AT3G04480 : -
Query Information
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AGICode AT3G04480
Description endoribonucleases
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G04480 endoribonucleases 1 0.33 -0.32
2 AT1G70480 Domain of unknown function (DUF220) -0.85 0.3 -0.33
3 AT2G17700 ACT-like protein tyrosine kinase family protein serine/threonine/tyrosine kinase 8 -0.83 0.29 -0.31
4 AT3G15580 Ubiquitin-like superfamily protein AUTOPHAGY 8H, AUTOPHAGY 8I -0.83 0.31 -0.32
5 AT2G18480 Major facilitator superfamily protein -0.82 0.31 -0.32
6 AT3G46000 actin depolymerizing factor 2 actin depolymerizing factor 2 -0.82 0.3 -0.3
7 AT4G23290 cysteine-rich RLK (RECEPTOR-like protein kinase) 21 cysteine-rich RLK (RECEPTOR-like
protein kinase) 21		 0.82 0.28 -0.31
8 AT4G32250 Protein kinase superfamily protein -0.81 0.32 -0.31
9 AT5G54870 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G27020.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.81 0.34 -0.32
10 AT3G45160 Putative membrane lipoprotein 0.81 0.31 -0.34
11 AT3G55070 LisH/CRA/RING-U-box domains-containing protein -0.8 0.33 -0.29
12 AT5G44900 Toll-Interleukin-Resistance (TIR) domain family protein 0.8 0.32 -0.31
13 AT2G37860 Protein of unknown function (DUF3411) LOWER CELL DENSITY 1 0.8 0.31 -0.33
14 AT1G02970 WEE1 kinase homolog ATWEE1, WEE1 kinase homolog 0.8 0.3 -0.31
15 AT2G39050 hydroxyproline-rich glycoprotein family protein ArathEULS3, Euonymus lectin S3 -0.79 0.29 -0.31
16 AT5G52890 AT hook motif-containing protein 0.79 0.3 -0.33
17 AT2G38170 cation exchanger 1 ATCAX1, cation exchanger 1, RARE
COLD INDUCIBLE 4		 0.79 0.33 -0.32
18 AT2G41560 autoinhibited Ca(2+)-ATPase, isoform 4 autoinhibited Ca(2+)-ATPase,
isoform 4		 0.79 0.29 -0.31
19 AT1G13195 RING/U-box superfamily protein -0.79 0.34 -0.32
20 AT3G20240 Mitochondrial substrate carrier family protein 0.79 0.29 -0.31
21 AT1G61580 R-protein L3 B ARABIDOPSIS RIBOSOMAL PROTEIN 2,
R-protein L3 B		 0.78 0.31 -0.32
22 AT1G23060 BEST Arabidopsis thaliana protein match is: TPX2 (targeting
protein for Xklp2) protein family (TAIR:AT1G70950.1); Has
449 Blast hits to 419 proteins in 98 species: Archae - 0;
Bacteria - 40; Metazoa - 139; Fungi - 21; Plants - 158;
Viruses - 3; Other Eukaryotes - 88 (source: NCBI BLink).		 -0.78 0.34 -0.33
23 AT1G50940 electron transfer flavoprotein alpha electron transfer flavoprotein
alpha		 -0.78 0.32 -0.32
24 AT5G14610 DEAD box RNA helicase family protein 0.78 0.31 -0.3
25 AT3G58470 nucleic acid binding;methyltransferases 0.77 0.34 -0.3
26 AT1G13790 XH/XS domain-containing protein factor of DNA methylation 4 0.77 0.33 -0.31
27 AT1G01710 Acyl-CoA thioesterase family protein -0.77 0.32 -0.32
28 AT1G19640 jasmonic acid carboxyl methyltransferase jasmonic acid carboxyl
methyltransferase		 -0.77 0.29 -0.32
29 AT5G27440 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: shoot apex, shoot, flower, seed;
EXPRESSED DURING: petal differentiation and expansion
stage, E expanded cotyledon stage; Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.77 0.32 -0.32
30 AT4G36040 Chaperone DnaJ-domain superfamily protein DnaJ11 -0.77 0.32 -0.31
31 AT4G35440 chloride channel E ATCLC-E, chloride channel E,
CHLORIDE CHANNEL E		 0.77 0.31 -0.32
