AT3G05670 : -
Query Information
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AGICode AT3G05670
Description RING/U-box protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G05670 RING/U-box protein 1 0.33 -0.31
2 AT4G29790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G19390.1); Has 538 Blast hits
to 357 proteins in 124 species: Archae - 0; Bacteria - 74;
Metazoa - 109; Fungi - 58; Plants - 105; Viruses - 2; Other
Eukaryotes - 190 (source: NCBI BLink).		 0.76 0.3 -0.34
3 AT2G26780 ARM repeat superfamily protein 0.76 0.32 -0.31
4 AT3G14720 MAP kinase 19 ARABIDOPSIS THALIANA MAP KINASE
19, MAP kinase 19		 0.75 0.32 -0.31
5 AT3G07800 Thymidine kinase -0.74 0.3 -0.32
6 AT1G72700 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 0.73 0.32 -0.32
7 AT5G44210 erf domain protein 9 ERF DOMAIN PROTEIN- 9, ERF DOMAIN
PROTEIN 9, erf domain protein 9		 -0.71 0.31 -0.3
8 AT2G35630 ARM repeat superfamily protein GEM1, MICROTUBULE ORGANIZATION 1 0.7 0.3 -0.31
9 AT4G36660 Protein of unknown function (DUF1195) -0.7 0.29 -0.32
10 AT4G17140 pleckstrin homology (PH) domain-containing protein 0.69 0.32 -0.3
11 AT5G49930 zinc knuckle (CCHC-type) family protein embryo defective 1441 0.69 0.32 -0.31
12 AT1G50030 target of rapamycin target of rapamycin 0.69 0.31 -0.3
13 AT5G48400 Glutamate receptor family protein ATGLR1.2, GLUTAMATE RECEPTOR 1.2 0.68 0.33 -0.32
14 AT4G17890 ARF-GAP domain 8 ARF-GAP domain 8 -0.68 0.32 -0.32
15 AT1G30490 Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein		 ATHB9, PHAVOLUTA 0.68 0.31 -0.31
16 AT2G44060 Late embryogenesis abundant protein, group 2 -0.68 0.31 -0.32
17 AT2G44360 unknown protein; Has 23 Blast hits to 23 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.68 0.3 -0.31
18 AT5G55600 agenet domain-containing protein / bromo-adjacent homology
(BAH) domain-containing protein		 0.68 0.32 -0.34
19 AT2G03140 alpha/beta-Hydrolases superfamily protein 0.67 0.32 -0.35
20 AT1G09730 Cysteine proteinases superfamily protein 0.67 0.32 -0.34
21 AT2G28320 Pleckstrin homology (PH) and lipid-binding START
domains-containing protein		 0.67 0.33 -0.32
22 AT5G55040 DNA-binding bromodomain-containing protein 0.67 0.32 -0.31
23 AT2G44570 glycosyl hydrolase 9B12 glycosyl hydrolase 9B12, glycosyl
hydrolase 9B12		 -0.66 0.32 -0.29
24 AT1G48360 zinc ion binding;nucleic acid binding;hydrolases, acting on
acid anhydrides, in phosphorus-containing anhydrides		 0.66 0.29 -0.33
