AT3G08920 : -
Query Information
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AGICode AT3G08920
Description Rhodanese/Cell cycle control phosphatase superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G08920 Rhodanese/Cell cycle control phosphatase superfamily
protein		 1 0.31 -0.32
2 AT3G55040 glutathione transferase lambda 2 glutathione transferase lambda 2 0.95 0.32 -0.34
3 AT1G07320 ribosomal protein L4 EMBRYO DEFECTIVE 2784, ribosomal
protein L4		 0.95 0.32 -0.31
4 AT1G53520 Chalcone-flavanone isomerase family protein 0.95 0.33 -0.31
5 AT3G13120 Ribosomal protein S10p/S20e family protein 0.95 0.32 -0.33
6 AT1G68590 Ribosomal protein PSRP-3/Ycf65 0.95 0.32 -0.32
7 AT2G37660 NAD(P)-binding Rossmann-fold superfamily protein 0.95 0.31 -0.31
8 AT2G42220 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.95 0.31 -0.33
9 AT4G21280 photosystem II subunit QA PHOTOSYSTEM II SUBUNIT Q,
PHOTOSYSTEM II SUBUNIT Q-1,
photosystem II subunit QA		 0.94 0.32 -0.32
10 AT4G39040 RNA-binding CRS1 / YhbY (CRM) domain protein 0.94 0.32 -0.35
11 AT2G26930 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase 4-(cytidine
5'-phospho)-2-C-methyl-D-erithrito
l kinase, 4-(cytidine
5'-phospho)-2-C-methyl-D-erithrito
l kinase, 4-(cytidine
5′-diphospho)-2-C-methyl-d-e
rythritol kinase, 4-(cytidine
5′-diphospho)-2-C-methyl-d-e
rythritol kinase, ISPE, PIGMENT
DEFECTIVE 277		 0.94 0.31 -0.3
12 AT5G38520 alpha/beta-Hydrolases superfamily protein 0.94 0.31 -0.32
13 AT5G18660 NAD(P)-binding Rossmann-fold superfamily protein PALE-GREEN AND CHLOROPHYLL B
REDUCED 2		 0.93 0.3 -0.33
14 AT5G11480 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.93 0.33 -0.32
15 AT5G53580 NAD(P)-linked oxidoreductase superfamily protein AtPLR1, pyridoxal reductase 1 0.93 0.33 -0.31
16 AT5G14910 Heavy metal transport/detoxification superfamily protein 0.93 0.32 -0.31
17 AT5G65220 Ribosomal L29 family protein 0.93 0.3 -0.32
18 AT4G09650 ATP synthase delta-subunit gene ATP synthase delta-subunit gene,
PIGMENT DEFECTIVE 332		 0.93 0.28 -0.33
19 AT4G04640 ATPase, F1 complex, gamma subunit protein ATPC1 0.93 0.33 -0.33
20 AT1G78180 Mitochondrial substrate carrier family protein 0.93 0.32 -0.3
21 AT5G45680 FK506-binding protein 13 FK506 BINDING PROTEIN 13,
FK506-binding protein 13		 0.93 0.34 -0.3
22 AT4G11175 Nucleic acid-binding, OB-fold-like protein 0.93 0.31 -0.31
23 AT1G01970 Tetratricopeptide repeat (TPR)-like superfamily protein 0.93 0.32 -0.32
24 AT3G14930 Uroporphyrinogen decarboxylase HEME1 0.93 0.3 -0.32
25 AT1G48350 Ribosomal L18p/L5e family protein EMBRYO DEFECTIVE 3105 0.93 0.33 -0.33
26 AT3G25805 unknown protein; Has 98 Blast hits to 98 proteins in 45
species: Archae - 0; Bacteria - 51; Metazoa - 0; Fungi - 0;
Plants - 43; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.93 0.33 -0.31
27 AT1G14270 CAAX amino terminal protease family protein 0.93 0.3 -0.32
28 AT3G20230 Ribosomal L18p/L5e family protein 0.93 0.31 -0.3
29 AT5G52960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3143 (InterPro:IPR021489);