32 AT5G65860 ankyrin repeat family protein 0.77 0.31 -0.31
33 AT5G48020 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.76 0.34 -0.3
34 AT2G26230 uricase / urate oxidase / nodulin 35, putative -0.76 0.31 -0.3
35 AT3G48760 DHHC-type zinc finger family protein -0.76 0.32 -0.31
36 AT3G14050 RELA/SPOT homolog 2 RELA-SPOT HOMOLOG 2, RELA/SPOT
HOMOLOG 2, RELA/SPOT homolog 2		 -0.76 0.32 -0.29
37 AT5G27910 nuclear factor Y, subunit C8 nuclear factor Y, subunit C8 0.76 0.32 -0.31
38 AT4G18140 SCP1-like small phosphatase 4b SCP1-like small phosphatase 4b -0.76 0.3 -0.31
39 AT2G14620 xyloglucan endotransglucosylase/hydrolase 10 xyloglucan
endotransglucosylase/hydrolase 10		 -0.76 0.31 -0.31
40 AT4G30490 AFG1-like ATPase family protein -0.76 0.32 -0.32
41 AT1G60610 SBP (S-ribonuclease binding protein) family protein -0.76 0.32 -0.31
42 AT1G73080 PEP1 receptor 1 PEP1 RECEPTOR 1, PEP1 receptor 1 -0.76 0.29 -0.3
43 AT4G37540 LOB domain-containing protein 39 LOB domain-containing protein 39 0.76 0.35 -0.32
44 AT1G68910 WPP domain-interacting protein 2 WPP domain-interacting protein 2 -0.76 0.33 -0.34
45 AT3G51895 sulfate transporter 3;1 AST12, sulfate transporter 3;1 -0.76 0.3 -0.31
46 AT1G68820 Transmembrane Fragile-X-F-associated protein -0.75 0.3 -0.33
47 AT1G49300 RAB GTPase homolog G3E ARABIDOPSIS RAB GTPASE HOMOLOG 7,
ARABIDOPSIS RAB GTPASE HOMOLOG
G3E, RAB GTPase homolog G3E		 -0.75 0.32 -0.31
48 AT4G13270 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.75 0.3 -0.31
49 AT1G61390 S-locus lectin protein kinase family protein 0.75 0.33 -0.3
50 AT5G24800 basic leucine zipper 9 ARABIDOPSIS THALIANA BASIC LEUCINE
ZIPPER 9, basic leucine zipper 9,
BASIC LEUCINE ZIPPER O2 HOMOLOG 2		 -0.75 0.3 -0.32
51 AT1G65490 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G65486.1); Has 23 Blast hits to 23 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.75 0.31 -0.3
52 AT2G26050 Protein of unknown function (DUF1644) 0.75 0.31 -0.31
53 AT1G54130 RELA/SPOT homolog 3 AT-RSH3, RELA/SPOT HOMOLOG 3,
RELA/SPOT homolog 3		 -0.75 0.32 -0.31
54 AT4G15100 serine carboxypeptidase-like 30 serine carboxypeptidase-like 30 -0.74 0.32 -0.31
55 AT5G03660 Family of unknown function (DUF662) -0.74 0.31 -0.31
56 AT2G41040 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.74 0.31 -0.31
57 AT5G16830 syntaxin of plants 21 ATPEP12, ATSYP21, PEP12, PEP12P,
syntaxin of plants 21		 -0.74 0.34 -0.3
58 AT1G08920 ERD (early response to dehydration) six-like 1 ERD (early response to
dehydration) six-like 1		 -0.74 0.31 -0.33
59 AT3G62430 Protein with RNI-like/FBD-like domains 0.74 0.34 -0.31
60 AT3G62770 Transducin/WD40 repeat-like superfamily protein autophagy 18a, autophagy 18a -0.74 0.31 -0.32
61 AT1G76130 alpha-amylase-like 2 alpha-amylase-like 2, ARABIDOPSIS
THALIANA ALPHA-AMYLASE-LIKE 2		 -0.74 0.33 -0.33
62 AT3G58560 DNAse I-like superfamily protein 0.74 0.31 -0.31
63 AT3G06490 myb domain protein 108 myb domain protein 108,
BOTRYTIS-SUSCEPTIBLE1, myb domain
protein 108		 -0.74 0.31 -0.33
64 AT5G41560 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin
ligase, Det1/DDB1-complexing (InterPro:IPR018276); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.74 0.33 -0.31