25 AT4G29830 Transducin/WD40 repeat-like superfamily protein vernalization independence 3 -0.66 0.31 -0.3
26 AT3G02260 auxin transport protein (BIG) ATTENUATED SHADE AVOIDANCE 1, BIG,
CORYMBOSA1, DARK OVER-EXPRESSION
OF CAB 1, LOW PHOSPHATE-RESISTANT
ROOT 1, TRANSPORT INHIBITOR
RESPONSE 3, UMBRELLA 1		 0.66 0.3 -0.32
27 AT5G41100 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: plasma membrane;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
hydroxyproline-rich glycoprotein family protein
(TAIR:AT3G26910.2); Has 1503 Blast hits to 1197 proteins in
220 species: Archae - 4; Bacteria - 108; Metazoa - 481;
Fungi - 318; Plants - 186; Viruses - 39; Other Eukaryotes -
367 (source: NCBI BLink).		 0.66 0.33 -0.32
28 AT2G47320 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 -0.66 0.32 -0.32
29 AT3G54230 suppressor of abi3-5 suppressor of abi3-5 0.65 0.33 -0.32
30 AT2G25850 poly(A) polymerase 2 poly(A) polymerase 2 0.65 0.32 -0.3
31 AT5G54160 O-methyltransferase 1 O-methyltransferase 1,
O-methyltransferase 1		 -0.65 0.31 -0.32
32 AT2G32250 FAR1-related sequence 2 FAR1-related sequence 2 0.65 0.34 -0.33
33 AT2G16600 rotamase CYP 3 rotamase CYP 3 -0.65 0.32 -0.3
34 AT1G35620 PDI-like 5-2 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 8, PDI-like
5-2, PROTEIN DISULFIDE ISOMERASE
8, PDI-like 5-2		 -0.65 0.32 -0.33
35 AT5G53440 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 0.65 0.32 -0.29
36 AT3G14570 glucan synthase-like 4 glucan synthase-like 4, atgsl4,
gsl04, glucan synthase-like 4		 0.65 0.32 -0.3
37 AT5G53410 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G52080.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.65 0.33 -0.32
38 AT3G25585 aminoalcoholphosphotransferase aminoalcoholphosphotransferase,
ATAAPT2		 0.64 0.31 -0.32
39 AT3G27060 Ferritin/ribonucleotide reductase-like family protein ATTSO2, TSO MEANING 'UGLY' IN
CHINESE 2		 -0.64 0.31 -0.31
40 AT4G10510 Subtilase family protein 0.64 0.33 -0.31
41 AT5G22450 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G19390.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.64 0.32 -0.31
42 AT1G58230 binding 0.64 0.32 -0.34
43 AT5G39080 HXXXD-type acyl-transferase family protein -0.64 0.3 -0.31
44 AT1G04690 potassium channel beta subunit 1 potassium channel beta subunit 1,
KV-BETA1		 -0.64 0.31 -0.31
45 AT2G01090 Ubiquinol-cytochrome C reductase hinge protein -0.64 0.29 -0.31
46 AT2G24970 unknown protein; Has 33 Blast hits to 33 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.64 0.33 -0.31
