein 0.79 0.31 -0.31
67 AT1G79150 binding 0.79 0.32 -0.3
68 AT5G67240 small RNA degrading nuclease 3 small RNA degrading nuclease 3 0.79 0.31 -0.3
69 AT5G45140 nuclear RNA polymerase C2 nuclear RNA polymerase C2 0.79 0.32 -0.31
70 AT5G19820 ARM repeat superfamily protein embryo defective 2734 0.79 0.31 -0.34
71 AT5G06550 CONTAINS InterPro DOMAIN/s: Transcription factor
jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347),
F-box domain, Skp2-like (InterPro:IPR022364), Transcription
factor jumonji (InterPro:IPR013129); BEST Arabidopsis
thaliana protein match is: transferases, transferring
glycosyl groups (TAIR:AT1G78280.1); Has 1762 Blast hits to
1747 proteins in 292 species: Archae - 0; Bacteria - 297;
Metazoa - 877; Fungi - 168; Plants - 221; Viruses - 0;
Other Eukaryotes - 199 (source: NCBI BLink).		 0.79 0.32 -0.32
72 AT1G03530 nuclear assembly factor 1 ATNAF1, nuclear assembly factor 1 0.78 0.31 -0.33
73 AT4G31160 DDB1-CUL4 associated factor 1 DDB1-CUL4 associated factor 1 0.78 0.34 -0.3
74 AT2G21440 RNA-binding (RRM/RBD/RNP motifs) family protein 0.78 0.33 -0.3
75 AT5G14580 polyribonucleotide nucleotidyltransferase, putative 0.78 0.29 -0.31
76 AT1G42440 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
ribosome biogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: AARP2CN (InterPro:IPR012948),
Protein of unknown function DUF663 (InterPro:IPR007034);
BEST Arabidopsis thaliana protein match is: P-loop
containing nucleoside triphosphate hydrolases superfamily
protein (TAIR:AT1G06720.1); Has 2741 Blast hits to 2088
proteins in 291 species: Archae - 2; Bacteria - 131;
Metazoa - 833; Fungi - 650; Plants - 171; Viruses - 49;
Other Eukaryotes - 905 (source: NCBI BLink).		 0.78 0.33 -0.33
77 AT5G09420 translocon at the outer membrane of chloroplasts 64-V AtmtOM64, translocon at the outer
membrane of chloroplasts 64-V,
ARABIDOPSIS THALIANA TRANSLOCON AT
THE OUTER MEMBRANE OF CHLOROPLASTS
64-V, outer membrane 64,
translocon at the outer membrane
of chloroplasts 64-V		 0.78 0.31 -0.32
78 AT1G63810 CONTAINS InterPro DOMAIN/s: Nrap protein
(InterPro:IPR005554); Has 396 Blast hits to 382 proteins in
182 species: Archae - 3; Bacteria - 2; Metazoa - 142; Fungi
- 146; Plants - 43; Viruses - 0; Other Eukaryotes - 60
(source: NCBI BLink).		 0.77 0.31 -0.32
79 AT3G57150 homologue of NAP57 AtCBF5, AtNAP57, CBF5, homologue
of NAP57		 0.77 0.31 -0.31
80 AT1G19520 pentatricopeptide (PPR) repeat-containing protein NUCLEAR FUSION DEFECTIVE 5 0.77 0.29 -0.33
81 AT1G03830 guanylate-binding family protein 0.77 0.32 -0.32
82 AT5G40480 embryo defective 3012 embryo defective 3012 0.77 0.32 -0.33
83 AT1G68990 male gametophyte defective 3 male gametophyte defective 3 0.77 0.31 -0.32
84 AT1G30240 FUNCTIONS IN: binding; INVOLVED IN: biological_process
unknown; LOCATED IN: cellular_component unknown; EXPRESSED
IN: 21 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold
(InterPro:IPR016024); Has 165 Blast hits to 164 proteins in
73 species: Archae - 0; Bacteria - 0; Metazoa - 47; Fungi -
68; Plants - 46; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.77 0.31 -0.29
85 AT5G22320 Leucine-rich repeat (LRR) family protein 0.77 0.33 -0.3
86 AT4G25340 FK506 BINDING PROTEIN 53 ATFKBP53, FK506 BINDING PROTEIN 53 0.77 0.34 -0.32
87 AT3G21540 transducin family protein / WD-40 repeat family protein 0.77 0.31 -0.32
88 AT2G18330 AAA-type ATPase family protein 0.76 0.31 -0.3
89 AT4G16520 Ubiquitin-like superfamily protein autophagy 8f -0.76 0.33 -0.32
90 AT3G13150 Tetratricopeptide repeat (TPR)-like superfamily protein 0.76 0.32 -0.32
91 AT5G60730 Anion-transporting ATPase 0.76 0.3 -0.32
92 AT1G64600 methyltransferases;copper ion binding 0.76 0.34 -0.32
93 AT1G62040 Ubiquitin-like superfamily protein autophagy 8c -0.76 0.29 -0.32
94 AT5G15550 Transducin/WD40 repeat-like superfamily protein 0.76 0.31 -0.33
95 AT1G04945 HIT-type Zinc finger family protein 0.76 0.29 -0.31
96 AT3G18640 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.76 0.34 -0.34
97 AT4G04670 Met-10+ like family protein / kelch repeat-containing
protein		 0.76 0.33 -0.32
98 AT1G16480 Tetratricopeptide repeat (TPR)-like superfamily protein 0.76 0.32 -0.31
99 AT1G30960 GTP-binding family protein 0.76 0.31 -0.33
100 AT1G53200 unknown protein; Has 21 Blast hits to 21 proteins in 9
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.76 0.33 -0.31
101 AT4G38090 Ribosomal protein S5 domain 2-like superfamily protein -0.75 0.34 -0.33
102 AT1G31170 sulfiredoxin SULFIREDOXIN, sulfiredoxin -0.74 0.32 -0.3
