AT3G02150 : plastid transcription factor 1
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT3G02150
Description plastid transcription factor 1
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G02150 plastid transcription factor 1 plastid transcription factor 1,
TEOSINTE BRANCHED1, CYCLOIDEA AND
PCF TRANSCRIPTION FACTOR 13, TFPD		 1 0.32 -0.31
2 AT1G09430 ATP-citrate lyase A-3 ATP-citrate lyase A-3 0.88 0.31 -0.31
3 AT1G33490 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2062 (InterPro:IPR018639); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G10140.1); Has 88 Blast hits to 88 proteins in 29
species: Archae - 0; Bacteria - 28; Metazoa - 0; Fungi - 0;
Plants - 54; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 0.88 0.32 -0.32
4 AT3G46670 UDP-glucosyl transferase 76E11 UDP-glucosyl transferase 76E11 0.87 0.31 -0.31
5 AT2G41820 Leucine-rich repeat protein kinase family protein -0.86 0.32 -0.33
6 AT1G23440 Peptidase C15, pyroglutamyl peptidase I-like 0.86 0.33 -0.32
7 AT3G58730 vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit
/ vacuolar proton pump D subunit (VATPD)		 0.85 0.29 -0.31
8 AT4G13360 ATP-dependent caseinolytic (Clp) protease/crotonase family
protein		 0.85 0.33 -0.31
9 AT1G48440 B-cell receptor-associated 31-like 0.84 0.31 -0.32
10 AT2G01350 quinolinate phoshoribosyltransferase quinolinate
phoshoribosyltransferase		 0.84 0.32 -0.34
11 AT4G26760 microtubule-associated protein 65-2 microtubule-associated protein
65-2		 -0.84 0.32 -0.31
12 AT3G54300 vesicle-associated membrane protein 727 vesicle-associated membrane
protein 727, VAMP727,
vesicle-associated membrane
protein 727		 0.84 0.32 -0.3
13 AT1G18720 Protein of unknown function (DUF962) 0.84 0.32 -0.32
14 AT3G43270 Plant invertase/pectin methylesterase inhibitor superfamily 0.84 0.33 -0.32
15 AT1G77710 CONTAINS InterPro DOMAIN/s: Ubiquitin-like, Ufm1
(InterPro:IPR005375); Has 244 Blast hits to 244 proteins in
106 species: Archae - 0; Bacteria - 0; Metazoa - 149; Fungi
- 0; Plants - 47; Viruses - 0; Other Eukaryotes - 48
(source: NCBI BLink).		 0.83 0.32 -0.32
16 AT4G29490 Metallopeptidase M24 family protein 0.83 0.33 -0.31
17 AT1G16180 Serinc-domain containing serine and sphingolipid
biosynthesis protein		 0.83 0.3 -0.3
18 AT3G48000 aldehyde dehydrogenase 2B4 aldehyde dehydrogenase 2, aldehyde
dehydrogenase 2A, aldehyde
dehydrogenase 2B4		 0.83 0.31 -0.31
19 AT3G03890 FMN binding 0.82 0.33 -0.33
20 AT1G18250 Pathogenesis-related thaumatin superfamily protein ATLP-1 -0.82 0.31 -0.33
21 AT1G10500 chloroplast-localized ISCA-like protein chloroplast-localized ISCA-like
protein, chloroplast-localized
ISCA-like protein		 0.82 0.31 -0.34
22 AT1G66250 O-Glycosyl hydrolases family 17 protein -0.82 0.34 -0.31
23 AT5G12890 UDP-Glycosyltransferase superfamily protein 0.82 0.32 -0.33
24 AT1G30090 Galactose oxidase/kelch repeat superfamily protein 0.82 0.32 -0.31
25 AT5G13800 pheophytinase Co-regulated with NYE1,
pheophytinase		 0.81 0.31 -0.31
26 AT5G61640 peptidemethionine sulfoxide reductase 1 ARABIDOPSIS THALIANA METHIONINE
SULFOXIDE REDUCTASE A1,
peptidemethionine sulfoxide