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 0.92 0.3 -0.31
30 AT1G55370 NDH-dependent cyclic electron flow 5 NDH-dependent cyclic electron flow
5		 0.92 0.32 -0.29
31 AT3G54210 Ribosomal protein L17 family protein 0.92 0.3 -0.3
32 AT4G17600 Chlorophyll A-B binding family protein LIL3:1 0.92 0.32 -0.33
33 AT1G03600 photosystem II family protein PSB27 0.92 0.35 -0.31
34 AT1G32990 plastid ribosomal protein l11 plastid ribosomal protein l11 0.92 0.3 -0.31
35 AT4G18370 DEGP protease 5 DEGP protease 5, DEGP PROTEASE 5,
PROTEASE HHOA PRECUSOR		 0.92 0.32 -0.31
36 AT1G67700 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 49
Blast hits to 49 proteins in 20 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses
- 0; Other Eukaryotes - 5 (source: NCBI BLink).		 0.92 0.28 -0.3
37 AT4G25080 magnesium-protoporphyrin IX methyltransferase magnesium-protoporphyrin IX
methyltransferase		 0.92 0.31 -0.33
38 AT3G51510 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN:
22 plant structures; EXPRESSED DURING: 13 growth stages;
Has 42 Blast hits to 42 proteins in 19 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses
- 0; Other Eukaryotes - 2 (source: NCBI BLink).		 0.92 0.33 -0.32
39 AT3G01480 cyclophilin 38 ARABIDOPSIS CYCLOPHILIN 38,
cyclophilin 38		 0.92 0.32 -0.31
40 AT3G25920 ribosomal protein L15 ribosomal protein L15 0.92 0.32 -0.32
41 AT4G03280 photosynthetic electron transfer C photosynthetic electron transfer
C, PROTON GRADIENT REGULATION 1		 0.92 0.33 -0.3
42 AT2G40490 Uroporphyrinogen decarboxylase HEME2 0.92 0.3 -0.32
43 AT1G44920 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3054 (InterPro:IPR021414);
Has 246 Blast hits to 246 proteins in 119 species: Archae -
14; Bacteria - 181; Metazoa - 0; Fungi - 0; Plants - 45;
Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).		 0.92 0.33 -0.34
44 AT1G01080 RNA-binding (RRM/RBD/RNP motifs) family protein 0.92 0.33 -0.31
45 AT1G75690 DnaJ/Hsp40 cysteine-rich domain superfamily protein LOW QUANTUM YIELD OF PHOTOSYSTEM
II 1		 0.92 0.33 -0.31
46 AT1G08520 ALBINA 1 ALB-1V, ALBINA 1, CHLD, PIGMENT
DEFECTIVE EMBRYO 166, V157		 0.92 0.33 -0.33
47 AT4G32260 ATPase, F0 complex, subunit B/B', bacterial/chloroplast PIGMENT DEFECTIVE 334 0.92 0.31 -0.33
48 AT5G57930 Arabidopsis thaliana protein of unknown function (DUF794) ACCUMULATION OF PHOTOSYSTEM ONE 2,
embryo defective 1629		 0.92 0.32 -0.33
49 AT1G20020 ferredoxin-NADP(+)-oxidoreductase 2 LEAF FNR 2,
ferredoxin-NADP(+)-oxidoreductase
2		 0.92 0.31 -0.34
50 AT5G14320 Ribosomal protein S13/S18 family EMBRYO DEFECTIVE 3137 0.92 0.32 -0.32
51 AT5G51545 low psii accumulation2 low psii accumulation2 0.92 0.32 -0.32
52 AT2G18710 SECY homolog 1 SECY homolog 1 0.92 0.32 -0.31
53 AT5G52970 thylakoid lumen 15.0 kDa protein 0.92 0.29 -0.33
54 AT4G24930 thylakoid lumenal 17.9 kDa protein, chloroplast 0.92 0.34 -0.3
55 AT4G24750 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.92 0.32 -0.3
56 AT3G52150 RNA-binding (RRM/RBD/RNP motifs) family protein 0.92 0.32 -0.3