65 AT4G27990 YGGT family protein ATYLMG1-2, YLMG1-2 -0.74 0.3 -0.33
66 AT5G65880 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.74 0.32 -0.34
67 AT1G26540 Agenet domain-containing protein 0.74 0.31 -0.34
68 AT3G59550 Rad21/Rec8-like family protein SISTER CHROMATID COHESION 1
PROTEIN 3, ATSYN3, SYN3		 0.74 0.36 -0.31
69 AT2G27830 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G22758.1); Has 131 Blast hits
to 131 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 131; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.74 0.32 -0.34
70 AT2G47710 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.73 0.3 -0.32
71 AT1G24280 glucose-6-phosphate dehydrogenase 3 glucose-6-phosphate dehydrogenase
3		 0.73 0.32 -0.3
72 AT3G21700 Ras-related small GTP-binding family protein ATSGP2, SGP2 -0.73 0.31 -0.32
73 AT3G06420 Ubiquitin-like superfamily protein autophagy 8h -0.73 0.3 -0.3
74 AT1G49910 Transducin/WD40 repeat-like superfamily protein BUB (BUDDING UNINHIBITED BY
BENZYMIDAZOL) 3.2		 0.73 0.32 -0.34
75 AT2G40060 Clathrin light chain protein clathrin light chain 2 -0.73 0.32 -0.31
76 AT3G43230 RING/FYVE/PHD-type zinc finger family protein -0.73 0.3 -0.31
77 AT2G26800 Aldolase superfamily protein -0.73 0.32 -0.32
78 AT5G47730 Sec14p-like phosphatidylinositol transfer family protein -0.73 0.32 -0.32
79 AT3G51130 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0183
(InterPro:IPR005373); Has 269 Blast hits to 265 proteins in
123 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi
- 82; Plants - 37; Viruses - 0; Other Eukaryotes - 19
(source: NCBI BLink).		 -0.73 0.33 -0.31
80 AT4G23300 cysteine-rich RLK (RECEPTOR-like protein kinase) 22 cysteine-rich RLK (RECEPTOR-like
protein kinase) 22		 0.73 0.31 -0.29
81 AT2G44130 Galactose oxidase/kelch repeat superfamily protein -0.73 0.33 -0.31
82 AT1G54710 homolog of yeast autophagy 18 (ATG18) H homolog of yeast autophagy 18
(ATG18) H, homolog of yeast
autophagy 18 (ATG18) H		 -0.72 0.3 -0.3
83 AT4G22340 cytidinediphosphate diacylglycerol synthase 2 cytidinediphosphate diacylglycerol
synthase 2		 -0.72 0.32 -0.31
84 AT1G78210 alpha/beta-Hydrolases superfamily protein -0.72 0.31 -0.33
85 AT1G71890 Major facilitator superfamily protein SUCROSE-PROTON SYMPORTER 5, SUC5 0.72 0.34 -0.31
86 AT1G80050 adenine phosphoribosyl transferase 2 adenine phosphoribosyl transferase
2, ATAPT2, PHT1.1		 0.72 0.32 -0.34
87 AT5G02530 RNA-binding (RRM/RBD/RNP motifs) family protein 0.72 0.32 -0.33
88 AT5G48180 nitrile specifier protein 5 nitrile specifier protein 5 -0.72 0.31 -0.32
89 AT4G07390 Mannose-P-dolichol utilization defect 1 protein -0.72 0.32 -0.31
90 AT3G63050 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G48075.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.72 0.32 -0.32
91 AT5G63450 cytochrome P450, family 94, subfamily B, polypeptide 1 cytochrome P450, family 94,
subfamily B, polypeptide 1		 -0.72 0.31 -0.33
92 AT4G34950 Major facilitator superfamily protein 0.72 0.31 -0.31
93 AT1G11070 BEST Arabidopsis thaliana protein match is:
Hydroxyproline-rich glycoprotein family protein
(TAIR:AT1G61080.1); Has 579 Blast hits to 567 proteins in
152 species: Archae - 0; Bacteria - 68; Metazoa - 159;