reductase 1		 0.81 0.29 -0.3
27 AT2G18950 homogentisate phytyltransferase 1 HOMOGENTISATE PHYTYLTRANSFERASE,
homogentisate phytyltransferase 1,
TPT1, VITAMIN E 2		 0.81 0.32 -0.33
28 AT5G62710 Leucine-rich repeat protein kinase family protein -0.81 0.29 -0.34
29 AT3G59670 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G37440.2); Has 77 Blast hits
to 77 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other
Eukaryotes - 4 (source: NCBI BLink).		 -0.81 0.33 -0.34
30 AT2G34810 FAD-binding Berberine family protein 0.81 0.34 -0.3
31 AT3G23490 cyanase cyanase 0.81 0.33 -0.3
32 AT5G59890 actin depolymerizing factor 4 actin depolymerizing factor 4,
ATADF4		 0.81 0.33 -0.31
33 AT2G39780 ribonuclease 2 ribonuclease 2 0.81 0.31 -0.31
34 AT4G35360 Uncharacterised conserved protein (UCP030210) 0.8 0.31 -0.33
35 AT1G49670 ARP protein (REF) NQR 0.8 0.32 -0.31
36 AT3G53780 RHOMBOID-like protein 4 RHOMBOID-like protein 4,
RHOMBOID-like protein 4		 0.8 0.31 -0.32
37 AT3G01970 WRKY DNA-binding protein 45 WRKY DNA-BINDING PROTEIN 45, WRKY
DNA-binding protein 45		 0.8 0.32 -0.33
38 AT5G06260 TLD-domain containing nucleolar protein 0.8 0.29 -0.31
39 AT5G54940 Translation initiation factor SUI1 family protein 0.8 0.32 -0.34
40 AT1G02305 Cysteine proteinases superfamily protein 0.8 0.31 -0.31
41 AT2G29450 glutathione S-transferase tau 5 AT103-1A, ARABIDOPSIS THALIANA
GLUTATHIONE S-TRANSFERASE TAU 1,
glutathione S-transferase tau 5,
glutathione S-transferase tau 5		 0.8 0.31 -0.32
42 AT1G52890 NAC domain containing protein 19 NAC domain containing protein 19,
NAC domain containing protein 19		 0.8 0.32 -0.32
43 AT3G03990 alpha/beta-Hydrolases superfamily protein 0.8 0.31 -0.33
44 AT3G60130 beta glucosidase 16 beta glucosidase 16 0.8 0.29 -0.29
45 AT5G56040 Leucine-rich receptor-like protein kinase family protein -0.79 0.33 -0.3
46 AT3G10310 P-loop nucleoside triphosphate hydrolases superfamily
protein with CH (Calponin Homology) domain		 -0.79 0.33 -0.35
47 AT1G60390 polygalacturonase 1 polygalacturonase 1 -0.79 0.29 -0.32
48 AT5G60620 glycerol-3-phosphate acyltransferase 9 glycerol-3-phosphate
acyltransferase 9		 0.79 0.3 -0.32
49 AT3G54260 TRICHOME BIREFRINGENCE-LIKE 36 TRICHOME BIREFRINGENCE-LIKE 36 -0.79 0.29 -0.34
50 AT5G43940 GroES-like zinc-binding dehydrogenase family protein ALCOHOL DEHYDROGENASE 2, ATGSNOR1,
S-NITROSOGLUTATHIONE REDUCTASE,
sensitive to hot temperatures 5,
PARAQUAT RESISTANT 2		 0.79 0.31 -0.3
51 AT3G56480 myosin heavy chain-related -0.79 0.33 -0.32
52 AT5G56180 actin-related protein 8 ARP8, actin-related protein 8,
actin-related protein 8		 0.79 0.3 -0.31
53 AT1G28290 arabinogalactan protein 31 arabinogalactan protein 31 -0.79 0.32 -0.33
54 AT2G05630 Ubiquitin-like superfamily protein ATG8D 0.79 0.3 -0.32
55 AT2G23090 Uncharacterised protein family SERF 0.79 0.32 -0.31
56 AT3G10920 manganese superoxide dismutase 1 ARABIDOPSIS MANGANESE SUPEROXIDE
DISMUTASE 1, MATERNAL EFFECT
EMBRYO ARREST 33, manganese
superoxide dismutase 1		 0.79 0.32 -0.31
57 AT1G03950 vacuolar protein sorting-associated protein 2.3 vacuolar protein