57 AT1G67740 photosystem II BY photosystem II BY, YCF32 0.92 0.31 -0.3
58 AT5G58250 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
thylakoid, chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF2488
(InterPro:IPR019616); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 EMBRYO DEFECTIVE 3143 0.91 0.31 -0.31
59 AT2G29180 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 34
Blast hits to 33 proteins in 16 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses
- 0; Other Eukaryotes - 1 (source: NCBI BLink).		 0.91 0.32 -0.3
60 AT2G40690 NAD-dependent glycerol-3-phosphate dehydrogenase family
protein		 GLY1, SUPPRESSOR OF FATTY ACID
DESATURASE DEFICIENCY 1		 0.91 0.29 -0.31
61 AT3G28460 methyltransferases 0.91 0.31 -0.32
62 AT1G15820 light harvesting complex photosystem II subunit 6 CP24, light harvesting complex
photosystem II subunit 6		 0.91 0.3 -0.32
63 AT2G33450 Ribosomal L28 family 0.91 0.3 -0.31
64 AT1G30380 photosystem I subunit K photosystem I subunit K 0.91 0.33 -0.31
65 AT1G32060 phosphoribulokinase phosphoribulokinase 0.91 0.31 -0.31
66 AT1G03475 Coproporphyrinogen III oxidase ATCPO-I, HEMF1, LESION INITIATION
2		 0.91 0.33 -0.32
67 AT5G51110 Transcriptional coactivator/pterin dehydratase 0.91 0.31 -0.3
68 AT4G18480 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 CHLORINA 42, CHLORINA 42, CHL11,
CHLI-1, CHLI1		 0.91 0.32 -0.31
69 AT4G02770 photosystem I subunit D-1 photosystem I subunit D-1 0.91 0.31 -0.31
70 AT3G02730 thioredoxin F-type 1 ATF1, thioredoxin F-type 1 0.91 0.31 -0.3
71 AT3G18890 NAD(P)-binding Rossmann-fold superfamily protein translocon at the inner envelope
membrane of chloroplasts 62,
translocon at the inner envelope
membrane of chloroplasts 62		 0.91 0.28 -0.31
72 AT3G53130 Cytochrome P450 superfamily protein CYTOCHROME P450 97C1, LUTEIN
DEFICIENT 1		 0.91 0.32 -0.32
73 AT1G59840 cofactor assembly of complex C cofactor assembly of complex C 0.91 0.33 -0.34
74 AT3G56910 plastid-specific 50S ribosomal protein 5 plastid-specific 50S ribosomal
protein 5		 0.91 0.3 -0.31
75 AT3G29185 Domain of unknown function (DUF3598) 0.91 0.3 -0.31
76 AT1G78630 Ribosomal protein L13 family protein embryo defective 1473 0.91 0.31 -0.31
77 AT4G16410 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF751 (InterPro:IPR008470); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.91 0.32 -0.31
78 AT5G01530 light harvesting complex photosystem II light harvesting complex
photosystem II		 0.91 0.31 -0.31
79 AT1G35680 Ribosomal protein L21 chloroplast ribosomal protein L21 0.91 0.33 -0.3
80 AT1G32470 Single hybrid motif superfamily protein 0.91 0.3 -0.32
81 AT3G56940 dicarboxylate diiron protein, putative (Crd1) ACSF, CHL27, COPPER RESPONSE
DEFECT 1		 0.91 0.3 -0.31
82 AT5G53490 Tetratricopeptide repeat (TPR)-like superfamily protein 0.91 0.33 -0.32
83 AT5G16140 Peptidyl-tRNA hydrolase family protein 0.91 0.32 -0.3
84 AT4G30620 Uncharacterised BCR, YbaB family COG0718 0.91 0.33 -0.3
85 AT4G15510 Photosystem II reaction center PsbP family protein 0.91 0.32 -0.31
