AT3G08890 : -
Query Information
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AGICode AT3G08890
Description Protein of unknown function, DUF538
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G08890 Protein of unknown function, DUF538 1 0.32 -0.31
2 AT1G72170 Domain of unknown function (DUF543) 0.8 0.32 -0.32
3 AT1G54110 Membrane fusion protein Use1 0.78 0.31 -0.31
4 AT5G17870 plastid-specific 50S ribosomal protein 6 plastid-specific 50S ribosomal
protein 6		 0.76 0.33 -0.31
5 AT5G28500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G04550.1); Has 109 Blast hits to 109 proteins in
49 species: Archae - 0; Bacteria - 67; Metazoa - 0; Fungi -
0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 0.74 0.3 -0.33
6 AT4G11100 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G03060.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.73 0.3 -0.34
7 AT1G74320 Protein kinase superfamily protein 0.72 0.33 -0.3
8 AT4G02790 GTP-binding family protein EMBRYO DEFECTIVE 3129 0.72 0.3 -0.32
9 AT1G63900 E3 Ubiquitin ligase family protein DIAP1-like protein 1 0.71 0.32 -0.32
10 AT4G31770 debranching enzyme 1 ARABIDOPSIS THALIANA DEBRANCHING
ENZYME 1, debranching enzyme 1		 0.71 0.33 -0.31
11 AT5G59120 subtilase 4.13 subtilase 4.13, subtilase 4.13 0.71 0.33 -0.32
12 AT5G53800 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.7 0.32 -0.32
13 AT4G02850 phenazine biosynthesis PhzC/PhzF family protein 0.7 0.32 -0.32
14 AT4G08280 Thioredoxin superfamily protein 0.69 0.31 -0.3
15 AT1G65290 mitochondrial acyl carrier protein 2 mitochondrial acyl carrier protein
2		 0.69 0.34 -0.32
16 AT4G02130 galacturonosyltransferase 6 galacturonosyltransferase 6, LGT10 0.69 0.32 -0.32
17 AT1G64320 myosin heavy chain-related -0.68 0.3 -0.34
18 AT1G43170 ribosomal protein 1 ribosomal protein 1, embryo
defective 2207, ribosomal protein
1, RPL3A		 0.67 0.34 -0.33
19 AT4G12060 Double Clp-N motif protein 0.66 0.33 -0.33
20 AT1G47790 F-box and associated interaction domains-containing protein 0.66 0.31 -0.32
21 AT5G17070 CONTAINS InterPro DOMAIN/s: Protein phosphatase 4 core
regulatory subunit R2 (InterPro:IPR015267); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.65 0.34 -0.34
22 AT1G47250 20S proteasome alpha subunit F2 20S proteasome alpha subunit F2 0.65 0.31 -0.32
23 AT4G01130 GDSL-like Lipase/Acylhydrolase superfamily protein 0.65 0.31 -0.32
24 AT2G47660 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.65 0.3 -0.32
25 AT2G36760 UDP-glucosyl transferase 73C2 UDP-glucosyl transferase 73C2 -0.65 0.33 -0.3
26 AT4G05520 EPS15 homology domain 2 EPS15 homology domain 2, EPS15
homology domain 2		 0.64 0.3 -0.33
27 AT3G55170 Ribosomal L29 family protein 0.64 0.34 -0.31
28 AT5G02310 proteolysis 6 proteolysis 6 -0.64 0.32 -0.31
29 AT3G13065 STRUBBELIG-receptor family 4 STRUBBELIG-receptor family 4 -0.63 0.32 -0.3
30 AT5G18180 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein -0.63 0.3 -0.31
31 AT1G11250 syntaxin of plants 125 ATSYP125, syntaxin of plants 125 0.63 0.32 -0.33
32 AT1G63170 Zinc finger, C3HC4 type (RING finger) family protein 0.63 0.31 -0.33
33 AT1G62330 O-fucosyltransferase family protein 0.63 0.32 -0.31
34 AT3G20140 cytochrome P450, family 705, subfamily A, polypeptide 23 cytochrome P450, family 705,
subfamily A, polypeptide 23		 0.63 0.31 -0.32
35 AT1G29600 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.63 0.32 -0.31
36 AT2G30840 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.62 0.32 -0.34
37 AT3G53710 ARF-GAP domain 6 ARF-GAP domain 6 0.62 0.33 -0.31
38 AT4G12110 sterol-4alpha-methyl oxidase 1-1 ATSMO1-1, sterol-4alpha-methyl
oxidase 1-1		 0.62 0.3 -0.33