sorting-associated protein 2.3		 0.79 0.32 -0.32
58 AT1G10585 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.79 0.32 -0.31
59 AT4G29160 SNF7 family protein SNF7.1 0.78 0.32 -0.31
60 AT2G04160 Subtilisin-like serine endopeptidase family protein AUXIN-INDUCED IN ROOT CULTURES 3 0.78 0.34 -0.33
61 AT5G16830 syntaxin of plants 21 ATPEP12, ATSYP21, PEP12, PEP12P,
syntaxin of plants 21		 0.78 0.29 -0.33
62 AT2G43530 Scorpion toxin-like knottin superfamily protein 0.78 0.31 -0.31
63 AT5G48310 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G24610.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.78 0.31 -0.31
64 AT5G61530 small G protein family protein / RhoGAP family protein 0.78 0.32 -0.31
65 AT1G27530 CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating
enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-fold
modifier-conjugating enzyme 1 (InterPro:IPR014806); Has 269
Blast hits to 269 proteins in 110 species: Archae - 0;
Bacteria - 0; Metazoa - 175; Fungi - 0; Plants - 42;
Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink).		 0.78 0.33 -0.33
66 AT1G06400 Ras-related small GTP-binding family protein ARA-2, ARA2, ATRAB11E, ARABIDOPSIS
THALIANA RAB GTPASE HOMOLOG A1A		 0.78 0.32 -0.31
67 AT4G39540 shikimate kinase 2 ATSK2, shikimate kinase 2 0.78 0.32 -0.32
68 AT2G26180 IQ-domain 6 IQ-domain 6 -0.78 0.31 -0.34
69 AT4G38360 Protein of unknown function (DUF300) LAZARUS 1 0.78 0.33 -0.32
70 AT1G79590 syntaxin of plants 52 ATSYP52, syntaxin of plants 52 0.78 0.29 -0.32
71 AT1G13170 OSBP(oxysterol binding protein)-related protein 1D OSBP(oxysterol binding
protein)-related protein 1D		 -0.77 0.31 -0.33
72 AT3G63440 cytokinin oxidase/dehydrogenase 6 CYTOKININ OXIDASE 6, ATCKX7,
cytokinin oxidase/dehydrogenase 6		 -0.77 0.32 -0.33
73 AT4G02370 Protein of unknown function, DUF538 0.77 0.33 -0.32
74 AT1G70710 glycosyl hydrolase 9B1 glycosyl hydrolase 9B1, CELLULASE
1, glycosyl hydrolase 9B1		 -0.77 0.32 -0.32
75 AT1G06570 phytoene desaturation 1 4-hydroxyphenylpyruvate
dioxygenase,
4-hydroxyphenylpyruvate
dioxygenase, phytoene desaturation
1		 0.77 0.3 -0.31
76 AT5G64560 magnesium transporter 9 ATMGT9, magnesium transporter 9,
MRS2-2		 0.77 0.32 -0.3
77 AT2G34680 Outer arm dynein light chain 1 protein AUXIN-INDUCED IN ROOT CULTURES 9 -0.77 0.33 -0.31
78 AT4G27990 YGGT family protein ATYLMG1-2, YLMG1-2 0.77 0.29 -0.31
79 AT4G25000 alpha-amylase-like alpha-amylase-like, ATAMY1 0.77 0.34 -0.32
80 AT1G32790 CTC-interacting domain 11 CTC-interacting domain 11 0.77 0.32 -0.31
81 AT2G24860 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0.77 0.32 -0.31
82 AT5G42980 thioredoxin 3 thioredoxin H-type 3, thioredoxin
3, ATTRXH3, thioredoxin 3,
THIOREDOXIN H3		 0.77 0.33 -0.35
83 AT2G31800 Integrin-linked protein kinase family 0.77 0.31 -0.32
84 AT4G13990 Exostosin family protein -0.77 0.31 -0.3
85 AT5G42300 ubiquitin-like protein 5 ubiquitin-like protein 5 0.77 0.33 -0.3
86 AT5G54670 kinesin 3 kinesin 3, KINESIN-LIKE PROTEIN IN
ARABIDOPSIS THALIANA C		 -0.77 0.3 -0.32
87 AT5G65700 Leucine-rich receptor-like protein kinase family protein BARELY ANY MERISTEM 1 -0.76 0.3 -0.34