47 AT1G19610 Arabidopsis defensin-like protein LOW-MOLECULAR-WEIGHT CYSTEINE-RICH
78, PDF1.4		 -0.64 0.3 -0.3
48 AT3G63070 Tudor/PWWP/MBT domain-containing protein 0.63 0.32 -0.34
49 AT2G36370 ubiquitin-protein ligases 0.63 0.33 -0.32
50 AT4G11110 SPA1-related 2 SPA1-related 2 0.63 0.34 -0.31
51 AT5G48840 homolog of bacterial PANC ARABIDOPSIS THALIANA PANTOTHENATE
SYNTHETASE, homolog of bacterial
PANC, PANTOTHENATE SYNTHETASE		 -0.63 0.31 -0.33
52 AT5G37890 Protein with RING/U-box and TRAF-like domains -0.63 0.32 -0.34
53 AT1G06230 global transcription factor group E4 global transcription factor group
E4		 0.63 0.32 -0.35
54 AT5G55630 Outward rectifying potassium channel protein ATKCO1, TANDEM PORE K+ CHANNEL 1,
CA2+ ACTIVATED OUTWARD RECTIFYING
K+ CHANNEL 1, TWO PORE K CHANNEL,
TWO PORE K CHANNEL 1		 -0.63 0.31 -0.31
55 AT5G25080 Sas10/Utp3/C1D family -0.63 0.32 -0.32
56 AT3G21430 DNA binding ALWAYS EARLY 3, ARABIDOPSIS
THALIANA ALWAYS EARLY 3		 0.63 0.33 -0.32
57 AT5G46910 Transcription factor jumonji (jmj) family protein / zinc
finger (C5HC2 type) family protein		 0.63 0.32 -0.31
58 AT3G10220 tubulin folding cofactor B EMBRYO DEFECTIVE 2804 -0.63 0.3 -0.3
59 AT4G00150 GRAS family transcription factor ARABIDOPSIS THALIANA HAIRY
MERISTEM 3, HAIRY MERISTEM 3, LOST
MERISTEMS 3		 0.62 0.33 -0.32
60 AT1G76460 RNA-binding (RRM/RBD/RNP motifs) family protein 0.62 0.31 -0.32
61 AT5G49900 Beta-glucosidase, GBA2 type family protein 0.62 0.32 -0.31
62 AT1G05205 unknown protein; Has 44 Blast hits to 44 proteins in 16
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.62 0.32 -0.31
63 AT1G01040 dicer-like 1 ABNORMAL SUSPENSOR 1, DICER-LIKE
1, CARPEL FACTORY, dicer-like 1,
EMBRYO DEFECTIVE 60, EMBRYO
DEFECTIVE 76, SHORT INTEGUMENTS 1,
SUSPENSOR 1		 0.62 0.31 -0.32
64 AT1G80460 Actin-like ATPase superfamily protein GLI1, nonhost resistance to P. s.
phaseolicola 1		 -0.62 0.31 -0.32
65 AT1G53710 Calcineurin-like metallo-phosphoesterase superfamily
protein		 -0.62 0.3 -0.32
66 AT3G20040 Hexokinase ATHXK4, HEXOKINASE-LIKE 2 0.62 0.33 -0.32
67 AT1G49660 carboxyesterase 5 carboxyesterase 5, carboxyesterase
5		 -0.62 0.31 -0.31
68 AT1G75550 glycine-rich protein 0.62 0.33 -0.31
69 AT5G08160 serine/threonine protein kinase 3 serine/threonine protein kinase 3,
serine/threonine protein kinase 3		 -0.62 0.31 -0.31
70 AT4G21480 sugar transporter protein 12 sugar transporter protein 12 -0.62 0.29 -0.32
71 AT4G22140 PHD finger family protein / bromo-adjacent homology (BAH)
domain-containing protein		 EARLY BOLTING IN SHORT DAYS -0.62 0.32 -0.32
72 AT1G29140 Pollen Ole e 1 allergen and extensin family protein 0.61 0.32 -0.32
73 AT2G33600 NAD(P)-binding Rossmann-fold superfamily protein -0.61 0.31 -0.31
74 AT4G25570 Cytochrome b561/ferric reductase transmembrane protein
family		 ACYB-2 -0.61 0.31 -0.32
75 AT1G71970 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G22680.1); Has 58 Blast
hits to 58 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 4; Fungi - 0; Plants - 49; Viruses - 0; Other
Eukaryotes - 5 (source: NCBI BLink).		 -0.61 0.32 -0.33
76 AT4G27710 cytochrome P450, family 709, subfamily B, polypeptide 3 cytochrome P450, family 709,
subfamily B, polypeptide 3		 -0.61 0.33 -0.31
77 AT3G58740 citrate synthase 1 citrate synthase 1 0.61 0.37 -0.34
78 AT2G23610 methyl esterase 3 ARABIDOPSIS THALIANA METHYL
ESTERASE 3, methyl esterase 3		 -0.6 0.31 -0.31
79 AT5G45790 Ubiquitin carboxyl-terminal hydrolase family protein -0.6 0.31 -0.31
80 AT3G16770 ethylene-responsive element binding protein ethylene-responsive element
binding protein,
ethylene-responsive element
binding protein, ETHYLENE RESPONSE
FACTOR 72, RELATED TO AP2 3		 -0.6 0.32 -0.3