39 AT1G60710 NAD(P)-linked oxidoreductase superfamily protein ATB2 0.62 0.31 -0.3
40 AT3G54270 sucrose-6F-phosphate phosphohydrolase family protein -0.62 0.32 -0.33
41 AT4G08960 phosphotyrosyl phosphatase activator (PTPA) family protein -0.62 0.29 -0.3
42 AT5G46300 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.62 0.34 -0.32
43 AT4G32960 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G32970.1); Has 106 Blast hits
to 106 proteins in 39 species: Archae - 0; Bacteria - 0;
Metazoa - 62; Fungi - 0; Plants - 37; Viruses - 0; Other
Eukaryotes - 7 (source: NCBI BLink).		 0.62 0.34 -0.31
44 AT1G63880 Disease resistance protein (TIR-NBS-LRR class) family 0.61 0.32 -0.31
45 AT3G56600 Protein kinase superfamily protein 0.61 0.35 -0.31
46 AT1G48310 chromatin remodeling factor18 CHA18, chromatin remodeling
factor18		 -0.61 0.34 -0.31
47 AT5G03370 acylphosphatase family 0.61 0.31 -0.33
48 AT3G01770 bromodomain and extraterminal domain protein 10 bromodomain and extraterminal
domain protein 10, bromodomain and
extraterminal domain protein 10		 -0.61 0.3 -0.3
49 AT3G54670 Structural maintenance of chromosomes (SMC) family protein ATSMC1, STRUCTURAL MAINTENANCE OF
CHROMOSOMES 1, TITAN8		 -0.61 0.33 -0.32
50 AT4G02460 DNA mismatch repair protein, putative POSTMEIOTIC SEGREGATION 1 -0.61 0.31 -0.32
51 AT3G27700 zinc finger (CCCH-type) family protein / RNA recognition
motif (RRM)-containing protein		 -0.61 0.33 -0.32
52 AT5G11460 Protein of unknown function (DUF581) 0.61 0.32 -0.31
53 AT1G68370 Chaperone DnaJ-domain superfamily protein ALTERED RESPONSE TO GRAVITY 1 0.61 0.3 -0.31
54 AT4G00420 Double-stranded RNA-binding domain (DsRBD)-containing
protein		 0.61 0.32 -0.3
55 AT4G05050 ubiquitin 11 ubiquitin 11 0.61 0.34 -0.31
56 ATMG00070 NADH dehydrogenase subunit 9 NADH dehydrogenase subunit 9 -0.61 0.31 -0.29
57 AT5G51820 phosphoglucomutase ARABIDOPSIS THALIANA
PHOSPHOGLUCOMUTASE,
phosphoglucomutase, PGM1,
STARCH-FREE 1		 0.61 0.32 -0.3
58 AT5G24320 Transducin/WD40 repeat-like superfamily protein -0.61 0.33 -0.31
59 AT1G68930 pentatricopeptide (PPR) repeat-containing protein 0.6 0.33 -0.33
60 AT3G08880 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G01570.1); Has 177 Blast hits
to 175 proteins in 60 species: Archae - 4; Bacteria - 33;
Metazoa - 18; Fungi - 11; Plants - 59; Viruses - 0; Other
Eukaryotes - 52 (source: NCBI BLink).		 0.6 0.31 -0.31
61 AT5G39990 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 0.6 0.3 -0.33
62 AT2G07650 transposable element gene -0.6 0.29 -0.33
63 AT5G22450 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G19390.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.6 0.31 -0.31
64 ATMG00670 hypothetical protein ORF275 -0.6 0.33 -0.32
65 AT1G64490 DEK, chromatin associated protein 0.6 0.32 -0.3
66 AT5G27020 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.6 0.3 -0.31
67 AT3G43500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G42080.1); Has 8 Blast hits to
8 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.6 0.31 -0.32
68 AT5G10810 enhancer of rudimentary protein, putative ARABIDOPSIS THALIANA ENHANCER OF
RUDIMENTARY HOMOLOGUE, ENHANCER OF
RUDIMENTARY HOMOLOGUE		 0.6 0.35 -0.32
69 AT4G13050 Acyl-ACP thioesterase 0.6 0.3 -0.32
70 AT3G50370 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 26 plant
structures; EXPRESSED DURING: 15 growth stages; Has 27734
Blast hits to 16708 proteins in 1259 species: Archae - 81;
Bacteria - 3434; Metazoa - 10876; Fungi - 2514; Plants -
987; Viruses - 212; Other Eukaryotes - 9630 (source: NCBI
BLink).		 -0.59 0.32 -0.35
71 AT5G05750 DNAJ heat shock N-terminal domain-containing protein 0.59 0.3 -0.32