86 AT1G03680 thioredoxin M-type 1 thioredoxin M-type 1, ARABIDOPSIS
THIOREDOXIN M-TYPE 1, thioredoxin
M-type 1, THIOREDOXIN M-TYPE 1		 0.91 0.31 -0.3
87 AT1G11860 Glycine cleavage T-protein family 0.91 0.3 -0.32
88 AT5G06290 2-cysteine peroxiredoxin B 2-cysteine peroxiredoxin B, 2-CYS
PEROXIREDOXIN B		 0.9 0.32 -0.34
89 AT1G20810 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.9 0.29 -0.31
90 AT5G30510 ribosomal protein S1 ARRPS1, ribosomal protein S1 0.9 0.3 -0.31
91 AT2G20890 photosystem II reaction center PSB29 protein photosystem II reaction center
PSB29 protein, THYLAKOID
FORMATION1		 0.9 0.32 -0.31
92 AT5G03940 chloroplast signal recognition particle 54 kDa subunit 54 CHLOROPLAST PROTEIN,
chloroplast signal recognition
particle 54 kDa subunit,
FIFTY-FOUR CHLOROPLAST HOMOLOGUE,
SIGNAL RECOGNITION PARTICLE 54 KDA
SUBUNIT CHLOROPLAST PROTEIN		 0.9 0.31 -0.31
93 AT1G06680 photosystem II subunit P-1 OXYGEN EVOLVING COMPLEX SUBUNIT 23
KDA, OXYGEN-EVOLVING ENHANCER
PROTEIN 2, photosystem II subunit
P-1, PHOTOSYSTEM II SUBUNIT P		 0.9 0.32 -0.32
94 AT3G26900 shikimate kinase like 1 Arabidopsis thaliana shikimate
kinase-like 1, shikimate
kinase-like 1		 0.9 0.3 -0.33
95 AT1G73110 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.9 0.34 -0.31
96 AT3G60370 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.9 0.31 -0.32
97 AT1G52230 photosystem I subunit H2 PHOTOSYSTEM I SUBUNIT H-2,
photosystem I subunit H2, PSI-H		 0.9 0.31 -0.3
98 AT3G56650 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP
family protein		 0.9 0.31 -0.3
99 AT3G54050 high cyclic electron flow 1 high cyclic electron flow 1 0.9 0.34 -0.31
100 AT5G22340 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 58 Blast hits to 58 proteins
in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 57; Viruses - 0; Other Eukaryotes - 1
(source: NCBI BLink).		 0.9 0.29 -0.32
101 AT2G01590 chlororespiratory reduction 3 CHLORORESPIRATORY REDUCTION 3 0.9 0.35 -0.32
102 AT4G38160 Mitochondrial transcription termination factor family
protein		 pigment defective 191 0.9 0.3 -0.33
103 AT2G33800 Ribosomal protein S5 family protein EMBRYO DEFECTIVE 3113 0.9 0.33 -0.32
104 AT4G39620 Tetratricopeptide repeat (TPR)-like superfamily protein A. THALIANA PENTATRICOPEPTIDE
REPEAT 5, EMBRYO DEFECTIVE 2453		 0.9 0.32 -0.33
105 AT1G64510 Translation elongation factor EF1B/ribosomal protein S6
family protein		 0.9 0.31 -0.3
106 AT5G57030 Lycopene beta/epsilon cyclase protein LUTEIN DEFICIENT 2 0.9 0.32 -0.3
107 AT1G14030 Rubisco methyltransferase family protein 0.9 0.32 -0.34
108 AT3G46660 UDP-glucosyl transferase 76E12 UDP-glucosyl transferase 76E12 -0.86 0.31 -0.31
109 AT1G09970 Leucine-rich receptor-like protein kinase family protein LRR XI-23, receptor-like kinase 7 -0.86 0.32 -0.3
110 AT3G10500 NAC domain containing protein 53 NAC domain containing protein 53,
NAC domain containing protein 53		 -0.85 0.33 -0.32
111 AT2G42890 MEI2-like 2 MEI2-like 2, MEI2-like 2 -0.84 0.32 -0.31
112 AT1G63840 RING/U-box superfamily protein -0.84 0.3 -0.31