81 AT2G16485 nucleic acid binding;zinc ion binding;DNA binding 0.6 0.33 -0.31
82 AT5G56790 Protein kinase superfamily protein 0.6 0.32 -0.3
83 AT3G06930 protein arginine methyltransferase 4B ARABIDOPSIS THALIANA PROTEIN
ARGININE METHYLTRANSFERASE 4B,
protein arginine methyltransferase
4B		 -0.6 0.32 -0.32
84 AT5G23405 HMG-box (high mobility group) DNA-binding family protein -0.6 0.32 -0.32
85 AT1G17350 NADH:ubiquinone oxidoreductase intermediate-associated
protein 30		 -0.6 0.31 -0.32
86 AT2G02400 NAD(P)-binding Rossmann-fold superfamily protein -0.6 0.33 -0.3
87 AT2G38870 Serine protease inhibitor, potato inhibitor I-type family
protein		 -0.59 0.33 -0.31
88 AT2G04340 unknown protein; Has 24 Blast hits to 24 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.59 0.32 -0.31
89 AT3G15430 Regulator of chromosome condensation (RCC1) family protein 0.59 0.31 -0.33
90 AT1G05120 Helicase protein with RING/U-box domain 0.59 0.31 -0.31
91 AT1G14310 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.59 0.32 -0.31
92 AT5G47130 Bax inhibitor-1 family protein -0.59 0.31 -0.33
93 AT4G09150 T-complex protein 11 0.59 0.33 -0.32
94 AT2G46000 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Mesoderm development candidate 2 (InterPro:IPR019330); Has
31 Blast hits to 31 proteins in 13 species: Archae - 0;
Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 26; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.3 -0.34
95 AT5G57130 Clp amino terminal domain-containing protein 0.59 0.3 -0.33
96 AT1G66620 Protein with RING/U-box and TRAF-like domains -0.59 0.33 -0.31
97 AT1G80350 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 AAA1, ATKTN1, BOTERO 1, ECTOPIC
ROOT HAIR 3, FRAGILE FIBER 2,
FURCA2, FAT ROOT, KATANIN 1, LUE1		 -0.59 0.32 -0.29
98 AT2G43350 glutathione peroxidase 3 glutathione peroxidase 3,
glutathione peroxidase 3		 -0.59 0.32 -0.3
99 AT3G49810 ARM repeat superfamily protein 0.59 0.29 -0.31
100 AT2G42160 zinc finger (ubiquitin-hydrolase) domain-containing protein BRAP2 RING ZnF UBP
domain-containing protein 1		 0.59 0.3 -0.3
101 AT4G12490 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.59 0.33 -0.31
102 AT5G37370 PRP38 family protein ATSRL1 0.59 0.32 -0.3
103 AT3G12900 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.59 0.33 -0.31
104 AT1G27360 squamosa promoter-like 11 squamosa promoter-like 11 0.59 0.32 -0.29
105 AT3G61440 cysteine synthase C1 BETA-SUBSTITUTED ALA SYNTHASE 3;1,
CYSTEINE SYNTHASE C1, cysteine
synthase C1		 -0.59 0.33 -0.3
106 AT1G74780 Nodulin-like / Major Facilitator Superfamily protein -0.58 0.33 -0.3
107 AT5G22400 Rho GTPase activating protein with PAK-box/P21-Rho-binding
domain		 -0.58 0.32 -0.32
108 AT1G27220 paired amphipathic helix repeat-containing protein -0.58 0.31 -0.33
109 AT1G14720 xyloglucan endotransglucosylase/hydrolase 28 ATXTH28, ENDOXYLOGLUCAN
TRANSFERASE A2, xyloglucan
endotransglucosylase/hydrolase 28,
xyloglucan endotransglycosylase
related 2		 -0.58 0.33 -0.31
110 AT4G25410 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.57 0.31 -0.3
111 AT3G14220 GDSL-like Lipase/Acylhydrolase superfamily protein -0.57 0.3 -0.31
112 AT5G59410 Rab5-interacting family protein -0.57 0.31 -0.34
113 AT5G52110 Protein of unknown function (DUF2930) COFACTOR ASSEMBLY OF COMPLEX C,
HIGH CHLOROPHYLL FLUORESCENCE 208		 -0.57 0.34 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
114 C0174 MST_2370.2 - - - 0.82 0.45 -0.45
115 C0233 Sinapinic acid - cis-Sinapinate; Sinapate ferulate and sinapate biosynthesis,
sinapate ester biosynthesis,
free phenylpropanoid acid biosynthesis 		0.72 0.43 -0.46 C0233
116 C0074 Cystine L-Cystine L-Cystine protein precursor 0.72 0.47 -0.45 C0074
117 C0212 PR_MST_2336.8 - - - 0.66 0.43 -0.45