72 AT4G00550 digalactosyl diacylglycerol deficient 2 digalactosyl diacylglycerol
deficient 2		 -0.59 0.31 -0.32
73 AT3G50720 Protein kinase superfamily protein 0.59 0.31 -0.3
74 AT5G20580 BEST Arabidopsis thaliana protein match is: FRIGIDA
interacting protein 1 (TAIR:AT2G06005.1); Has 167 Blast
hits to 167 proteins in 73 species: Archae - 0; Bacteria -
25; Metazoa - 58; Fungi - 25; Plants - 43; Viruses - 0;
Other Eukaryotes - 16 (source: NCBI BLink).		 0.59 0.3 -0.32
75 AT3G46920 Protein kinase superfamily protein with
octicosapeptide/Phox/Bem1p domain		 -0.59 0.31 -0.31
76 AT5G36090 transposable element gene 0.59 0.3 -0.32
77 AT5G05890 UDP-Glycosyltransferase superfamily protein 0.59 0.31 -0.31
78 AT1G73960 TBP-associated factor 2 TBP-associated factor 2 -0.59 0.31 -0.34
79 AT3G13720 PRA1 (Prenylated rab acceptor) family protein PRENYLATED RAB ACCEPTOR 1.F3, PRA8 0.59 0.34 -0.32
80 AT1G51880 root hair specific 6 root hair specific 6 0.59 0.32 -0.32
81 AT1G59950 NAD(P)-linked oxidoreductase superfamily protein -0.59 0.32 -0.34
82 AT5G08565 Transcription initiation Spt4-like protein 0.59 0.34 -0.3
83 AT5G04460 RING/U-box superfamily protein -0.58 0.31 -0.33
84 AT4G31000 Calmodulin-binding protein -0.58 0.32 -0.33
85 AT1G69790 Protein kinase superfamily protein -0.57 0.32 -0.32
86 AT3G04740 RNA polymerase II transcription mediators ARABIDOPSIS MEDIATOR COMPONENTS
14, MEDIATOR COMPONENTS 14,
STRUWWELPETER		 -0.57 0.31 -0.33
87 AT1G57650 ATP binding -0.57 0.32 -0.32
88 AT4G27050 F-box/RNI-like superfamily protein -0.57 0.31 -0.31
89 AT3G21430 DNA binding ALWAYS EARLY 3, ARABIDOPSIS
THALIANA ALWAYS EARLY 3		 -0.57 0.3 -0.31
90 AT5G51390 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.56 0.31 -0.31
91 AT5G58040 homolog of yeast FIP1 [V] homolog of yeast FIP1 [V],
ATFIPS5, homolog of yeast FIP1
[V], FIPS5		 -0.56 0.29 -0.32
92 AT3G09530 exocyst subunit exo70 family protein H3 exocyst subunit exo70 family
protein H3, exocyst subunit exo70
family protein H3		 -0.56 0.31 -0.31
93 AT2G25930 hydroxyproline-rich glycoprotein family protein EARLY FLOWERING 3, PYK20 -0.56 0.36 -0.31
94 AT2G14800 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G44713.1); Has 41 Blast hits
to 38 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 7; Fungi - 2; Plants - 16; Viruses - 0; Other
Eukaryotes - 16 (source: NCBI BLink).		 -0.56 0.31 -0.32
95 AT1G32230 WWE protein-protein interaction domain protein family ARABIDOPSIS THALIANA P8
(INTERACTING PROTEIN), AtRCD1,
CEO, CEO1, RADICAL-INDUCED CELL
DEATH1		 -0.56 0.34 -0.32
96 AT3G51120 DNA binding;zinc ion binding;nucleic acid binding;nucleic
acid binding		 -0.55 0.32 -0.29
97 AT1G30010 Intron maturase, type II family protein -0.55 0.32 -0.31
98 AT2G31970 DNA repair-recombination protein (RAD50) ATRAD50, RAD50 -0.55 0.33 -0.32
99 AT3G11040 Glycosyl hydrolase family 85 AtENGase85B,
Endo-beta-N-acetyglucosaminidase
85B		 -0.55 0.31 -0.31
100 AT5G43790 Pentatricopeptide repeat (PPR) superfamily protein -0.55 0.36 -0.32
101 AT1G42700 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
response to cold; LOCATED IN: nucleus; BEST Arabidopsis
thaliana protein match is: Plant transposase (Ptta/En/Spm
family) (TAIR:AT1G40087.1); Has 10 Blast hits to 10
proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.55 0.32 -0.3
102 AT5G45260 Disease resistance protein (TIR-NBS-LRR class) ARABIDOPSIS THALIANA WRKY DOMAIN
PROTEIN 52, RESISTANT TO RALSTONIA
SOLANACEARUM 1, SENSITIVE TO LOW
HUMIDITY 1		 -0.54 0.32 -0.32
103 AT1G64100 pentatricopeptide (PPR) repeat-containing protein -0.54 0.32 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
104 C0183 MST_3033.1 - - - 0.78 0.44 -0.46