113 AT2G41220 glutamate synthase 2 glutamate synthase 2 -0.82 0.32 -0.29
114 AT4G39270 Leucine-rich repeat protein kinase family protein -0.82 0.3 -0.29
115 AT1G62300 WRKY family transcription factor ATWRKY6, WRKY6 -0.82 0.32 -0.31
116 AT5G44790 copper-exporting ATPase / responsive-to-antagonist 1 /
copper-transporting ATPase (RAN1)		 HMA7, RESPONSIVE-TO-ANTAGONIST 1 -0.81 0.31 -0.32
117 AT1G45145 thioredoxin H-type 5 THIOREDOXIN H-TYPE 5, thioredoxin
H-type 5, LOCUS OF INSENSITIVITY
TO VICTORIN 1, thioredoxin H-type
5		 -0.8 0.3 -0.29
118 AT5G66170 sulfurtransferase 18 sulfurtransferase 18 -0.8 0.33 -0.31
119 AT5G09440 EXORDIUM like 4 EXORDIUM like 4 -0.8 0.31 -0.33
120 AT5G18270 Arabidopsis NAC domain containing protein 87 Arabidopsis NAC domain containing
protein 87		 -0.79 0.33 -0.33
121 AT2G41380 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.79 0.31 -0.31
122 AT1G64060 respiratory burst oxidase protein F respiratory burst oxidase protein
F, ARABIDOPSIS THALIANA
RESPIRATORY BURST OXIDASE HOMOLOG
F, respiratory burst oxidase
protein F, RBOHAP108, RESPIRATORY
BURST OXIDASE PROTEIN F		 -0.78 0.31 -0.31
123 AT4G30270 xyloglucan endotransglucosylase/hydrolase 24 MERISTEM 5, meristem-5, SENESCENCE
4, xyloglucan
endotransglucosylase/hydrolase 24		 -0.76 0.32 -0.32
124 AT4G15610 Uncharacterised protein family (UPF0497) -0.76 0.33 -0.33
125 AT5G02170 Transmembrane amino acid transporter family protein -0.76 0.3 -0.31
126 AT5G18310 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G48500.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.76 0.3 -0.32
127 AT5G19450 calcium-dependent protein kinase 19 calcium-dependent protein kinase
19, CPK8		 -0.75 0.32 -0.31
128 AT1G07510 FTSH protease 10 FTSH protease 10 -0.75 0.3 -0.33
129 AT2G24570 WRKY DNA-binding protein 17 ATWRKY17, WRKY DNA-binding protein
17		 -0.75 0.33 -0.32
130 AT5G16680 RING/FYVE/PHD zinc finger superfamily protein -0.74 0.31 -0.31
131 AT2G44500 O-fucosyltransferase family protein -0.74 0.33 -0.32
132 AT3G57380 Glycosyltransferase family 61 protein -0.74 0.32 -0.3
133 AT3G28850 Glutaredoxin family protein -0.74 0.32 -0.32
134 AT3G29310 calmodulin-binding protein-related -0.74 0.33 -0.32
135 AT3G52780 Purple acid phosphatases superfamily protein ATPAP20, PAP20 -0.73 0.34 -0.31
136 AT5G49280 hydroxyproline-rich glycoprotein family protein -0.73 0.3 -0.3
137 AT3G08720 serine/threonine protein kinase 2 Arabidopsis thaliana protein
kinase 19, ARABIDOPSIS THALIANA
PROTEIN KINASE 2, ARABIDOPSIS
THALIANA SERINE/THREONINE PROTEIN
KINASE 2, serine/threonine protein
kinase 2		 -0.72 0.3 -0.33
138 AT4G21980 Ubiquitin-like superfamily protein AUTOPHAGY 8A, AUTOPHAGY-RELATED 8A -0.72 0.31 -0.35
139 AT5G63905 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 20 plant
structures; EXPRESSED DURING: 12 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.72 0.3 -0.34
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
140 C0241 Stigmasterol 3-O-β-D-glucoside - Stigmasterol 3-O-β-D-glucoside - -0.79 0.49 -0.47 C0241