Fungi - 113; Plants - 172; Viruses - 0; Other Eukaryotes -
67 (source: NCBI BLink).		 0.72 0.32 -0.34
94 AT1G76490 hydroxy methylglutaryl CoA reductase 1 AtHMGR1, hydroxy methylglutaryl
CoA reductase 1,
3-HYDROXY-3-METHYLGLUTARYL COA
REDUCTASE 1		 -0.72 0.31 -0.32
95 AT2G28050 Pentatricopeptide repeat (PPR) superfamily protein 0.72 0.31 -0.33
96 AT4G15470 Bax inhibitor-1 family protein -0.71 0.31 -0.33
97 AT1G77770 Protein of unknown function (DUF1644) -0.71 0.33 -0.32
98 AT2G21560 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G39190.1); Has 3685 Blast hits
to 2305 proteins in 270 species: Archae - 0; Bacteria -
156; Metazoa - 1145; Fungi - 322; Plants - 177; Viruses -
6; Other Eukaryotes - 1879 (source: NCBI BLink).		 -0.71 0.32 -0.31
99 AT3G29350 histidine-containing phosphotransmitter 2 histidine-containing
phosphotransmitter 2		 -0.71 0.3 -0.31
100 AT3G10370 FAD-dependent oxidoreductase family protein SUGAR-DEPENDENT 6 -0.71 0.33 -0.31
101 AT3G05400 Major facilitator superfamily protein -0.71 0.33 -0.34
102 AT2G20920 Protein of unknown function (DUF3353) -0.71 0.32 -0.32
103 AT3G18630 uracil dna glycosylase uracil dna glycosylase, uracil dna
glycosylase		 0.71 0.31 -0.31
104 AT1G50020 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN:
24 plant structures; EXPRESSED DURING: 15 growth stages;
Has 72 Blast hits to 72 proteins in 27 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.71 0.29 -0.32
105 AT2G37570 HSP20-like chaperones superfamily protein sodium- and lithium-tolerant 1 -0.71 0.31 -0.32
106 AT1G72710 casein kinase 1-like protein 2 casein kinase 1-like protein 2 -0.71 0.31 -0.33
107 AT2G17990 BEST Arabidopsis thaliana protein match is:
kinectin-related (TAIR:AT5G66250.3); Has 7578 Blast hits to
6129 proteins in 783 species: Archae - 220; Bacteria -
1045; Metazoa - 3605; Fungi - 575; Plants - 442; Viruses -
38; Other Eukaryotes - 1653 (source: NCBI BLink).		 -0.71 0.31 -0.31
108 AT3G05740 RECQ helicase l1 RECQ helicase l1 0.71 0.33 -0.32
109 AT2G05630 Ubiquitin-like superfamily protein ATG8D -0.71 0.32 -0.28
110 AT5G03460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.71 0.31 -0.32
111 AT4G11570 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.71 0.29 -0.34
112 AT4G21810 DERLIN-2.1 DERLIN-2.1 -0.71 0.31 -0.31
113 AT5G16730 Plant protein of unknown function (DUF827) -0.71 0.28 -0.32
114 AT5G06370 NC domain-containing protein-related -0.71 0.32 -0.31
115 AT3G16650 Transducin/WD40 repeat-like superfamily protein 0.7 0.33 -0.33
116 AT2G47750 putative indole-3-acetic acid-amido synthetase GH3.9 putative indole-3-acetic
acid-amido synthetase GH3.9		 0.7 0.29 -0.32
117 AT3G26050 TPX2 (targeting protein for Xklp2) protein family 0.7 0.32 -0.35
118 AT4G02390 poly(ADP-ribose) polymerase poly(ADP-ribose) polymerase,
ATPARP1, POLY(ADP-RIBOSE)
POLYMERASE 1, poly(ADP-ribose)
polymerase		 0.7 0.3 -0.32
119 AT4G32800 Integrase-type DNA-binding superfamily protein 0.7 0.32 -0.3
120 AT2G35600 BREVIS RADIX-like 1 ARABIDOPSIS THALIANA BREVIS RADIX
LIKE 1, BREVIS RADIX-like 1		 0.7 0.32 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
121 C0190 O-acetyl-L-Serine - O-acetyl-L-Serine cysteine biosynthesis I,
seleno-amino acid biosynthesis 		-0.8 0.46 -0.42 C0190