103 AT1G48420 D-cysteine desulfhydrase 1-AMINOCYCLOPROPANE-1-CARBOXYLIC
ACID DEAMINASE 1, A. THALIANA
1-AMINOCYCLOPROPANE-1-CARBOXYLIC
ACID DEAMINASE 1, D-cysteine
desulfhydrase, D-cysteine
desulfhydrase		 -0.73 0.31 -0.33
104 AT2G40410 Staphylococcal nuclease homologue -0.73 0.33 -0.32
105 AT5G37680 ADP-ribosylation factor-like A1A ADP-ribosylation factor-like A1A,
ADP-ribosylation factor-like A1A		 -0.73 0.32 -0.32
106 AT2G36360 Galactose oxidase/kelch repeat superfamily protein -0.71 0.34 -0.32
107 AT5G19590 Protein of unknown function, DUF538 -0.71 0.31 -0.31
108 AT1G55000 peptidoglycan-binding LysM domain-containing protein -0.71 0.32 -0.32
109 AT5G02790 Glutathione S-transferase family protein Glutathione transferase L3 -0.7 0.31 -0.31
110 AT1G23130 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.7 0.31 -0.33
111 AT4G14930 Survival protein SurE-like phosphatase/nucleotidase -0.7 0.33 -0.31
112 AT2G39000 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.69 0.33 -0.3
113 AT1G08110 lactoylglutathione lyase family protein / glyoxalase I
family protein		 -0.69 0.31 -0.33
114 AT1G80180 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 10 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G15400.3); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.69 0.31 -0.32
115 AT3G60340 alpha/beta-Hydrolases superfamily protein -0.68 0.34 -0.33
116 AT3G03150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G17165.1); Has 39 Blast
hits to 39 proteins in 11 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.68 0.32 -0.31
117 AT4G01026 PYR1-like 7 PYR1-like 7, regulatory components
of ABA receptor 2		 -0.68 0.33 -0.34
118 AT2G23780 RING/U-box superfamily protein -0.68 0.31 -0.3
119 AT1G47330 CBS domain-containing protein with a domain of unknown
function (DUF21)		 -0.67 0.31 -0.32
120 AT1G33780 Protein of unknown function (DUF179) -0.67 0.32 -0.29
121 AT4G00355 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G45980.1); Has 100 Blast hits
to 97 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 ATG8-interacting protein 2 -0.66 0.31 -0.29
122 AT4G01900 GLNB1 homolog GLNB1 homolog, PII -0.66 0.32 -0.34
123 AT1G77930 Chaperone DnaJ-domain superfamily protein -0.66 0.3 -0.32
124 AT2G41430 dehydration-induced protein (ERD15) CTC-Interacting Domain 1, EARLY
RESPONSIVE TO DEHYDRATION 15,
LIGHT STRESS-REGULATED 1		 -0.66 0.3 -0.32
125 AT2G38820 Protein of unknown function (DUF506) -0.65 0.31 -0.31
126 AT5G43830 Aluminium induced protein with YGL and LRDR motifs -0.65 0.32 -0.31
127 AT4G31270 sequence-specific DNA binding transcription factors -0.65 0.3 -0.31
128 AT4G14500 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.65 0.3 -0.31
129 AT5G16120 alpha/beta-Hydrolases superfamily protein -0.65 0.31 -0.31
130 AT4G29420 F-box/RNI-like superfamily protein -0.65 0.32 -0.33
131 AT3G15353 metallothionein 3 ATMT3, metallothionein 3 -0.65 0.32 -0.28
132 AT1G53060 Legume lectin family protein -0.65 0.33 -0.32
133 AT1G66890 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
50S ribosomal protein-related (TAIR:AT5G16200.1); Has 36
Blast hits to 36 proteins in 7 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.64 0.33 -0.32
134 AT3G09600 Homeodomain-like superfamily protein LHY-CCA1-LIKE5, REVEILLE 8 -0.64 0.33 -0.33
135 AT5G12310 RING/U-box superfamily protein -0.64 0.33 -0.32
136 AT1G23960 Protein of unknown function (DUF626) -0.64 0.29 -0.32
137 AT1G19000 Homeodomain-like superfamily protein -0.63 0.29 -0.33
138 AT3G18295 Protein of unknown function (DUF1639) -0.63 0.33 -0.33
139 AT2G38710 AMMECR1 family -0.63 0.31 -0.3
140 AT5G23460 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.62 0.31 -0.3
141 AT5G62610 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.62 0.31 -0.32
142 AT5G48810 cytochrome B5 isoform D ATB5-B, ARABIDOPSIS CYTOCHROME B5
ISOFORM D, B5 #3, cytochrome B5
isoform D		 -0.61 0.31 -0.31
143 AT2G21185 unknown protein; Has 9 Blast hits to 9 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.61 0.32 -0.32
144 AT5G10870 chorismate mutase 2 chorismate mutase 2, chorismate
mutase 2		 -0.61 0.29 -0.31
145 AT3G59940 Galactose oxidase/kelch repeat superfamily protein -0.61 0.32 -0.32
146 AT1G56280 drought-induced 19 drought-induced 19,
drought-induced 19		 -0.61 0.33 -0.34
147 AT3G22250 UDP-Glycosyltransferase superfamily protein -0.61 0.31 -0.31
148 AT5G10960 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 -0.61 0.31 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
149 C0173 MST_2301.7 - - - 0.76 0.46 -0.45