88 AT4G37490 CYCLIN B1;1 CYCLIN 1, CYCB1, CYCLIN B1;1 -0.76 0.31 -0.32
89 AT1G63480 AT hook motif DNA-binding family protein -0.76 0.31 -0.32
90 AT1G64390 glycosyl hydrolase 9C2 glycosyl hydrolase 9C2, glycosyl
hydrolase 9C2		 -0.76 0.33 -0.33
91 AT1G74690 IQ-domain 31 IQ-domain 31 -0.76 0.31 -0.32
92 AT5G56580 MAP kinase kinase 6 ARABIDOPSIS NQK1, ARABIDOPSIS
THALIANA MAP KINASE KINASE 6, MAP
kinase kinase 6		 -0.75 0.3 -0.33
93 AT3G18630 uracil dna glycosylase uracil dna glycosylase, uracil dna
glycosylase		 -0.75 0.3 -0.3
94 AT2G34190 Xanthine/uracil permease family protein -0.75 0.31 -0.31
95 AT5G66310 ATP binding microtubule motor family protein -0.75 0.33 -0.31
96 AT5G06940 Leucine-rich repeat receptor-like protein kinase family
protein		 -0.75 0.31 -0.31
97 AT3G22790 Kinase interacting (KIP1-like) family protein -0.75 0.35 -0.3
98 AT5G25580 BEST Arabidopsis thaliana protein match is: DDT domain
superfamily (TAIR:AT1G18950.1); Has 178 Blast hits to 178
proteins in 75 species: Archae - 0; Bacteria - 4; Metazoa -
51; Fungi - 33; Plants - 60; Viruses - 1; Other Eukaryotes
- 29 (source: NCBI BLink).		 -0.74 0.33 -0.31
99 AT4G14200 Pentatricopeptide repeat (PPR) superfamily protein -0.74 0.3 -0.33
100 AT1G50240 Protein kinase family protein with ARM repeat domain FUSED -0.74 0.35 -0.31
101 AT2G11910 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast envelope; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 92883 Blast hits to
31060 proteins in 1576 species: Archae - 765; Bacteria -
32670; Metazoa - 21164; Fungi - 12252; Plants - 4238;
Viruses - 1282; Other Eukaryotes - 20512 (source: NCBI
BLink).		 -0.74 0.31 -0.32
102 AT3G20260 Protein of unknown function (DUF1666) -0.74 0.33 -0.3
103 AT5G37020 auxin response factor 8 auxin response factor 8, ATARF8 -0.73 0.35 -0.33
104 AT3G06030 NPK1-related protein kinase 3 NPK1-related protein kinase 3,
AtANP3, MAPKKK12, NPK1-related
protein kinase 3		 -0.73 0.32 -0.33
105 AT3G03130 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G17160.1); Has 7130 Blast hits
to 3690 proteins in 504 species: Archae - 22; Bacteria -
2666; Metazoa - 1654; Fungi - 721; Plants - 246; Viruses -
56; Other Eukaryotes - 1765 (source: NCBI BLink).		 -0.73 0.31 -0.3
106 AT1G64405 unknown protein; Has 13 Blast hits to 13 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.73 0.33 -0.31
107 AT2G38810 histone H2A 8 histone H2A 8 -0.73 0.33 -0.32
108 AT5G01910 unknown protein; Has 66 Blast hits to 66 proteins in 27
species: Archae - 0; Bacteria - 2; Metazoa - 18; Fungi - 7;
Plants - 29; Viruses - 0; Other Eukaryotes - 10 (source:
NCBI BLink).		 -0.73 0.28 -0.33
109 AT2G28250 Protein kinase superfamily protein NCRK -0.73 0.33 -0.33
110 AT1G30600 Subtilase family protein -0.73 0.33 -0.31
111 AT1G79760 downstream target of AGL15-4 downstream target of AGL15-4 -0.72 0.32 -0.29
112 AT4G24790 AAA-type ATPase family protein -0.72 0.29 -0.31
113 AT4G29080 phytochrome-associated protein 2 indole-3-acetic acid inducible 27,
phytochrome-associated protein 2		 -0.72 0.31 -0.29
114 AT1G73620 Pathogenesis-related thaumatin superfamily protein -0.72 0.32 -0.32
115 AT3G56870 unknown protein; Has 204 Blast hits to 201 proteins in 58
species: Archae - 0; Bacteria - 10; Metazoa - 72; Fungi -
8; Plants - 41; Viruses - 0; Other Eukaryotes - 73 (source:
NCBI BLink).		 -0.72 0.3 -0.31
116 AT4G26660 INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED
DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s:
Kinesin-related protein (InterPro:IPR010544); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G55520.2); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.72 0.32 -0.33
117 AT3G23890 topoisomerase II ATTOPII, topoisomerase II -0.72 0.31 -0.34
118 AT4G11450 Protein of unknown function (DUF3527) -0.71 0.33 -0.31
119 AT2G21050 like AUXIN RESISTANT 2 like AUXIN RESISTANT 2 -0.71 0.3 -0.32
120 AT1G77470 replication factor C subunit 3 EMBRYO DEFECTIVE 2810, replication
factor C subunit 3, replication
factor C 5		 -0.71 0.32 -0.33
121 AT1G77720 putative protein kinase 1 putative protein kinase 1 -0.71 0.31 -0.3
122 AT1G18370 ATP binding microtubule motor family protein ARABIDOPSIS NPK1-ACTIVATING
KINESIN 1, HINKEL, NPK1-ACTIVATING
KINESIN 1		 -0.71 0.33 -0.32
123 AT5G15580 longifolia1 LONGIFOLIA1 -0.71 0.33 -0.3
124 AT1G73640 RAB GTPase homolog A6A RAB GTPase homolog A6A, RAB GTPase
homolog A6A		 -0.71 0.31 -0.35
125 AT2G36730 Pentatricopeptide repeat (PPR) superfamily protein -0.71 0.33 -0.3
126 AT1G59540 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ZCF125 -0.71 0.31 -0.32
127 AT5G48360 Actin-binding FH2 (formin homology 2) family protein -0.7 0.3 -0.31
128 AT2G03090 expansin A15 ATEXP15, expansin A15, ATHEXP
ALPHA 1.3, EXPANSIN 15, expansin
A15		 -0.7 0.31 -0.31
129 AT5G13290 Protein kinase superfamily protein CORYNE, SUPPRESSOR OF LLP1 2 -0.7 0.32 -0.33
130 AT5G43020 Leucine-rich repeat protein kinase family protein -0.7 0.33 -0.33
131 AT1G54200 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G13980.1); Has 1084 Blast hits
to 581 proteins in 136 species: Archae - 0; Bacteria - 72;
Metazoa - 212; Fungi - 78; Plants - 102; Viruses - 0; Other
Eukaryotes - 620 (source: NCBI BLink).		 -0.69 0.33 -0.29
132 AT5G20540 BREVIS RADIX-like 4 BREVIS RADIX-like 4, BRX-LIKE4,
BREVIS RADIX-like 4		 -0.69 0.32 -0.34
133 AT4G02680 ETO1-like 1 ETO1-like 1 -0.69 0.29 -0.34
134 AT1G11280 S-locus lectin protein kinase family protein -0.69 0.31 -0.31
135 AT1G53300 tetratricopetide-repeat thioredoxin-like 1 tetratricopetide-repeat
thioredoxin-like 1		 -0.69 0.33 -0.31
136 AT5G18620 chromatin remodeling factor17 chromatin remodeling factor17 -0.69 0.34 -0.32
137 AT3G63200 PATATIN-like protein 9 PLA IIIB, PATATIN-like protein 9 -0.69 0.3 -0.31
138 AT1G21090 Cupredoxin superfamily protein -0.69 0.32 -0.31
139 AT5G10800 RNA recognition motif (RRM)-containing protein -0.69 0.3 -0.34
140 AT3G22780 Tesmin/TSO1-like CXC domain-containing protein ATTSO1, CHINESE FOR 'UGLY' -0.69 0.31 -0.31
141 AT1G70940 Auxin efflux carrier family protein ARABIDOPSIS PIN-FORMED 3,
PIN-FORMED 3		 -0.69 0.31 -0.29
142 AT4G02290 glycosyl hydrolase 9B13 glycosyl hydrolase 9B13, glycosyl
hydrolase 9B13		 -0.69 0.34 -0.31